Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 7.6e-166 587.4 370 100.0
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 8.3e-88 328.2 369 63.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.8e-87 327.0 309 71.8
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 2.7e-86 323.2 374 66.3
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.1e-84 317.8 309 68.9
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 9.5e-84 314.7 322 68.9
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 2.1e-83 313.5 374 60.2
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 8.9e-82 308.1 309 72.8
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 4.4e-81 305.8 309 69.3
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 2.9e-80 303.1 316 70.6
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 8.3e-80 301.6 370 63.8
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 1.6e-78 297.4 320 70.0
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 3.5e-78 296.2 376 60.1
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 3.5e-78 296.2 309 68.0
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.7e-77 293.9 374 60.4
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 1.7e-77 293.9 375 60.3
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.5e-76 290.0 340 63.2
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 3.3e-76 289.7 309 67.0
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 5.6e-76 288.9 369 61.5
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 2.1e-75 287.0 371 59.3
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 6.2e-75 285.4 374 58.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 6.2e-75 285.4 374 61.8
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 1.1e-74 284.6 342 65.2
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 2.6e-73 280.0 309 68.6
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 5.8e-73 278.9 309 64.7
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 9.8e-73 278.1 309 66.7
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 1.3e-72 277.7 309 67.0
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.2e-72 276.9 318 65.7
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 2.2e-72 276.9 316 62.3
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 3.7e-72 276.2 320 64.7
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 4.9e-72 275.8 309 66.0
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 6.4e-72 275.4 376 59.3
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 5.4e-71 272.3 329 66.0
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.2e-70 271.2 367 59.9
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 2.7e-70 270.0 320 64.4
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 4.6e-70 269.2 300 67.7
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 6.0e-70 268.9 311 61.4
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.7e-69 267.3 309 68.3
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 5.1e-69 265.8 314 66.2
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 5.1e-69 265.8 349 59.6
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.1e-66 258.1 239 74.5
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 5.2e-66 255.8 319 66.5
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.2e-65 254.6 321 64.8
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.6e-65 253.4 450 37.3
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 2.2e-64 250.4 312 62.5
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 6.4e-64 248.8 368 57.6
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 8.4e-64 248.4 376 54.5
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 8.4e-64 248.4 320 65.3
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.9e-63 247.3 320 65.3
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 5.4e-63 245.7 334 61.1
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 1.6e-62 244.2 309 66.3
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.6e-62 244.2 320 64.7
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.6e-62 244.2 320 64.7
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 3.5e-62 243.0 309 63.4
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.0e-61 241.5 374 54.0
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.9e-60 237.3 309 62.8
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.9e-60 237.3 237 73.0
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 5.6e-60 235.7 376 55.3
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 7.3e-60 235.3 354 59.6
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 7.3e-60 235.3 309 63.1
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 8.1e-59 231.9 302 62.9
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 8.9e-58 228.4 321 57.6
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 2.6e-57 226.9 300 43.7
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 5.8e-57 225.7 329 42.9
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 2.9e-56 223.4 359 57.1
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.4e-56 222.2 319 59.6
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.1e-55 221.5 298 61.1
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 3.5e-54 216.5 284 62.3
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 7.6e-49 198.7 132 76.5
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 2.7e-46 190.3 322 46.9
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 6.0e-46 189.1 376 50.3
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.7e-45 187.6 238 66.8
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 3.0e-45 186.8 314 55.4
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.1e-42 178.3 376 49.2
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.4e-42 177.9 369 33.6
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.8e-42 177.6 261 61.3
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 3.1e-42 176.8 261 61.7
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.0e-41 174.1 309 56.0
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.4e-39 167.9 132 62.9
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 1.8e-37 161.0 119 69.7
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.8e-37 161.0 119 63.0
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 3.3e-36 156.8 132 59.1
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.3e-36 156.8 133 60.2
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.8e-35 152.9 100 72.0
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 3.1e-34 150.2 226 61.9
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.0e-33 147.5 121 60.3
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 6.7e-29 132.5 132 53.8
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 3.8e-24 116.7 112 51.8
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 5.0e-24 116.3 119 55.5
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 7.2e-23 112.5 86 66.3
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 3.5e-22 110.2 166 38.0
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.5e-22 110.2 193 50.3
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 6.1e-22 109.4 120 45.0
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 6.3e-19 99.4 66 63.6
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.6e-17 94.0 80 58.8
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 7.2e-15 85.9 157 69.4
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.1e-12 78.6 100 43.0
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 5.7e-12 76.3 68 55.9
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 7.4e-12 75.9 108 40.7
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 2.4e-10 70.9 45 75.6
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.5e-09 68.2 42 78.6
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 7.7e-09 65.9 48 64.6
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 2.9e-08 63.9 73 49.3


User provided reference genes

Program Settings