Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 8.8e-235 816.6 425 100.0
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.9e-193 677.9 400 88.0
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 6.4e-193 677.6 413 85.2
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.6e-191 671.4 400 87.0
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.0e-190 670.2 411 83.9
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 6.6e-190 667.5 396 84.1
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 6.6e-190 667.5 371 91.1
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.5e-189 666.4 396 84.1
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 1.9e-189 666.0 390 87.7
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 3.3e-189 665.2 377 89.4
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 5.6e-189 664.5 419 80.7
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 7.3e-189 664.1 394 86.5
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 9.6e-189 663.7 377 88.6
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 2.1e-188 662.5 383 88.5
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 4.7e-188 661.4 387 87.6
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 4.7e-188 661.4 390 85.9
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.1e-187 660.2 415 81.4
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.1e-187 660.2 417 82.7
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 1.1e-187 660.2 417 82.7
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.4e-187 659.8 400 85.5
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.1e-187 658.7 429 81.4
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 4.0e-187 658.3 387 87.3
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 5.2e-187 657.9 379 89.4
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 5.2e-187 657.9 437 77.3
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 9.0e-187 657.1 407 81.6
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.5e-186 656.4 427 82.4
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.0e-186 656.0 389 86.6
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 2.0e-186 656.0 438 79.9
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 2.0e-186 656.0 440 78.6
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 2.6e-186 655.6 423 82.7
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 5.8e-186 654.4 429 79.7
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 5.8e-186 654.4 391 83.4
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.3e-185 653.3 417 81.8
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.3e-185 653.3 391 85.9
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 1.7e-185 652.9 365 91.0
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 1.7e-185 652.9 438 79.5
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.7e-185 652.9 391 83.1
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.7e-185 652.9 391 85.2
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 2.2e-185 652.5 434 77.0
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 2.9e-185 652.1 369 87.3
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 3.8e-185 651.7 433 81.1
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 4.9e-185 651.4 387 86.0
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 6.4e-185 651.0 370 89.2
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 8.4e-185 650.6 370 88.1
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 8.4e-185 650.6 379 87.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 8.4e-185 650.6 415 80.5
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.1e-184 650.2 424 79.7
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 3.2e-184 648.7 384 86.2
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 9.3e-184 647.1 417 81.8
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 1.6e-183 646.4 420 81.2
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 2.1e-183 646.0 382 83.8
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.6e-183 644.8 416 81.5
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 6.0e-183 644.4 415 80.5
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.7e-182 642.9 370 86.8
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 1.7e-182 642.9 370 86.8
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 3.0e-182 642.1 424 79.0
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 3.0e-182 642.1 423 79.7
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 3.0e-182 642.1 391 84.1
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 3.9e-182 641.7 427 80.3
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 6.6e-182 641.0 370 86.5
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 8.7e-182 640.6 418 80.9
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.9e-181 639.4 403 80.1
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 1.9e-181 639.4 389 86.1
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 5.6e-181 637.9 372 87.1
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 5.6e-181 637.9 390 84.9
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.6e-180 635.2 371 85.4
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 3.6e-180 635.2 415 80.5
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 4.8e-180 634.8 387 80.6
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 4.8e-180 634.8 422 80.3
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 1.4e-179 633.3 365 88.8
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 2.4e-179 632.5 441 77.8
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 3.1e-179 632.1 365 87.7
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 9.0e-179 630.6 394 83.8
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.5e-178 629.8 365 88.8
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 1.5e-178 629.8 365 88.8
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 2.6e-178 629.0 392 83.2
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 2.6e-178 629.0 392 83.2
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 5.8e-178 627.9 329 92.7
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 7.6e-178 627.5 412 80.3
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 2.9e-177 625.5 438 77.6
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 6.4e-177 624.4 388 83.8
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 6.4e-177 624.4 336 89.9
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.9e-176 622.9 400 82.5
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 2.4e-176 622.5 382 84.0
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 3.2e-176 622.1 393 81.7
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 9.3e-176 620.5 393 82.4
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.6e-175 619.8 371 86.3
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.6e-175 619.8 371 86.0
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 1.6e-175 619.8 364 87.9
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 6.0e-175 617.8 422 78.7
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.0e-175 617.8 422 78.7
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 1.0e-174 617.1 371 85.7
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 1.3e-174 616.7 419 74.9
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 5.1e-174 614.8 365 86.0
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 6.7e-174 614.4 364 86.0
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 9.6e-173 610.5 390 81.0
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 2.0e-170 602.8 387 78.3
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 7.6e-170 600.9 360 82.5
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.3e-169 600.1 384 81.0
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 4.2e-168 595.1 360 81.4
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 7.9e-167 590.9 390 76.7
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 1.8e-166 589.7 402 72.4
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 8.7e-166 587.4 314 89.8
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.1e-163 580.5 391 79.0
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.4e-163 580.1 388 73.5
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 1.8e-163 579.7 392 77.8
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 3.1e-163 578.9 392 77.8
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 5.8e-162 574.7 360 78.1
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 5.8e-162 574.7 397 71.5
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 4.9e-161 571.6 434 70.3
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 3.2e-160 568.9 400 71.0
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.1e-159 566.2 379 80.5
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 4.3e-157 558.5 387 72.4
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.1e-147 527.3 328 79.3
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.7e-145 520.0 382 70.2
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 2.2e-145 519.6 283 89.4
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 3.2e-144 515.8 371 75.5
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 4.8e-140 501.9 339 73.2
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.8e-140 501.9 336 73.8
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.5e-138 496.9 413 64.4
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.5e-138 496.9 338 72.5
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.5e-138 496.9 330 73.9
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.4e-138 495.7 330 74.2
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 7.2e-136 488.0 413 64.2
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-135 487.3 336 71.7
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 1.2e-135 487.3 336 71.7
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.2e-135 487.3 336 71.7
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 3.9e-134 482.3 338 70.7
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 2.0e-133 479.9 338 70.4
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 2.6e-133 479.6 294 82.7
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 2.4e-131 473.0 268 85.8
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 4.5e-130 468.8 395 67.1
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 1.4e-123 447.2 304 77.6
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 2.9e-121 439.5 339 62.8
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 6.5e-121 438.3 344 61.0
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 4.8e-116 422.2 312 67.6
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.5e-112 410.6 282 71.6
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 1.2e-111 407.5 324 70.4
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 5.7e-109 398.7 224 87.9
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.6e-103 380.6 307 67.4
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 1.9e-88 330.5 221 78.7
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.2e-74 284.6 234 64.5
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.6e-74 282.7 193 73.1
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 9.9e-69 265.0 249 57.4
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.4e-62 244.6 276 49.3
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.6e-58 229.6 278 49.3
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 3.9e-57 226.5 139 77.0
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 1.6e-55 221.1 187 59.4
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.5e-53 214.5 187 58.3
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.4e-51 208.0 311 39.9
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.4e-46 191.4 148 68.2
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 9.0e-46 188.7 101 87.1
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.0e-45 187.6 183 53.0
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.3e-44 184.9 100 89.0
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 8.4e-44 182.2 101 84.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 8.4e-44 182.2 104 85.6
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 2.1e-42 177.6 176 60.2
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 2.1e-42 177.6 168 55.4
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.6e-39 167.9 100 80.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 1.2e-37 161.8 183 49.2
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.0e-36 158.7 77 94.8
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 2.5e-35 154.1 212 39.6
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 4.2e-35 153.3 122 68.0
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.8e-33 147.9 76 86.8
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 8.8e-33 145.6 135 60.0
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.0e-29 134.4 72 91.7
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 8.2e-23 112.5 76 73.7
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 5.0e-20 103.2 106 54.7
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 6.3e-15 86.3 186 33.9
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 7.0e-14 82.8 78 64.1
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 7.0e-14 82.8 78 64.1
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 1.0e-12 79.0 49 79.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.2e-12 77.8 53 69.8
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.0e-09 67.0 36 88.9
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 1.2e-08 65.5 59 61.0


User provided reference genes

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