Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016677 Daucus carota HOM05D001181 ORTHO05D007712 2.2e-70 268.9 137 100.0
Migut.N03357 Erythranthe guttata HOM05D001181 ORTHO05D007712 1.0e-35 153.7 143 60.8
Lj7A623G47 Lonicera japonica HOM05D001181 ORTHO05D007712 3.0e-35 152.1 126 64.3
Dinv41779 Davidia involucrata HOM05D001181 ORTHO05D007712 1.3e-33 146.7 120 65.8
Rhsim02G0204900 Rhododendron simsii HOM05D001181 ORTHO05D007712 1.3e-33 146.7 137 58.4
CSS0039143 Camellia sinensis var. sinensis HOM05D001181 ORTHO05D007712 1.7e-33 146.4 119 64.7
Lsat_1_v5_gn_5_67120 Lactuca sativa HOM05D001181 ORTHO05D007712 1.7e-33 146.4 126 62.7
vmacro11202 Vaccinium macrocarpon HOM05D001181 ORTHO05D007712 4.1e-32 141.7 132 59.8
Nitab4.5_0000167g0200 Nicotiana tabacum HOM05D001181 ORTHO05D007712 7.0e-32 141.0 119 61.3
Nitab4.5_0001579g0040 Nicotiana tabacum HOM05D001181 ORTHO05D007712 7.0e-32 141.0 119 61.3
Thecc.09G289200 Theobroma cacao HOM05D001181 ORTHO05D007712 7.0e-32 141.0 119 64.7
Atru.chr13.2345 Acer truncatum HOM05D001181 ORTHO05D007712 2.0e-31 139.4 132 59.1
CAN.G202.8 Capsicum annuum HOM05D001181 ORTHO05D007712 2.0e-31 139.4 119 60.5
Peaxi162Scf01013g00239 Petunia axillaris HOM05D001181 ORTHO05D007712 2.0e-31 139.4 143 53.8
Solyc11g020060.2 Solanum lycopersicum HOM05D001181 ORTHO05D007712 2.0e-31 139.4 142 55.6
Sopen11g010190 Solanum pennellii HOM05D001181 ORTHO05D007712 2.0e-31 139.4 142 55.6
Actinidia22321 Actinidia chinensis HOM05D001181 ORTHO05D007712 2.6e-31 139.0 119 61.3
HanXRQChr12g0382121 Helianthus annuus HOM05D001181 ORTHO05D007712 4.5e-31 138.3 119 61.3
Cc10_g11160 Coffea canephora HOM05D001181 ORTHO05D007712 5.9e-31 137.9 137 55.5
Eucgr.F04070 Eucalyptus grandis HOM05D001181 ORTHO05D007712 1.0e-30 137.1 132 59.1
Duzib150G0834 Durio zibethinus HOM05D001181 ORTHO05D007712 1.3e-30 136.7 140 57.1
Ciclev10020311m.g Citrus clementina HOM05D001181 ORTHO05D007712 2.2e-30 136.0 133 57.9
ECA233G5758 Erigeron canadensis HOM05D001181 ORTHO05D007712 2.2e-30 136.0 119 61.3
COL.COLO4_19948 Corchorus olitorius HOM05D001181 ORTHO05D007712 2.9e-30 135.6 119 63.0
Gohir.A05G082900 Gossypium hirsutum HOM05D001181 ORTHO05D007712 2.9e-30 135.6 119 60.5
Sopen06g023790 Solanum pennellii HOM05D001181 ORTHO05D007712 5.0e-30 134.8 119 57.1
MSTRG.22461 Avicennia marina HOM05D001181 ORTHO05D007712 8.5e-30 134.0 119 62.2
Lalb_Chr15g0080101 Lupinus albus HOM05D001181 ORTHO05D007712 1.1e-29 133.7 119 62.2
GSVIVG01025950001 Vitis vinifera HOM05D001181 ORTHO05D007712 1.1e-29 133.7 119 63.0
Ca_14160_v3 Cicer arietinum L. HOM05D001181 ORTHO05D007712 1.4e-29 133.3 119 60.5
Gohir.D05G085800 Gossypium hirsutum HOM05D001181 ORTHO05D007712 1.9e-29 132.9 145 51.7
Gorai.009G087500 Gossypium raimondii HOM05D001181 ORTHO05D007712 1.9e-29 132.9 145 51.7
MD08G1217300 Malus domestica HOM05D001181 ORTHO05D007712 2.5e-29 132.5 144 55.6
PGR083G1668 Punica granatum HOM05D001181 ORTHO05D007712 2.5e-29 132.5 119 61.3
THA.LOC104810629 Tarenaya hassleriana HOM05D001181 ORTHO05D007712 2.5e-29 132.5 119 62.2
Prupe.1G556800 Prunus persica HOM05D001181 ORTHO05D007712 3.2e-29 132.1 148 53.4
CiPaw.07G234300 Carya illinoinensis HOM05D001181 ORTHO05D007712 4.2e-29 131.7 137 52.6
CARHR065050 Cardamine hirsuta HOM05D001181 ORTHO05D007712 5.5e-29 131.3 123 59.3
CDE07G1631 Ceratophyllum demersum HOM05D001181 ORTHO05D007712 5.5e-29 131.3 122 59.8
Potri.013G104200 Populus trichocarpa HOM05D001181 ORTHO05D007712 5.5e-29 131.3 119 61.3
FAN18G0918 Fragaria x ananassa HOM05D001181 ORTHO05D007712 7.2e-29 131.0 133 54.1
TAR376G0611 Trochodendron aralioides HOM05D001181 ORTHO05D007712 7.2e-29 131.0 119 61.3
Thhalv10018793m.g Eutrema salsugineum HOM05D001181 ORTHO05D007712 9.4e-29 130.6 119 59.7
RcHm_v2.0_Chr7g0226521 Rosa chinensis HOM05D001181 ORTHO05D007712 9.4e-29 130.6 119 59.7
HanXRQChr09g0262621 Helianthus annuus HOM05D001181 ORTHO05D007712 1.2e-28 130.2 118 58.5
VMungo1080G0499 Vigna mungo HOM05D001181 ORTHO05D007712 1.2e-28 130.2 119 60.5
FAN13G0428 Fragaria x ananassa HOM05D001181 ORTHO05D007712 1.6e-28 129.8 119 58.8
Manes.02G199700 Manihot esculenta HOM05D001181 ORTHO05D007712 1.6e-28 129.8 119 59.7
TAR628G1015 Trochodendron aralioides HOM05D001181 ORTHO05D007712 1.6e-28 129.8 119 60.5
Aqoxy6G02411 Aquilegia oxysepala HOM05D001181 ORTHO05D007712 2.1e-28 129.4 119 56.3
Cpa.g.sc177.21 Carica papaya HOM05D001181 ORTHO05D007712 2.1e-28 129.4 119 59.7
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 2.1e-28 129.4 142 50.0
FvH4_5g31330 Fragaria vesca HOM05D001181 ORTHO05D007712 2.7e-28 129.0 118 59.3
PSO017G2270 Papaver somniferum HOM05D001181 ORTHO05D007712 2.7e-28 129.0 146 52.1
Phvul.005G002200 Phaseolus vulgaris HOM05D001181 ORTHO05D007712 2.7e-28 129.0 119 60.5
Sc01g0002050 Simmondsia chinensis HOM05D001181 ORTHO05D007712 2.7e-28 129.0 137 54.0
Thecc.09G289100 Theobroma cacao HOM05D001181 ORTHO05D007712 6.1e-28 127.9 119 59.7
arahy.Tifrunner.gnm1.ann1.53YFBS Arachis hypogaea HOM05D001181 ORTHO05D007712 8.0e-28 127.5 119 58.0
arahy.Tifrunner.gnm1.ann1.ASS065 Arachis hypogaea HOM05D001181 ORTHO05D007712 8.0e-28 127.5 119 58.0
AUR62004582 Chenopodium quinoa HOM05D001181 ORTHO05D007712 8.0e-28 127.5 144 52.1
Lj3g0016198 Lotus japonicus HOM05D001181 ORTHO05D007712 8.0e-28 127.5 119 58.8
Psat5g232400 Pisum sativum HOM05D001181 ORTHO05D007712 8.0e-28 127.5 136 55.9
Nn5g27453 Nelumbo nucifera HOM05D001181 ORTHO05D007712 1.0e-27 127.1 135 53.3
Medtr3g005970 Medicago truncatula HOM05D001181 ORTHO05D007712 1.8e-27 126.3 119 56.3
Duzib170G0484 Durio zibethinus HOM05D001181 ORTHO05D007712 2.3e-27 125.9 119 58.0
Glyma.04G110700 Glycine max HOM05D001181 ORTHO05D007712 3.0e-27 125.6 140 54.3
SGA_v2.0_scaffold56G20007 Striga asiatica HOM05D001181 ORTHO05D007712 3.0e-27 125.6 138 52.9
CANSAT25G0440 Cannabis sativa HOM05D001181 ORTHO05D007712 3.9e-27 125.2 129 55.0
AUR62023528 Chenopodium quinoa HOM05D001181 ORTHO05D007712 3.9e-27 125.2 144 51.4
Sp5g27280 Schrenkiella parvula HOM05D001181 ORTHO05D007712 5.2e-27 124.8 119 57.1
CSS0017991 Camellia sinensis var. sinensis HOM05D001181 ORTHO05D007712 6.7e-27 124.4 118 58.5
CSS0031569 Camellia sinensis var. sinensis HOM05D001181 ORTHO05D007712 6.7e-27 124.4 118 58.5
PSO170G0801 Papaver somniferum HOM05D001181 ORTHO05D007712 1.1e-26 123.6 146 50.0
Sed0016515 Sechium edule HOM05D001181 ORTHO05D007712 1.1e-26 123.6 135 53.3
TPR.G25511 Trifolium pratense HOM05D001181 ORTHO05D007712 2.6e-26 122.5 119 55.5
Aa31LG4G8370 Aethionema arabicum HOM05D001181 ORTHO05D007712 3.3e-26 122.1 123 54.5
AT1G72190 Arabidopsis thaliana HOM05D001181 ORTHO05D007712 7.4e-26 120.9 119 56.3
TWI59G0211 Tripterygium wilfordii HOM05D001181 ORTHO05D007712 7.4e-26 120.9 119 57.1
EL10Ac1g00154 Beta vulgaris HOM05D001181 ORTHO05D007712 2.2e-25 119.4 131 52.7
ClCG09G010140 Citrullus lanatus HOM05D001181 ORTHO05D007712 2.2e-25 119.4 120 53.3
MELO3C024090.2 Cucumis melo HOM05D001181 ORTHO05D007712 2.2e-25 119.4 126 52.4
Sabra13G0090100 Salix brachista HOM05D001181 ORTHO05D007712 2.2e-25 119.4 150 51.3
CsaV3_7G024600 Cucumis sativus L. HOM05D001181 ORTHO05D007712 6.3e-25 117.9 126 51.6
Os07g0264100 Oryza sativa ssp. japonica HOM05D001181 ORTHO05D007712 8.2e-25 117.5 119 52.9
RcHm_v2.0_Chr7g0226551 Rosa chinensis HOM05D001181 ORTHO05D007712 1.1e-24 117.1 119 53.8
Zm00001eb097200 Zea mays HOM05D001181 ORTHO05D007712 1.1e-24 117.1 138 49.3
AL2G31860 Arabidopsis lyrata HOM05D001181 ORTHO05D007712 1.4e-24 116.7 119 54.6
Ah.05g178750 Amaranthus hybridus HOM05D001181 ORTHO05D007712 1.8e-24 116.3 138 49.3
ATR1136G036 Amborella trichopoda HOM05D001181 ORTHO05D007712 2.4e-24 115.9 148 47.3
Carub.0002s1900 Capsella rubella HOM05D001181 ORTHO05D007712 5.3e-24 114.8 118 55.1
BcaB03g15655 Brassica carinata HOM05D001181 ORTHO05D007712 9.1e-24 114.0 119 53.8
BcaC08g45721 Brassica carinata HOM05D001181 ORTHO05D007712 9.1e-24 114.0 119 53.8
Pp3c5_20110 Physcomitrium patens HOM05D001181 ORTHO05D007712 2.6e-23 112.5 140 47.9
A07p30310 Brassica napus HOM05D001181 ORTHO05D007712 4.5e-23 111.7 141 46.8
BraA07t30668Z Brassica rapa HOM05D001181 ORTHO05D007712 4.5e-23 111.7 141 46.8
C06p35060 Brassica napus HOM05D001181 ORTHO05D007712 5.9e-23 111.3 119 52.9
BolC6t38610H Brassica oleracea HOM05D001181 ORTHO05D007712 5.9e-23 111.3 119 52.9
SEGI_12091 Sequoiadendron giganteum HOM05D001181 ORTHO05D007712 7.7e-23 110.9 127 48.8
HPP92_003713 Vanilla planifolia HOM05D001181 ORTHO05D007712 8.5e-22 107.5 119 50.4
Pp3c16_19100 Physcomitrium patens HOM05D001181 ORTHO05D007712 4.2e-21 105.1 126 48.4
PGSC0003DMG400027624 Solanum tuberosum HOM05D001181 ORTHO05D007712 9.4e-21 104.0 91 61.5
Hund16765 Selenicereus undatus HOM05D001181 ORTHO05D007712 2.1e-20 102.8 93 61.3
unitig_21.g20247 Utricularia gibba HOM05D001181 ORTHO05D007712 2.7e-20 102.4 86 64.0
ATR1136G151 Amborella trichopoda HOM05D001181 ORTHO05D007712 3.6e-20 102.1 119 49.6
QL02p023588 Quercus lobata HOM05D001181 ORTHO05D007712 1.0e-19 100.5 92 58.7
AagrBONN_evm.TU.Sc2ySwM_362.1380 Anthoceros agrestis HOM05D001181 ORTHO05D007712 3.1e-16 89.0 120 42.5
Mapoly0015s0127 Marchantia polymorpha HOM05D001181 ORTHO05D007712 9.1e-16 87.4 148 44.6
Os07g0263400 Oryza sativa ssp. japonica HOM05D001181 ORTHO05D007712 2.2e-14 82.8 92 50.0
Hma1.2p1_2621F.1_g325590 Hydrangea macrophylla HOM05D001181 ORTHO05D007712 2.5e-13 79.3 72 63.9
Hma1.2p1_0942F.1_g239760 Hydrangea macrophylla HOM05D002302 ORTHO05D007712 1.2e-12 77.0 72 62.5
Hma1.2p1_1325F.1_g275740 Hydrangea macrophylla HOM05D001181 ORTHO05D007712 2.1e-12 76.3 69 63.8
Hma1.2p1_0158F.1_g069880 Hydrangea macrophylla HOM05D001181 ORTHO05D007712 3.4e-10 68.9 71 56.3
Peaxi162Scf01013g00230 Petunia axillaris HOM05D001181 ORTHO05D007712 3.4e-10 68.9 58 65.5
MCO12G354 Micromonas commoda HOM05D001181 ORTHO05D007712 4.5e-07 58.5 122 32.8
Haze_21348 Corylus avellana HOM05D001181 ORTHO05D007712 1.7e-06 56.6 63 52.4
Haze_21354 Corylus avellana HOM05D001181 ORTHO05D007712 1.7e-06 56.6 63 52.4
PRCOL_00002871 Prasinoderma coloniale HOM05D001181 ORTHO05D007712 6.6e-06 54.7 42 59.5


User provided reference genes

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