Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 1.8e-254 882.1 459 100.0
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 1.5e-187 659.8 457 73.5
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 2.4e-185 652.5 457 69.6
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 5.3e-185 651.4 459 73.2
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 6.9e-185 651.0 459 69.9
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 9.1e-185 650.6 459 70.6
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 2.0e-184 649.4 464 72.8
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 5.9e-184 647.9 459 70.2
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 2.2e-183 646.0 461 70.7
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 3.8e-183 645.2 459 71.5
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 3.8e-183 645.2 459 71.5
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 5.0e-183 644.8 459 71.5
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 6.5e-183 644.4 456 73.0
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 3.2e-182 642.1 459 68.0
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 4.2e-182 641.7 459 67.8
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 7.2e-182 641.0 464 70.9
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 1.6e-181 639.8 459 69.7
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 4.6e-181 638.3 463 70.4
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 6.1e-181 637.9 459 71.0
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 3.9e-180 635.2 460 69.8
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 3.3e-179 632.1 461 69.4
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 4.4e-179 631.7 459 68.4
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 4.4e-179 631.7 461 67.9
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 9.7e-179 630.6 460 72.2
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 9.7e-179 630.6 459 67.3
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 2.2e-178 629.4 459 68.0
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 2.8e-178 629.0 454 70.7
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 2.8e-178 629.0 459 69.3
PGSC0003DMG400018160 Solanum tuberosum HOM05D003532 ORTHO05D003298 4.8e-178 628.2 459 68.8
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 1.1e-177 627.1 459 69.5
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 1.1e-177 627.1 459 66.9
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 5.3e-177 624.8 459 67.8
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 6.9e-177 624.4 459 66.9
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 9.1e-177 624.0 457 68.1
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 1.2e-176 623.6 457 68.5
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 2.0e-176 622.9 457 69.6
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 4.5e-176 621.7 457 67.2
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 1.3e-175 620.2 457 67.0
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 2.9e-175 619.0 457 67.8
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 2.9e-175 619.0 467 69.4
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 5.5e-174 614.8 466 66.3
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 7.2e-174 614.4 457 66.1
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 9.4e-174 614.0 456 67.3
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 2.1e-173 612.8 462 66.0
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 2.7e-173 612.5 459 68.6
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 3.6e-173 612.1 457 67.4
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 3.6e-173 612.1 464 66.6
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 4.7e-173 611.7 463 66.3
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 6.1e-173 611.3 459 66.9
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 1.0e-172 610.5 459 68.4
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 1.0e-172 610.5 459 66.4
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 3.9e-172 608.6 460 68.0
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 8.8e-172 607.4 466 66.5
SalBow8G0547 Salvia bowleyana HOM05D003532 ORTHO05D003298 1.5e-171 606.7 462 68.2
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 4.4e-171 605.1 460 66.3
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 1.3e-170 603.6 462 66.2
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 8.2e-170 600.9 454 67.2
Ah.06g181150 Amaranthus hybridus HOM05D003532 ORTHO05D003298 2.4e-169 599.4 459 64.5
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 7.7e-168 594.3 464 65.5
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 2.5e-166 589.3 460 65.7
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 3.2e-166 589.0 463 64.4
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 4.2e-166 588.6 459 66.7
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 4.2e-166 588.6 459 66.7
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 4.2e-166 588.6 461 63.8
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 1.6e-165 586.6 463 64.1
Carub.0008s1589 Capsella rubella HOM05D003532 ORTHO05D003298 6.1e-165 584.7 461 62.9
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.0e-164 583.9 463 63.7
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 1.0e-164 583.9 457 65.0
AT5G55540 Arabidopsis thaliana HOM05D003532 ORTHO05D003298 1.4e-164 583.6 461 62.7
AL8G31090 Arabidopsis lyrata HOM05D003532 ORTHO05D003298 1.8e-164 583.2 461 62.5
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.8e-164 583.2 463 63.5
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 2.3e-164 582.8 461 63.8
CARHR268860 Cardamine hirsuta HOM05D003532 ORTHO05D003298 4.4e-163 578.6 461 63.1
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 7.5e-163 577.8 452 65.7
AUR62015940 Chenopodium quinoa HOM05D003532 ORTHO05D003298 1.4e-161 573.5 459 61.7
BcaB08g35909 Brassica carinata HOM05D003532 ORTHO05D003298 2.4e-161 572.8 459 62.3
C09p46210 Brassica napus HOM05D003532 ORTHO05D003298 1.2e-160 570.5 459 62.5
BolC9t57486H Brassica oleracea HOM05D003532 ORTHO05D003298 1.6e-160 570.1 459 62.5
A10p12730 Brassica napus HOM05D003532 ORTHO05D003298 3.5e-160 568.9 459 62.1
BraA10t43365Z Brassica rapa HOM05D003532 ORTHO05D003298 3.5e-160 568.9 459 62.1
EL10Ac4g07624 Beta vulgaris HOM05D003532 ORTHO05D003298 1.3e-159 567.0 437 65.9
Thhalv10012444m.g Eutrema salsugineum HOM05D003532 ORTHO05D003298 3.8e-159 565.5 459 61.9
Sp6g17430 Schrenkiella parvula HOM05D003532 ORTHO05D003298 7.2e-158 561.2 461 61.6
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 4.7e-149 531.9 459 57.5
Actinidia00098 Actinidia chinensis HOM05D003532 ORTHO05D003298 6.8e-148 528.1 460 61.1
SGA_v2.0_scaffold171G38893 Striga asiatica HOM05D003532 ORTHO05D003298 2.0e-144 516.5 460 58.7
unitig_899.g15279 Utricularia gibba HOM05D003532 ORTHO05D003298 7.8e-144 514.6 466 56.7
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 1.4e-140 503.8 455 58.0
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 1.1e-134 484.2 324 77.5
HPP92_012225 Vanilla planifolia HOM05D003532 ORTHO05D003298 2.5e-134 483.0 423 56.0
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 7.5e-131 471.5 437 59.3
Zm00001eb057430 Zea mays HOM05D003532 ORTHO05D003298 1.9e-129 466.8 460 51.5
MBI19_g37319_MAGBIO Magnolia biondii HOM05D003532 ORTHO05D003298 9.0e-108 394.8 368 57.3
AUR62040668 Chenopodium quinoa HOM05D003532 ORTHO05D003298 1.9e-102 377.1 288 64.6
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 2.7e-88 330.1 464 43.8
Actinidia04774 Actinidia chinensis HOM05D003532 ORTHO05D003298 9.0e-76 288.5 461 39.0
MD11G1205800 Malus domestica HOM05D003532 ORTHO05D003298 2.7e-48 197.2 172 62.8
MD11G1205700 Malus domestica HOM05D003532 ORTHO05D003298 1.6e-43 181.4 149 65.1
AUR62040669 Chenopodium quinoa HOM05D003532 ORTHO05D003298 2.0e-43 181.0 158 54.4
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 7.7e-43 179.1 465 30.8
CDE04G0250 Ceratophyllum demersum HOM05D003532 ORTHO05D003298 2.7e-27 127.5 143 44.8
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.5e-25 121.7 452 26.5
Pp3c10_20720 Physcomitrium patens HOM05D003532 ORTHO05D003298 1.5e-25 121.7 456 25.7
Pp3c3_24130 Physcomitrium patens HOM05D003532 ORTHO05D003298 1.2e-24 118.6 454 25.1
AagrBONN_evm.TU.Sc2ySwM_362.1324 Anthoceros agrestis HOM05D002844 ORTHO05D003298 6.8e-23 112.8 373 27.9
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 8.9e-23 112.5 496 24.2
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.0e-22 111.3 499 24.2
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.4e-22 110.2 502 23.5
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 1.3e-21 108.6 458 25.1
AagrBONN_evm.TU.Sc2ySwM_362.556 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.9e-20 104.8 493 23.3
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 7.0e-20 102.8 459 23.7
CBR_g38594 Chara braunii HOM05D003532 ORTHO05D003298 7.0e-20 102.8 458 24.5
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.0e-19 99.8 393 24.7
AagrBONN_evm.TU.Sc2ySwM_368.274 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.0e-19 99.8 396 24.7
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 7.8e-19 99.4 469 23.2
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 1.0e-18 99.0 467 24.8
CBR_g12182 Chara braunii HOM05D003532 ORTHO05D003298 3.6e-16 90.5 449 23.2
CBR_g40030 Chara braunii HOM05D007859 ORTHO05D003298 8.0e-16 89.4 464 22.4
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 1.5e-14 85.1 515 23.1
CBR_g12864 Chara braunii HOM05D003532 ORTHO05D003298 4.4e-14 83.6 476 22.3
Mapoly0157s0002 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.1e-12 79.0 451 24.2
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 1.9e-12 78.2 447 21.9
CBR_g38576 Chara braunii HOM05D003532 ORTHO05D003298 2.4e-12 77.8 525 22.1
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.5e-11 73.9 389 24.4
AagrBONN_evm.TU.Sc2ySwM_117.3748 Anthoceros agrestis HOM05D002844 ORTHO05D010627 6.0e-11 73.2 114 36.8
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 7.8e-11 72.8 486 23.0
PGSC0003DMG401018159 Solanum tuberosum HOM05D003532 ORTHO05D003298 7.8e-11 72.8 57 57.9
AagrBONN_evm.TU.Sc2ySwM_228.83 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.3e-10 72.0 138 34.1
Lsat_1_v5_gn_3_17020 Lactuca sativa HOM05D003532 ORTHO05D003298 1.7e-10 71.6 48 62.5
AagrBONN_evm.TU.Sc2ySwM_117.4056 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.3e-10 71.2 121 32.2
AagrBONN_evm.TU.Sc2ySwM_362.449 Anthoceros agrestis HOM05D002844 ORTHO05D010627 5.0e-10 70.1 123 30.1
CBR_g85241 Chara braunii HOM05D003532 ORTHO05D003298 8.6e-10 69.3 256 21.9
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 1.1e-09 68.9 477 20.1
AagrBONN_evm.TU.Sc2ySwM_362.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.9e-09 68.2 123 29.3
AagrBONN_evm.TU.Sc2ySwM_362.460 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.3e-09 67.4 123 29.3
AagrBONN_evm.TU.Sc2ySwM_368.236 Anthoceros agrestis HOM05D003532 ORTHO05D015853 3.3e-09 67.4 148 28.4
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.6e-09 66.6 492 22.0
AagrBONN_evm.TU.Sc2ySwM_117.4062 Anthoceros agrestis HOM05D003532 ORTHO05D015853 9.5e-09 65.9 271 25.1
AagrBONN_evm.TU.Sc2ySwM_344.5219 Anthoceros agrestis HOM05D003532 ORTHO05D003298 9.5e-09 65.9 134 28.4
AagrBONN_evm.TU.Sc2ySwM_368.2565 Anthoceros agrestis HOM05D003532 ORTHO05D003298 9.5e-09 65.9 128 37.5
CBR_g12862 Chara braunii HOM05D003532 ORTHO05D003298 2.1e-08 64.7 260 23.5
AagrBONN_evm.TU.Sc2ySwM_340.760 Anthoceros agrestis HOM05D008597 ORTHO05D003298 2.8e-08 64.3 207 30.0
AagrBONN_evm.TU.Sc2ySwM_228.5542 Anthoceros agrestis HOM05D002844 ORTHO05D010627 3.6e-08 63.9 169 26.6
AagrBONN_evm.TU.Sc2ySwM_117.4103 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.7e-08 63.5 115 31.3
AagrBONN_evm.TU.Sc2ySwM_344.1379 Anthoceros agrestis HOM05D003532 ORTHO05D015853 4.7e-08 63.5 94 38.3
AagrBONN_evm.TU.Sc2ySwM_368.360__361 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.1e-07 62.4 164 29.9
AagrBONN_evm.TU.Sc2ySwM_340.456 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.4e-07 62.0 180 27.8
CBR_g12867 Chara braunii HOM05D000019 ORTHO05D003298 1.4e-07 62.0 253 22.9
Mapoly0068s0033 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.4e-07 62.0 137 30.7
AagrBONN_evm.TU.Sc2ySwM_362.995 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.8e-07 61.6 127 29.9
AagrBONN_evm.TU.Sc2ySwM_340.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.3e-07 61.2 176 25.6
AagrBONN_evm.TU.Sc2ySwM_344.5221 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.1e-07 60.8 129 29.5
CBR_g36281 Chara braunii HOM05D003532 ORTHO05D003298 2.6e-06 57.8 388 22.7
AagrBONN_evm.TU.Sc2ySwM_362.1677 Anthoceros agrestis HOM05D021531 ORTHO05D015853 3.4e-06 57.4 163 25.2
AagrBONN_evm.TU.Sc2ySwM_228.1318 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.8e-06 56.6 172 29.7


User provided reference genes

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