Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016585 Daucus carota HOM05D007878 ORTHO05D010022 1.3e-275 952.6 537 100.0
Actinidia04859 Actinidia chinensis HOM05D007878 ORTHO05D010022 4.7e-92 342.8 568 44.0
Cc04_g14870 Coffea canephora HOM05D007878 ORTHO05D010022 8.6e-78 295.4 574 39.5
Actinidia09234 Actinidia chinensis HOM05D007878 ORTHO05D010022 4.0e-75 286.6 569 39.7
Duzib084G0698 Durio zibethinus HOM05D007878 ORTHO05D010022 5.2e-75 286.2 591 38.4
Potri.015G061500 Populus trichocarpa HOM05D007878 ORTHO05D010022 2.7e-71 273.9 533 39.0
Dinv38757 Davidia involucrata HOM05D007878 ORTHO05D010022 2.5e-69 267.3 587 37.5
CAN.G479.49 Capsicum annuum HOM05D007878 ORTHO05D010022 3.3e-69 266.9 563 38.7
TAR374G1173 Trochodendron aralioides HOM05D007878 ORTHO05D010022 2.1e-68 264.2 600 34.7
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 3.6e-68 263.5 602 34.7
Prupe.5G199300 Prunus persica HOM05D007878 ORTHO05D010022 6.2e-68 262.7 613 35.4
Nn4g23313 Nelumbo nucifera HOM05D007878 ORTHO05D010022 2.4e-67 260.8 592 35.3
FAN13G2185 Fragaria x ananassa HOM05D007878 ORTHO05D010022 3.1e-67 260.4 603 35.0
CiPaw.11G048800 Carya illinoinensis HOM05D007878 ORTHO05D010022 6.9e-67 259.2 578 35.6
Nitab4.5_0002756g0040 Nicotiana tabacum HOM05D007878 ORTHO05D010022 6.9e-67 259.2 562 38.4
FAN18G1316 Fragaria x ananassa HOM05D007878 ORTHO05D010022 2.6e-66 257.3 603 35.0
Sopen03g034610 Solanum pennellii HOM05D007878 ORTHO05D010022 3.4e-66 256.9 565 38.2
Cfa019282 Carpinus fangiana HOM05D007878 ORTHO05D010022 2.9e-65 253.8 565 36.8
DCAR_021514 Daucus carota HOM05D007878 ORTHO05D010022 4.9e-65 253.1 323 52.9
Peaxi162Scf00274g00029 Petunia axillaris HOM05D007878 ORTHO05D010022 1.9e-64 251.1 545 37.8
PGSC0003DMG400024662 Solanum tuberosum HOM05D007878 ORTHO05D010022 2.3e-62 244.2 564 36.2
Atru.chr9.783 Acer truncatum HOM05D007878 ORTHO05D010022 4.3e-61 240.0 576 35.2
Solyc03g115620.2 Solanum lycopersicum HOM05D007878 ORTHO05D010022 5.6e-61 239.6 565 36.5
Oeu031812.2 Olea europaea HOM05D007878 ORTHO05D010022 2.1e-60 237.7 562 36.3
MD14G1206000 Malus domestica HOM05D007878 ORTHO05D010022 1.8e-59 234.6 583 33.6
Thecc.03G095300 Theobroma cacao HOM05D007878 ORTHO05D010022 5.3e-59 233.0 588 34.4
Nitab4.5_0001211g0090 Nicotiana tabacum HOM05D007878 ORTHO05D010022 1.3e-57 228.4 522 36.2
RcHm_v2.0_Chr7g0182231 Rosa chinensis HOM05D007878 ORTHO05D010022 8.4e-57 225.7 602 33.2
Aqoxy3G03537 Aquilegia oxysepala HOM05D007878 ORTHO05D010022 1.8e-54 218.0 608 33.2
Gohir.A03G068300 Gossypium hirsutum HOM05D007878 ORTHO05D010022 2.3e-54 217.6 561 33.7
CiPaw.11G048500 Carya illinoinensis HOM05D007878 ORTHO05D010022 3.0e-54 217.2 586 33.3
PGR083G0831 Punica granatum HOM05D007878 ORTHO05D010022 1.1e-53 215.3 589 33.3
FvH4_5g14430 Fragaria vesca HOM05D007878 ORTHO05D010022 3.3e-53 213.8 603 32.0
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 1.6e-52 211.5 719 29.8
MBI16_g14990_MAGBIO Magnolia biondii HOM05D007878 ORTHO05D010022 1.6e-52 211.5 582 33.3
Manes.14G082500 Manihot esculenta HOM05D007878 ORTHO05D010022 1.1e-51 208.8 583 32.4
Gohir.D03G094900 Gossypium hirsutum HOM05D007878 ORTHO05D010022 1.8e-51 208.0 561 33.3
Ciclev10024608m.g Citrus clementina HOM05D007878 ORTHO05D010022 1.5e-50 204.9 574 31.9
TWI60G1109 Tripterygium wilfordii HOM05D007878 ORTHO05D010022 2.6e-50 204.1 595 32.4
Nn3g17364 Nelumbo nucifera HOM05D007878 ORTHO05D010022 2.9e-49 200.7 426 35.9
Manes.06G088500 Manihot esculenta HOM05D007878 ORTHO05D010022 6.0e-47 193.0 581 32.7
GSVIVG01007952001 Vitis vinifera HOM05D007878 ORTHO05D010022 1.1e-45 188.7 477 33.8
COL.COLO4_38427 Corchorus olitorius HOM05D007878 ORTHO05D010022 1.9e-45 188.0 580 31.4
Gorai.003G099100 Gossypium raimondii HOM05D007878 ORTHO05D010022 5.7e-45 186.4 506 32.8
PSO063G3897 Papaver somniferum HOM05D007878 ORTHO05D010022 2.8e-44 184.1 570 31.2
Oeu052466.1 Olea europaea HOM05D007878 ORTHO05D010022 1.1e-43 182.2 546 31.7
Oeu052465.1 Olea europaea HOM05D007878 ORTHO05D010022 1.8e-43 181.4 546 31.7
Sed0013205 Sechium edule HOM05D007878 ORTHO05D010022 7.6e-42 176.0 559 32.0
CANSAT80G1712 Cannabis sativa HOM05D007878 ORTHO05D010022 1.1e-40 172.2 573 29.5
Phvul.003G187300 Phaseolus vulgaris HOM05D007878 ORTHO05D010022 1.4e-40 171.8 563 31.4
Oeu047269.3 Olea europaea HOM05D007878 ORTHO05D010022 1.6e-39 168.3 520 31.3
MD06G1198500 Malus domestica HOM05D007878 ORTHO05D010022 4.6e-39 166.8 568 29.8
Ca_21797_v3 Cicer arietinum L. HOM05D007878 ORTHO05D010022 2.3e-38 164.5 503 32.0
ClCG06G015920 Citrullus lanatus HOM05D007878 ORTHO05D010022 3.0e-38 164.1 571 29.6
MELO3C017199.2 Cucumis melo HOM05D007878 ORTHO05D010022 3.9e-38 163.7 580 29.8
Lj4g0012809 Lotus japonicus HOM05D007878 ORTHO05D010022 3.3e-37 160.6 555 29.7
QL10p018347 Quercus lobata HOM05D007878 ORTHO05D010022 3.3e-37 160.6 523 31.2
CsaV3_1G002630 Cucumis sativus L. HOM05D007878 ORTHO05D010022 1.3e-36 158.7 578 28.9
Glyma.17G103300 Glycine max HOM05D007878 ORTHO05D010022 1.3e-36 158.7 562 32.0
Oeu046990.1 Olea europaea HOM05D007878 ORTHO05D010022 1.3e-36 158.7 512 31.6
Medtr4g109150 Medicago truncatula HOM05D007878 ORTHO05D010022 4.8e-36 156.8 558 30.6
ECA246G4297 Erigeron canadensis HOM05D007878 ORTHO05D010022 1.5e-34 151.8 515 30.5
Eucgr.B00555 Eucalyptus grandis HOM05D007878 ORTHO05D010022 2.6e-34 151.0 485 31.8
Haze_07666 Corylus avellana HOM05D007878 ORTHO05D010022 2.2e-33 147.9 493 30.8
Cpa.g.sc13.307 Carica papaya HOM05D007878 ORTHO05D010022 5.0e-33 146.7 520 28.7
HanXRQChr05g0157141 Helianthus annuus HOM05D007878 ORTHO05D010022 2.1e-31 141.4 367 35.1
Migut.I00229 Erythranthe guttata HOM05D007878 ORTHO05D010022 4.6e-31 140.2 559 28.4
arahy.Tifrunner.gnm1.ann1.3W98EY Arachis hypogaea HOM05D007878 ORTHO05D010022 6.7e-30 136.3 564 28.9
arahy.Tifrunner.gnm1.ann1.QT4JJ4 Arachis hypogaea HOM05D007878 ORTHO05D010022 3.2e-24 117.5 500 29.2
ATR0730G174 Amborella trichopoda HOM05D007878 ORTHO05D010022 8.2e-20 102.8 608 24.8
CSS0029238 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 2.4e-19 101.3 455 27.5
TPR.G1999 Trifolium pratense HOM05D007878 ORTHO05D010022 9.1e-19 99.4 559 27.5
Lsat_1_v5_gn_5_21161 Lactuca sativa HOM05D007878 ORTHO05D010022 1.2e-18 99.0 400 29.0
Atru.chr9.308 Acer truncatum HOM05D007878 ORTHO05D010022 1.6e-18 98.6 186 38.7
SEGI_06346 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 1.2e-15 89.0 435 23.2
QL05p067335 Quercus lobata HOM05D001827 ORTHO05D001790 2.7e-15 87.8 548 22.6
SEGI_16968 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 8.0e-15 86.3 622 23.2
MSTRG.22991 Avicennia marina HOM05D007878 ORTHO05D010022 1.2e-13 82.4 141 44.0
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 4.4e-13 80.5 612 24.3
Psat4g049000 Pisum sativum HOM05D007878 ORTHO05D010022 8.2e-12 76.3 558 24.2
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 1.1e-11 75.9 590 22.5
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 1.6e-10 72.0 574 21.1
Haze_07028 Corylus avellana HOM05D001827 ORTHO05D001790 2.7e-10 71.2 540 22.0
Lalb_Chr07g0176921 Lupinus albus HOM05D001827 ORTHO05D001790 1.0e-09 69.3 570 23.9
QL05p066984 Quercus lobata HOM05D001827 ORTHO05D001790 1.3e-09 68.9 549 22.0
SEGI_39497 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 2.9e-09 67.8 582 21.8
MBI14_g13533_MAGBIO Magnolia biondii HOM05D001827 ORTHO05D001790 6.5e-09 66.6 422 23.0
Medtr3g007920 Medicago truncatula HOM05D001827 ORTHO05D001790 8.5e-09 66.2 579 22.5
Zm00001eb133280 Zea mays HOM05D001827 ORTHO05D001790 1.9e-08 65.1 302 23.5
Sc05g0009880 Simmondsia chinensis HOM05D001827 ORTHO05D001790 2.5e-08 64.7 558 23.5
Manes.09G083200 Manihot esculenta HOM05D001827 ORTHO05D001790 7.2e-08 63.2 557 22.8
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 2.1e-07 61.6 594 23.4
Manes.08G068500 Manihot esculenta HOM05D001827 ORTHO05D001790 1.0e-06 59.3 343 27.7
Lalb_Chr13g0304391 Lupinus albus HOM05D001827 ORTHO05D001790 1.4e-06 58.9 573 22.9
Rhsim02G0090400 Rhododendron simsii HOM05D001827 ORTHO05D001790 1.4e-06 58.9 580 23.1
CDE01G0404 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 2.3e-06 58.2 278 24.1
MSTRG.7123 Avicennia marina HOM05D001827 ORTHO05D001790 3.0e-06 57.8 584 21.9
Lalb_Chr15g0088281 Lupinus albus HOM05D001827 ORTHO05D001790 3.0e-06 57.8 590 21.7
PSO210G6911 Papaver somniferum HOM05D001827 ORTHO05D001790 4.0e-06 57.4 417 22.8
Hund01866 Selenicereus undatus HOM05D001827 ORTHO05D001790 4.0e-06 57.4 296 26.0
Eucgr.E03845 Eucalyptus grandis HOM05D001827 ORTHO05D001790 6.8e-06 56.6 557 22.6
Lj6g0015113 Lotus japonicus HOM05D001827 ORTHO05D001790 6.8e-06 56.6 418 22.5
SEGI_23448 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 6.8e-06 56.6 293 24.2
Aa31LG3G11780 Aethionema arabicum HOM05D001827 ORTHO05D001790 8.8e-06 56.2 605 20.7
Gorai.002G101700 Gossypium raimondii HOM05D001827 ORTHO05D001790 8.8e-06 56.2 339 25.1
TAR626G1140 Trochodendron aralioides HOM05D001827 ORTHO05D001790 8.8e-06 56.2 296 26.4


User provided reference genes

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