Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016561 Daucus carota HOM05D000410 ORTHO05D177335 3.3e-178 628.2 319 100.0
Nitab4.5_0008513g0010 Nicotiana tabacum HOM05D000410 ORTHO05D001514 1.1e-16 91.7 282 29.8
Peaxi162Scf01125g00111 Petunia axillaris HOM05D000410 ORTHO05D001514 4.3e-16 89.7 292 29.8
Sopen02g018310 Solanum pennellii HOM05D000410 ORTHO05D001514 2.8e-15 87.0 312 29.2
PGSC0003DMG400010342 Solanum tuberosum HOM05D000410 ORTHO05D001514 3.6e-15 86.7 309 28.2
Sabra12G0089600 Salix brachista HOM05D000410 ORTHO05D001514 8.1e-15 85.5 310 27.1
Peaxi162Scf01125g00023 Petunia axillaris HOM05D000410 ORTHO05D001514 1.4e-14 84.7 254 31.1
Nitab4.5_0008038g0010 Nicotiana tabacum HOM05D000410 ORTHO05D001514 1.8e-14 84.3 316 26.9
Cc09_g06820 Coffea canephora HOM05D000410 ORTHO05D001514 3.1e-14 83.6 297 29.3
MD05G1255400 Malus domestica HOM05D000410 ORTHO05D001514 1.5e-13 81.3 287 28.6
CSS0038821 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D001514 3.4e-13 80.1 297 26.9
Nitab4.5_0006263g0010 Nicotiana tabacum HOM05D000410 ORTHO05D001514 3.4e-13 80.1 286 26.9
vmacro03503 Vaccinium macrocarpon HOM05D000410 ORTHO05D001514 4.4e-13 79.7 187 32.1
Dinv01369 Davidia involucrata HOM05D000410 ORTHO05D001514 5.8e-13 79.3 302 28.5
Cpa.g.sc135.36 Carica papaya HOM05D000410 ORTHO05D001514 1.3e-12 78.2 245 29.4
Lj2A353T13 Lonicera japonica HOM05D000410 ORTHO05D001514 1.7e-12 77.8 184 32.1
Nitab4.5_0000767g0050 Nicotiana tabacum HOM05D000410 ORTHO05D001514 2.9e-12 77.0 317 26.5
DCAR_007796 Daucus carota HOM05D000410 ORTHO05D001514 4.9e-12 76.3 265 28.3
Oeu052676.2 Olea europaea HOM05D000410 ORTHO05D001514 4.9e-12 76.3 249 29.7
Peaxi162Scf00149g01111 Petunia axillaris HOM05D000410 ORTHO05D001514 4.9e-12 76.3 182 33.0
BcaNung02547 Brassica carinata HOM05D000410 ORTHO05D001514 6.4e-12 75.9 180 31.1
C07p50560 Brassica napus HOM05D000410 ORTHO05D001514 6.4e-12 75.9 180 31.1
BolC7t45558H Brassica oleracea HOM05D000410 ORTHO05D001514 8.4e-12 75.5 180 31.1
BcaC06g30624 Brassica carinata HOM05D000410 ORTHO05D001514 1.1e-11 75.1 181 32.0
Gorai.010G169200 Gossypium raimondii HOM05D000410 ORTHO05D001514 1.9e-11 74.3 316 26.3
BcaNung01752 Brassica carinata HOM05D000410 ORTHO05D001514 2.4e-11 73.9 181 30.9
Lalb_Chr20g0119881 Lupinus albus HOM05D000410 ORTHO05D001514 2.4e-11 73.9 217 28.6
Gohir.A06G142300 Gossypium hirsutum HOM05D000410 ORTHO05D001514 3.2e-11 73.6 245 27.8
Sp7g18300 Schrenkiella parvula HOM05D000410 ORTHO05D001514 3.2e-11 73.6 180 31.1
MSTRG.7584 Avicennia marina HOM05D000410 ORTHO05D001514 4.1e-11 73.2 252 27.8
A03p52000 Brassica napus HOM05D000410 ORTHO05D001514 4.1e-11 73.2 180 31.1
BraA03t14287Z Brassica rapa HOM05D000410 ORTHO05D001514 4.1e-11 73.2 180 31.1
A01p11680 Brassica napus HOM05D000410 ORTHO05D001514 5.4e-11 72.8 181 30.9
DCAR_003794 Daucus carota HOM05D000410 ORTHO05D001514 5.4e-11 72.8 181 28.7
Gohir.D06G145400 Gossypium hirsutum HOM05D000410 ORTHO05D001514 5.4e-11 72.8 245 27.3
Lalb_Chr15g0088571 Lupinus albus HOM05D000410 ORTHO05D001514 7.1e-11 72.4 178 29.8
BcaB03g11641 Brassica carinata HOM05D000410 ORTHO05D001514 9.2e-11 72.0 180 29.4
BraA01t01110Z Brassica rapa HOM05D000410 ORTHO05D001514 9.2e-11 72.0 181 30.4
Carub.0007s2145 Capsella rubella HOM05D000410 ORTHO05D001514 9.2e-11 72.0 180 31.1
Lalb_Chr18g0057741 Lupinus albus HOM05D000410 ORTHO05D001514 9.2e-11 72.0 196 29.6
Sed0004643 Sechium edule HOM05D000410 ORTHO05D001514 1.2e-10 71.6 182 28.6
Actinidia22384 Actinidia chinensis HOM05D000410 ORTHO05D001514 1.6e-10 71.2 188 29.8
Duzib235G0010 Durio zibethinus HOM05D000410 ORTHO05D001514 1.6e-10 71.2 228 26.8
MD10G1235500 Malus domestica HOM05D000410 ORTHO05D001514 1.6e-10 71.2 284 27.5
THA.LOC104811495 Tarenaya hassleriana HOM05D000410 ORTHO05D001514 2.1e-10 70.9 180 31.7
Thecc.06G139100 Theobroma cacao HOM05D000410 ORTHO05D001514 2.1e-10 70.9 242 26.0
AT4G19700 Arabidopsis thaliana HOM05D000410 ORTHO05D001514 2.7e-10 70.5 180 30.0
BcaC01g00632 Brassica carinata HOM05D000410 ORTHO05D001514 2.7e-10 70.5 181 29.3
DCAR_001328 Daucus carota HOM05D000410 ORTHO05D175223 2.7e-10 70.5 117 41.9
Hma1.2p1_0040F.1_g025000 Hydrangea macrophylla HOM05D000410 ORTHO05D001514 3.5e-10 70.1 184 27.2
THA.LOC104806211 Tarenaya hassleriana HOM05D000410 ORTHO05D001514 3.5e-10 70.1 323 24.5
AL7G34340 Arabidopsis lyrata HOM05D000410 ORTHO05D001514 4.6e-10 69.7 229 28.4
Dinv11867 Davidia involucrata HOM05D000410 ORTHO05D001514 4.6e-10 69.7 326 25.2
Glyma.09G019900 Glycine max HOM05D000410 ORTHO05D001514 4.6e-10 69.7 181 30.9
Prupe.4G108500 Prunus persica HOM05D000410 ORTHO05D001514 6.0e-10 69.3 224 28.6
Solyc02g069180.4 Solanum lycopersicum HOM05D000410 ORTHO05D001514 6.0e-10 69.3 256 30.1
TWI38G1978 Tripterygium wilfordii HOM05D000410 ORTHO05D001514 6.0e-10 69.3 285 26.0
Atru.chr10.607 Acer truncatum HOM05D000410 ORTHO05D001514 7.8e-10 68.9 285 26.7
CARHR226520 Cardamine hirsuta HOM05D000410 ORTHO05D001514 7.8e-10 68.9 196 27.0
Thhalv10018797m.g Eutrema salsugineum HOM05D000410 ORTHO05D001514 7.8e-10 68.9 289 25.6
Glyma.15G126400 Glycine max HOM05D000410 ORTHO05D001514 7.8e-10 68.9 225 28.0
SGA_v2.0_scaffold298G47669 Striga asiatica HOM05D000410 ORTHO05D001514 1.0e-09 68.6 242 26.0
Medtr2g028830 Medicago truncatula HOM05D000410 ORTHO05D001514 1.3e-09 68.2 180 32.2
Sabra15G0136100 Salix brachista HOM05D000410 ORTHO05D001514 1.3e-09 68.2 235 28.9
Sp2g09880 Schrenkiella parvula HOM05D000410 ORTHO05D001514 1.3e-09 68.2 209 27.3
AL3G24600 Arabidopsis lyrata HOM05D000410 ORTHO05D001514 1.7e-09 67.8 183 30.6
BolC1t01349H Brassica oleracea HOM05D000410 ORTHO05D001514 1.7e-09 67.8 181 30.4
Carub.0003s1228 Capsella rubella HOM05D000410 ORTHO05D001514 3.9e-09 66.6 183 30.1
Lj6g0001087 Lotus japonicus HOM05D000410 ORTHO05D001514 3.9e-09 66.6 180 31.7
A03p37880 Brassica napus HOM05D000410 ORTHO05D001514 5.1e-09 66.2 182 27.5
C01p13800 Brassica napus HOM05D000410 ORTHO05D001514 5.1e-09 66.2 181 29.8
C01p52230 Brassica napus HOM05D000410 ORTHO05D001514 5.1e-09 66.2 307 26.1
BraA03t12943Z Brassica rapa HOM05D000410 ORTHO05D001514 5.1e-09 66.2 182 27.5
CARHR087440 Cardamine hirsuta HOM05D000410 ORTHO05D001514 5.1e-09 66.2 313 25.6
MSTRG.16336 Avicennia marina HOM05D000410 ORTHO05D001514 6.6e-09 65.9 231 26.0
C03p82440 Brassica napus HOM05D000410 ORTHO05D001514 6.6e-09 65.9 181 28.7
Ciclev10015958m.g Citrus clementina HOM05D000410 ORTHO05D001514 6.6e-09 65.9 281 25.3
AT3G12920 Arabidopsis thaliana HOM05D000410 ORTHO05D001514 8.6e-09 65.5 317 25.9
BolC3t20510H Brassica oleracea HOM05D000410 ORTHO05D001514 8.6e-09 65.5 181 28.7
Thhalv10025664m.g Eutrema salsugineum HOM05D000410 ORTHO05D001514 8.6e-09 65.5 180 28.9
HPP92_013923 Vanilla planifolia HOM05D000410 ORTHO05D001514 8.6e-09 65.5 181 28.7
VMungo0540G2388 Vigna mungo HOM05D000410 ORTHO05D001514 8.6e-09 65.5 181 29.3
Oeu050065.1 Olea europaea HOM05D000410 ORTHO05D001514 1.1e-08 65.1 227 26.9
Oeu056021.1 Olea europaea HOM05D000410 ORTHO05D001514 1.1e-08 65.1 234 27.8
BolC1t05162H Brassica oleracea HOM05D000410 ORTHO05D001514 1.5e-08 64.7 286 25.9
Ca_13585_v3 Cicer arietinum L. HOM05D000410 ORTHO05D001514 1.5e-08 64.7 198 27.8
Migut.M01553 Erythranthe guttata HOM05D000410 ORTHO05D001514 1.5e-08 64.7 183 27.9
Phvul.002G099600 Phaseolus vulgaris HOM05D000410 ORTHO05D001514 1.5e-08 64.7 241 26.1
Phvul.006G132000 Phaseolus vulgaris HOM05D000410 ORTHO05D001514 1.5e-08 64.7 180 28.9
Duzib192G0204 Durio zibethinus HOM05D000410 ORTHO05D001514 1.9e-08 64.3 232 26.7
arahy.Tifrunner.gnm1.ann1.577E3L Arachis hypogaea HOM05D000410 ORTHO05D001514 2.5e-08 63.9 264 26.9
TAR626G1263 Trochodendron aralioides HOM05D000410 ORTHO05D001514 2.5e-08 63.9 291 27.1
Potri.015G118000 Populus trichocarpa HOM05D000410 ORTHO05D001514 3.3e-08 63.5 233 26.6
AL8G14140 Arabidopsis lyrata HOM05D000410 ORTHO05D001514 4.3e-08 63.2 180 30.0
A01p40610 Brassica napus HOM05D000410 ORTHO05D001514 4.3e-08 63.2 298 26.2
A05p36580 Brassica napus HOM05D000410 ORTHO05D001514 4.3e-08 63.2 180 28.9
BraA01t04094Z Brassica rapa HOM05D000410 ORTHO05D001514 4.3e-08 63.2 298 26.2
BraA05t22457Z Brassica rapa HOM05D000410 ORTHO05D001514 4.3e-08 63.2 180 28.9
TAR624G1445 Trochodendron aralioides HOM05D000410 ORTHO05D001514 4.3e-08 63.2 182 27.5
BcaC05g29225 Brassica carinata HOM05D000410 ORTHO05D001514 5.6e-08 62.8 180 28.9
C05p55000 Brassica napus HOM05D000410 ORTHO05D001514 5.6e-08 62.8 180 28.9
BolC5t34169H Brassica oleracea HOM05D000410 ORTHO05D001514 5.6e-08 62.8 180 28.9
TWI38G0707 Tripterygium wilfordii HOM05D000410 ORTHO05D001514 5.6e-08 62.8 190 25.8
VMungo0251G3601 Vigna mungo HOM05D000410 ORTHO05D001514 5.6e-08 62.8 227 30.8
BcaC09g48279 Brassica carinata HOM05D000410 ORTHO05D001514 7.3e-08 62.4 286 25.5
Ciclev10021015m.g Citrus clementina HOM05D000410 ORTHO05D001514 7.3e-08 62.4 195 26.7
Thhalv10021066m.g Eutrema salsugineum HOM05D000410 ORTHO05D001514 7.3e-08 62.4 184 28.8
Lsat_1_v5_gn_7_71280 Lactuca sativa HOM05D000410 ORTHO05D001514 7.3e-08 62.4 188 28.2
BcaB06g25500 Brassica carinata HOM05D000410 ORTHO05D001514 9.6e-08 62.0 180 28.9
Lj4g0025837 Lotus japonicus HOM05D000410 ORTHO05D001514 1.2e-07 61.6 173 28.9
Lalb_Chr05g0219771 Lupinus albus HOM05D000410 ORTHO05D001514 1.2e-07 61.6 180 26.7
CARHR072770 Cardamine hirsuta HOM05D000410 ORTHO05D001514 1.6e-07 61.2 180 29.4
COL.COLO4_30961 Corchorus olitorius HOM05D000410 ORTHO05D001514 1.6e-07 61.2 153 31.4
Manes.06G172200 Manihot esculenta HOM05D000410 ORTHO05D001514 1.6e-07 61.2 244 24.6
Oeu060346.3 Olea europaea HOM05D000410 ORTHO05D001514 1.6e-07 61.2 259 26.3
THA.LOC104808120 Tarenaya hassleriana HOM05D000410 ORTHO05D001514 1.6e-07 61.2 221 24.9
Migut.M01967 Erythranthe guttata HOM05D000410 ORTHO05D001514 2.1e-07 60.8 246 26.0
Eucgr.E01896 Eucalyptus grandis HOM05D000410 ORTHO05D001514 2.8e-07 60.5 180 27.8
SalBow7G4331 Salvia bowleyana HOM05D000410 ORTHO05D001514 2.8e-07 60.5 242 24.8
Sp3g11060 Schrenkiella parvula HOM05D000410 ORTHO05D001514 2.8e-07 60.5 183 27.3
Sopen02g009960 Solanum pennellii HOM05D000410 ORTHO05D001514 2.8e-07 60.5 263 25.9
BcaC01g04044 Brassica carinata HOM05D000410 ORTHO05D001514 3.6e-07 60.1 182 27.5
C03p45950 Brassica napus HOM05D000410 ORTHO05D001514 3.6e-07 60.1 182 27.5
BolC3t16871H Brassica oleracea HOM05D000410 ORTHO05D001514 3.6e-07 60.1 182 27.5
Medtr4g083540 Medicago truncatula HOM05D000410 ORTHO05D001514 3.6e-07 60.1 226 24.3
SGA_v2.0_scaffold175G39368 Striga asiatica HOM05D000410 ORTHO05D001514 3.6e-07 60.1 181 27.1
BcaB04g21019 Brassica carinata HOM05D000410 ORTHO05D001514 4.7e-07 59.7 183 27.3
THA.LOC104813615 Tarenaya hassleriana HOM05D000410 ORTHO05D001514 4.7e-07 59.7 181 27.1
BcaB07g30911 Brassica carinata HOM05D000410 ORTHO05D001514 6.2e-07 59.3 180 27.2
AL2G39580 Arabidopsis lyrata HOM05D000410 ORTHO05D001514 8.1e-07 58.9 180 26.7
FAN16G0811 Fragaria x ananassa HOM05D000410 ORTHO05D001514 8.1e-07 58.9 264 23.5
Gohir.A10G045400 Gossypium hirsutum HOM05D000410 ORTHO05D001514 8.1e-07 58.9 143 30.8
BcaB04g20152 Brassica carinata HOM05D000410 ORTHO05D001514 1.1e-06 58.5 181 26.0
Duzib160G0200 Durio zibethinus HOM05D000410 ORTHO05D001514 1.1e-06 58.5 232 25.0
Gohir.D10G046600 Gossypium hirsutum HOM05D000410 ORTHO05D001514 1.1e-06 58.5 143 30.8
Gorai.011G049400 Gossypium raimondii HOM05D000410 ORTHO05D001514 1.1e-06 58.5 143 30.8
Lalb_Chr25g0284931 Lupinus albus HOM05D000410 ORTHO05D001514 1.1e-06 58.5 190 24.7
unitig_748.g7361 Utricularia gibba HOM05D000410 ORTHO05D001514 1.1e-06 58.5 183 29.0
Ca_03671_v3 Cicer arietinum L. HOM05D000410 ORTHO05D001514 1.4e-06 58.2 258 24.8
Glyma.20G022400 Glycine max HOM05D000410 ORTHO05D001514 1.4e-06 58.2 181 26.5
arahy.Tifrunner.gnm1.ann1.V69JKS Arachis hypogaea HOM05D000410 ORTHO05D001514 1.8e-06 57.8 262 23.7
CiPaw.10G065500 Carya illinoinensis HOM05D000410 ORTHO05D001514 1.8e-06 57.8 169 30.2
Lj1A1143T39 Lonicera japonica HOM05D000410 ORTHO05D001514 1.8e-06 57.8 225 27.1
HPP92_018656 Vanilla planifolia HOM05D000410 ORTHO05D001514 1.8e-06 57.8 183 26.8
Haze_06015 Corylus avellana HOM05D000410 ORTHO05D001514 3.1e-06 57.0 312 26.0
Glyma.07G223100 Glycine max HOM05D000410 ORTHO05D001514 5.2e-06 56.2 187 25.7
Manes.14G016800 Manihot esculenta HOM05D000410 ORTHO05D001514 5.2e-06 56.2 276 22.1
PGSC0003DMG400024368 Solanum tuberosum HOM05D000410 ORTHO05D001514 5.2e-06 56.2 261 24.9
GSVIVG01026248001 Vitis vinifera HOM05D000410 ORTHO05D001514 6.8e-06 55.8 132 30.3
TPR.G7085 Trifolium pratense HOM05D000410 ORTHO05D001514 8.9e-06 55.5 154 30.5


User provided reference genes

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