Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 2.3e-66 255.4 127 100.0
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 4.2e-47 191.4 114 78.1
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 5.4e-47 191.0 115 77.4
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 6.0e-46 187.6 123 74.8
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.3e-45 186.4 115 77.4
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.7e-45 186.0 114 76.3
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.7e-45 186.0 115 75.7
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 3.9e-45 184.9 111 78.4
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 3.9e-45 184.9 111 78.4
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 5.1e-45 184.5 114 76.3
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 5.1e-45 184.5 114 76.3
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 5.1e-45 184.5 122 72.1
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 8.7e-45 183.7 115 73.9
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.1e-44 183.3 111 77.5
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.5e-44 182.2 114 76.3
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 7.3e-44 180.6 120 73.3
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 9.6e-44 180.3 125 72.0
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 9.6e-44 180.3 114 74.6
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.3e-43 179.9 109 77.1
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.1e-43 179.1 109 77.1
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.8e-43 178.7 117 73.5
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.8e-43 178.7 124 70.2
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 3.6e-43 178.3 105 79.0
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 6.2e-43 177.6 103 81.6
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 8.1e-43 177.2 108 75.0
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.1e-43 177.2 117 71.8
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.1e-42 176.8 109 77.1
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.1e-42 176.8 117 74.4
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.1e-42 176.8 124 69.4
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.4e-42 176.4 111 73.9
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.4e-42 176.4 122 69.7
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.8e-42 176.0 111 72.1
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 3.1e-42 175.3 107 77.6
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.1e-42 175.3 120 70.0
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.1e-42 175.3 120 70.0
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 3.1e-42 175.3 108 75.0
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 5.3e-42 174.5 105 77.1
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 5.3e-42 174.5 113 73.5
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 6.9e-42 174.1 111 74.8
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 9.0e-42 173.7 104 76.9
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.2e-41 173.3 117 71.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.2e-41 173.3 117 71.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.5e-41 172.9 104 76.9
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 2.6e-41 172.2 117 70.9
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.6e-41 172.2 113 73.5
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 3.4e-41 171.8 108 75.0
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.4e-41 171.8 126 64.3
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 3.4e-41 171.8 111 72.1
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 4.5e-41 171.4 114 71.9
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 4.5e-41 171.4 136 64.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 4.5e-41 171.4 126 64.3
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 4.5e-41 171.4 111 71.2
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 4.5e-41 171.4 103 75.7
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 5.8e-41 171.0 108 74.1
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 7.6e-41 170.6 114 71.9
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 7.6e-41 170.6 120 66.7
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 9.9e-41 170.2 111 73.9
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 9.9e-41 170.2 124 66.9
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 1.3e-40 169.9 114 71.9
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 1.3e-40 169.9 119 65.5
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.2e-40 169.1 112 76.8
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 4.9e-40 167.9 114 69.3
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 6.4e-40 167.5 125 64.8
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 8.4e-40 167.2 109 73.4
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 8.4e-40 167.2 104 75.0
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 8.4e-40 167.2 119 68.1
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.1e-39 166.8 108 72.2
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 1.1e-39 166.8 108 72.2
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.9e-39 166.0 106 74.5
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.9e-39 166.0 148 57.4
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.4e-39 165.6 117 67.5
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.4e-39 165.6 112 72.3
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.2e-39 165.2 114 69.3
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 4.2e-39 164.9 114 69.3
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 4.2e-39 164.9 103 76.7
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 4.2e-39 164.9 121 66.1
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 5.4e-39 164.5 111 70.3
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 7.1e-39 164.1 114 70.2
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 2.1e-38 162.5 101 76.2
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 2.1e-38 162.5 101 76.2
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 2.1e-38 162.5 101 76.2
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 2.1e-38 162.5 101 76.2
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 2.7e-38 162.2 122 65.6
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 4.6e-38 161.4 109 67.9
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 4.6e-38 161.4 109 67.9
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 7.9e-38 160.6 133 60.9
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.0e-37 160.2 96 79.2
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 2.3e-37 159.1 109 68.8
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.9e-37 158.3 99 73.7
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.9e-36 156.0 101 72.3
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.9e-36 156.0 108 66.7
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.5e-36 155.6 104 71.2
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 4.3e-36 154.8 102 70.6
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 2.1e-35 152.5 185 46.5
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.8e-35 152.1 99 69.7
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 3.7e-35 151.8 111 63.1
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.4e-34 149.1 154 52.6
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 2.4e-34 149.1 154 53.2
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.8e-33 144.4 151 52.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 7.6e-33 144.1 157 49.7
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.9e-32 142.1 105 65.7
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 7.1e-31 137.5 84 75.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 7.9e-30 134.0 117 59.0
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.0e-29 133.7 84 75.0
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.3e-29 133.3 97 67.0
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.3e-29 132.5 85 72.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 5.6e-28 127.9 87 72.4
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 7.4e-28 127.5 103 61.2
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 4.8e-27 124.8 75 74.7
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.0e-24 117.1 103 51.5
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.7e-24 116.3 65 84.6
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 6.5e-24 114.4 71 74.6
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.5e-23 112.5 108 54.6
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.6e-22 108.2 68 73.5
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.1e-20 103.6 92 56.5
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.5e-20 103.2 67 73.1
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.2e-17 93.6 104 44.2
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.2e-17 93.6 53 79.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.0e-16 90.5 66 68.2
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.1e-15 87.0 95 49.5
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 3.2e-15 85.5 57 73.7
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 1.2e-14 83.6 103 38.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.6e-14 83.2 98 38.8
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.5e-12 76.6 90 36.7
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.3e-11 73.6 40 77.5
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.6e-06 56.6 66 48.5


User provided reference genes

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