Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 4.9e-202 707.6 360 100.0
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.0e-150 536.2 362 75.1
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 1.5e-147 526.6 353 74.5
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 3.4e-147 525.4 361 75.1
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 7.7e-147 524.2 365 73.2
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 7.7e-147 524.2 365 73.2
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.2e-146 522.7 301 83.4
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.8e-146 521.9 365 72.6
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 6.5e-146 521.2 360 73.1
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.2e-145 518.5 365 72.9
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.4e-143 513.5 360 73.6
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 8.8e-143 510.8 356 71.9
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 3.3e-142 508.8 363 71.9
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.7e-141 506.5 363 71.6
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 3.7e-141 505.4 361 71.2
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 6.3e-141 504.6 355 71.8
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.0e-139 499.6 368 70.9
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 7.7e-139 497.7 329 72.9
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 1.7e-138 496.5 365 72.1
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 3.8e-138 495.4 337 73.6
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.1e-137 493.8 322 75.5
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.1e-137 493.8 352 71.0
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.9e-137 493.0 356 70.8
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 4.2e-137 491.9 359 69.6
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 5.5e-137 491.5 343 71.7
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 7.2e-137 491.1 336 72.9
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 9.4e-137 490.7 339 72.0
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 1.2e-136 490.3 363 69.1
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.2e-136 490.3 362 69.3
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.2e-136 490.3 357 71.1
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.6e-136 490.0 298 80.2
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 2.1e-136 489.6 363 70.0
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 2.7e-136 489.2 362 68.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 2.7e-136 489.2 362 69.9
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 3.6e-136 488.8 327 73.1
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 4.7e-136 488.4 362 68.8
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 8.0e-136 487.6 327 73.4
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 1.4e-135 486.9 356 70.2
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 1.8e-135 486.5 368 68.8
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 2.3e-135 486.1 343 70.8
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 2.3e-135 486.1 360 68.6
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 3.9e-135 485.3 366 68.9
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 5.2e-135 485.0 363 69.4
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 5.2e-135 485.0 343 71.1
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.1e-134 483.8 358 69.6
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.1e-134 483.8 302 78.5
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.1e-134 483.8 329 72.0
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.5e-134 483.4 364 68.7
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.6e-134 482.6 302 78.1
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 2.6e-134 482.6 362 68.5
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 2.6e-134 482.6 329 71.7
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 3.3e-134 482.3 361 69.5
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 4.4e-134 481.9 364 69.5
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 5.7e-134 481.5 338 71.3
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.4e-134 481.1 302 77.5
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 9.7e-134 480.7 360 70.6
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 1.8e-132 476.5 363 68.6
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.4e-132 476.1 328 72.0
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 3.1e-132 475.7 363 68.6
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 4.1e-132 475.3 363 68.6
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 4.1e-132 475.3 363 68.6
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.2e-131 473.8 368 69.0
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 4.5e-131 471.9 358 67.6
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.7e-130 469.9 382 63.9
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 3.8e-130 468.8 365 68.2
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 5.0e-130 468.4 360 68.9
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 8.5e-130 467.6 368 66.3
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 8.5e-130 467.6 361 66.5
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 1.1e-129 467.2 350 69.7
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.1e-129 467.2 328 71.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.9e-129 466.5 364 66.5
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 3.2e-129 465.7 349 68.8
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 2.1e-128 463.0 357 65.8
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 1.0e-127 460.7 285 80.4
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.4e-127 460.3 336 70.8
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 3.0e-127 459.1 365 64.4
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 4.0e-127 458.8 365 66.6
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 6.8e-127 458.0 363 66.1
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 7.0e-124 448.0 357 63.6
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.2e-123 447.2 269 78.8
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.6e-123 446.8 374 62.3
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 5.9e-123 444.9 359 61.6
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 5.5e-121 438.3 391 59.3
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 1.2e-120 437.2 266 78.6
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 2.1e-120 436.4 359 61.0
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.8e-119 433.3 266 78.6
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 2.3e-119 433.0 361 62.9
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 4.9e-117 425.2 365 61.4
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 5.2e-111 405.2 481 49.3
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 6.1e-104 381.7 249 73.9
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 9.2e-100 367.9 332 59.0
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.6e-98 361.7 261 67.4
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 3.1e-95 352.8 247 69.2
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 6.8e-95 351.7 296 57.4
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.0e-94 350.1 296 58.4
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.0e-94 350.1 296 58.4
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.0e-90 336.3 251 66.9
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 2.5e-89 333.2 264 60.2
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.7e-85 320.5 218 72.0
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 2.9e-85 319.7 191 82.2
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.7e-59 233.4 219 56.2
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 6.0e-51 205.7 171 63.7
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.1e-44 184.9 169 57.4
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 2.8e-40 170.2 125 73.6
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.2e-38 164.9 160 48.8
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 7.4e-33 145.6 134 59.0
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-29 134.8 155 52.3
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.0e-26 125.2 122 46.7
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 4.5e-22 109.8 75 73.3
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 5.2e-18 96.3 84 59.5
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.1e-15 86.7 123 42.3
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 4.5e-06 56.6 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 4.5e-06 56.6 48 62.5


User provided reference genes

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