Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 1.3e-169 599.7 320 100.0
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 1.0e-89 334.3 325 59.7
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 5.5e-72 275.4 366 51.4
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 4.7e-71 272.3 369 50.1
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.8e-70 270.4 360 50.8
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.3e-70 270.0 356 50.8
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 2.3e-70 270.0 363 50.1
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 3.0e-70 269.6 355 52.4
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 8.8e-70 268.1 361 52.1
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.2e-69 267.7 352 50.0
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.5e-69 267.3 361 50.1
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 3.3e-69 266.2 367 50.1
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 7.5e-69 265.0 355 49.3
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 2.8e-68 263.1 357 51.8
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 4.8e-68 262.3 377 48.0
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.1e-67 261.2 375 46.4
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 1.4e-67 260.8 365 46.6
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 1.4e-67 260.8 347 50.1
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 1.8e-67 260.4 364 47.3
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 3.1e-67 259.6 345 47.5
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 4.1e-67 259.2 345 47.5
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 7.0e-67 258.5 361 49.0
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 1.2e-66 257.7 351 47.6
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 1.2e-66 257.7 357 48.5
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 2.0e-66 256.9 347 47.3
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 1.0e-65 254.6 358 49.2
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 2.2e-65 253.4 365 47.1
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 2.9e-65 253.1 368 47.3
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 6.5e-65 251.9 365 46.3
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 1.1e-64 251.1 360 49.7
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.5e-64 250.8 327 52.3
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 4.7e-63 245.7 337 50.4
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 5.2e-62 242.3 363 46.3
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.2e-61 241.1 337 50.4
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 5.7e-61 238.8 360 46.9
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 5.7e-61 238.8 378 44.2
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 2.2e-60 236.9 353 47.3
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 1.8e-59 233.8 375 44.5
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 3.1e-59 233.0 380 42.9
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 2.0e-58 230.3 352 46.6
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 5.9e-58 228.8 346 45.7
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 5.0e-57 225.7 346 47.1
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 8.6e-57 224.9 361 44.6
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 8.6e-57 224.9 342 47.7
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 8.6e-57 224.9 343 46.6
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.1e-56 224.6 329 46.5
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.9e-56 223.8 371 45.6
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 2.5e-56 223.4 351 46.7
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 2.5e-56 223.4 344 47.1
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 9.5e-56 221.5 350 47.1
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 9.5e-56 221.5 356 44.1
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 9.5e-56 221.5 329 45.9
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 2.8e-55 219.9 329 45.6
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 6.1e-55 218.8 338 47.0
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.0e-55 218.4 393 40.2
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 4.0e-54 216.1 373 44.5
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 5.2e-54 215.7 324 47.8
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 6.8e-54 215.3 361 45.2
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 7.5e-53 211.8 367 45.2
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 7.5e-53 211.8 429 40.3
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 8.3e-52 208.4 390 43.3
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 2.7e-50 203.4 342 45.6
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 1.0e-49 201.4 371 42.0
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 6.8e-46 188.7 298 43.0
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 2.0e-45 187.2 457 38.3
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 2.0e-45 187.2 284 46.5
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.6e-45 186.8 291 45.0
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 5.7e-45 185.7 346 43.1
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 7.5e-45 185.3 331 43.2
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.8e-43 180.6 282 46.5
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 7.8e-42 175.3 351 41.9
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.7e-41 174.1 346 41.6
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 1.2e-39 167.9 353 40.2
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 3.6e-39 166.4 350 40.6
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 8.9e-38 161.8 351 39.9
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 2.6e-37 160.2 349 40.7
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 2.6e-37 160.2 349 40.7
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 5.8e-37 159.1 417 33.8
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 7.5e-37 158.7 348 40.8
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 7.5e-37 158.7 336 39.6
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 4.9e-36 156.0 343 39.4
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 2.4e-35 153.7 403 36.5
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 3.2e-35 153.3 354 38.4
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 3.2e-35 153.3 354 38.4
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 5.4e-35 152.5 384 36.2
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 2.0e-34 150.6 407 35.1
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 6.0e-34 149.1 329 38.6
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 6.0e-34 149.1 344 37.5
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 7.3e-32 142.1 282 40.8
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 3.6e-31 139.8 354 35.3
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.2e-29 134.8 255 41.2
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 1.3e-28 131.3 279 38.4
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 1.4e-27 127.9 352 34.7
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 2.3e-25 120.6 347 33.4
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 6.6e-25 119.0 320 31.9
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 6.6e-25 119.0 356 35.4
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 6.6e-25 119.0 347 33.7
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 3.3e-24 116.7 325 34.8
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 1.2e-23 114.8 295 37.6
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 1.6e-23 114.4 170 50.6
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 3.6e-23 113.2 368 33.2
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 4.9e-20 102.8 192 40.1
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.2e-13 81.6 302 27.5
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 1.2e-13 81.6 66 68.2
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 2.6e-13 80.5 118 42.4
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.9e-12 77.0 51 66.7
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 2.9e-12 77.0 368 27.4
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-11 75.1 51 64.7
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-11 75.1 51 64.7
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.4e-11 74.7 51 64.7
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-11 73.6 51 62.7
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.2e-11 73.2 51 62.7
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 9.3e-11 72.0 47 68.1
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 1.2e-10 71.6 166 36.7
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.7e-10 70.5 51 60.8
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.7e-10 70.5 51 60.8
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.0e-09 68.6 50 62.0
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-09 68.6 51 60.8
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 2.3e-09 67.4 216 25.9
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 8.1e-07 58.9 40 67.5
SMO361G0449 Selaginella moellendorffii HOM05D063101 ORTHO05D007952 8.1e-07 58.9 177 32.8
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 2.4e-06 57.4 51 52.9
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 3.1e-06 57.0 100 40.0


User provided reference genes

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