Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 1.4e-173 612.8 313 100.0
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 1.4e-91 340.5 294 61.9
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 4.0e-91 339.0 319 57.7
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 1.5e-90 337.0 254 67.3
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 1.3e-89 334.0 270 64.8
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 2.2e-89 333.2 297 61.6
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 3.7e-89 332.4 305 61.6
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 3.7e-89 332.4 230 69.6
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 8.3e-89 331.3 293 59.7
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 1.1e-88 330.9 246 67.5
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 1.4e-88 330.5 240 67.5
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 3.1e-88 329.3 231 69.7
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 5.4e-88 328.6 274 61.3
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 5.4e-88 328.6 304 58.9
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 2.7e-87 326.2 257 65.0
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 4.5e-87 325.5 228 70.2
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.5e-87 325.5 258 64.0
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 5.9e-87 325.1 279 59.1
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 7.8e-87 324.7 314 55.7
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 1.7e-86 323.6 227 69.6
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 1.7e-86 323.6 246 67.1
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 2.3e-86 323.2 246 66.7
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 3.8e-86 322.4 246 66.3
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 5.0e-86 322.0 306 56.9
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.5e-85 320.5 303 58.4
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 2.5e-85 319.7 287 58.9
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 3.3e-85 319.3 294 59.2
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 3.3e-85 319.3 254 65.0
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 4.3e-85 318.9 269 60.2
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 5.6e-85 318.5 265 61.5
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 9.5e-85 317.8 250 65.2
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 9.5e-85 317.8 237 67.5
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 2.1e-84 316.6 317 54.3
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 2.1e-84 316.6 239 64.4
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.8e-84 316.2 237 67.5
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 2.8e-84 316.2 237 67.1
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 1.0e-83 314.3 246 65.9
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 1.0e-83 314.3 232 65.1
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 1.8e-83 313.5 262 63.4
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 2.3e-83 313.2 255 65.5
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 2.3e-83 313.2 239 65.3
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.0e-83 312.4 237 66.2
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 5.2e-83 312.0 227 66.5
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 3.4e-82 309.3 226 67.7
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 7.5e-82 308.1 227 67.0
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 7.5e-82 308.1 226 67.3
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 9.8e-82 307.8 349 51.9
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 9.8e-82 307.8 227 67.0
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 2.2e-81 306.6 261 61.7
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 2.2e-81 306.6 259 60.6
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 2.2e-81 306.6 226 67.7
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.9e-81 306.2 228 68.4
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 3.7e-81 305.8 304 53.3
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 3.7e-81 305.8 261 57.9
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 8.3e-81 304.7 262 61.1
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 8.3e-81 304.7 266 59.8
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 1.1e-80 304.3 268 59.7
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 4.1e-80 302.4 261 60.5
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 4.1e-80 302.4 231 68.0
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 5.4e-80 302.0 260 58.5
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 9.2e-80 301.2 229 65.9
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 1.2e-79 300.8 224 66.5
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 2.7e-79 299.7 309 53.1
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 3.5e-79 299.3 240 60.8
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 6.0e-79 298.5 282 58.2
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 1.0e-78 297.7 262 58.8
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 1.0e-78 297.7 309 53.4
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 2.3e-78 296.6 261 57.9
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 5.0e-78 295.4 260 57.7
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 8.6e-78 294.7 261 57.5
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.1e-77 294.3 271 55.0
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 1.5e-77 293.9 261 56.7
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 1.9e-77 293.5 269 59.1
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 1.9e-77 293.5 258 57.8
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 2.5e-77 293.1 228 65.4
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 2.5e-77 293.1 231 61.5
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 4.3e-77 292.4 266 57.9
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 5.6e-77 292.0 225 65.8
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 7.3e-77 291.6 280 54.3
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 9.5e-77 291.2 258 58.5
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 1.2e-76 290.8 264 58.0
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 4.7e-76 288.9 218 61.9
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 4.7e-76 288.9 252 59.1
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 6.2e-76 288.5 262 55.7
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 8.0e-76 288.1 261 57.5
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 1.1e-75 287.7 226 62.4
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.4e-75 287.3 266 57.5
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 1.4e-75 287.3 257 59.5
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 2.3e-75 286.6 233 62.7
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 3.1e-75 286.2 267 56.9
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 5.2e-75 285.4 212 67.0
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.2e-74 284.3 266 56.8
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 1.2e-74 284.3 230 62.2
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 1.5e-74 283.9 227 62.1
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 2.0e-74 283.5 250 56.8
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 3.4e-74 282.7 309 51.5
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 3.4e-74 282.7 251 60.6
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 7.5e-74 281.6 219 62.6
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 1.3e-73 280.8 294 52.7
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.7e-73 280.4 290 53.8
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 8.3e-73 278.1 303 49.5
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 1.1e-72 277.7 219 64.4
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 2.4e-72 276.6 236 60.2
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 9.2e-72 274.6 273 52.4
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.2e-71 274.2 224 60.7
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 4.6e-71 272.3 229 58.1
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 5.1e-70 268.9 230 56.1
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 6.6e-70 268.5 261 53.3
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 7.3e-69 265.0 202 64.4
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 6.2e-68 261.9 236 59.3
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.1e-67 259.6 294 47.6
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 2.6e-66 256.5 195 62.1
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 7.5e-66 255.0 162 77.2
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 7.5e-66 255.0 268 52.2
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 7.1e-64 248.4 289 48.4
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 9.5e-61 238.0 218 55.0
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.8e-60 236.5 270 47.8
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 4.7e-60 235.7 237 54.0
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 4.0e-59 232.6 147 76.9
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.4e-58 229.2 312 43.3
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 1.3e-57 227.6 184 63.0
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 1.7e-57 227.3 227 58.1
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 2.9e-57 226.5 281 46.3
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 3.8e-57 226.1 218 52.8
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 4.9e-57 225.7 145 74.5
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 3.2e-56 223.0 229 50.2
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 4.2e-56 222.6 247 49.8
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 6.0e-55 218.8 264 45.1
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 7.8e-55 218.4 144 72.9
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 3.0e-54 216.5 157 65.6
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 1.2e-52 211.1 155 65.8
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 2.1e-52 210.3 231 48.1
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.1e-51 208.0 256 49.2
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 2.1e-44 183.7 273 38.1
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.8e-44 183.3 176 56.8
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.6e-42 176.8 157 53.5
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 2.4e-40 170.2 172 52.3
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 9.3e-40 168.3 143 58.0
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 1.6e-39 167.5 176 51.7
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 1.2e-34 151.4 129 58.1
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 1.5e-34 151.0 97 71.1
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 6.0e-31 139.0 212 38.7
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 1.5e-26 124.4 95 62.1
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.9e-24 117.5 152 44.1
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 5.5e-24 115.9 245 33.1
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 1.0e-22 111.7 239 32.2
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 6.9e-19 99.0 116 50.0
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 5.9e-18 95.9 108 48.1
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 8.5e-17 92.0 72 62.5
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.0e-09 68.6 58 53.4
Ca_28882_v3 Cicer arietinum L. HOM05D004983 ORTHO05D005847 1.4e-08 64.7 121 34.7
Cfa021669 Carpinus fangiana HOM05D004983 ORTHO05D005847 7.2e-08 62.4 194 26.3


User provided reference genes

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