Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016492 Daucus carota HOM05D003549 ORTHO05D004223 9.0e-33 143.3 88 100.0
DCAR_021565 Daucus carota HOM05D003549 ORTHO05D004223 1.0e-15 86.7 88 62.5
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 4.8e-10 67.8 76 63.2
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 3.1e-09 65.1 77 58.4
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 4.1e-09 64.7 74 62.2
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 6.9e-09 63.9 86 55.8
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.2e-08 63.2 78 59.0
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 1.2e-08 63.2 86 54.7
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.2e-08 63.2 76 60.5
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.2e-08 63.2 76 60.5
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 1.5e-08 62.8 78 56.4
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 2.0e-08 62.4 86 55.8
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-08 62.4 86 55.8
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 2.0e-08 62.4 81 58.0
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 2.0e-08 62.4 86 54.7
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.6e-08 62.0 86 54.7
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.6e-08 62.0 86 54.7
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.6e-08 62.0 86 54.7
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 2.6e-08 62.0 83 50.6
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.6e-08 62.0 71 62.0
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 2.6e-08 62.0 74 63.5
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 3.4e-08 61.6 76 50.0
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 3.4e-08 61.6 77 50.6
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 3.4e-08 61.6 83 55.4
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 4.5e-08 61.2 74 60.8
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 4.5e-08 61.2 85 51.8
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 5.9e-08 60.8 86 57.0
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 7.7e-08 60.5 76 59.2
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 1.0e-07 60.1 74 62.2
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 1.0e-07 60.1 76 53.9
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 1.0e-07 60.1 76 60.5
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 1.0e-07 60.1 85 54.1
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 1.3e-07 59.7 74 58.1
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 1.3e-07 59.7 76 55.3
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 1.3e-07 59.7 76 51.3
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.3e-07 59.7 74 55.4
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 1.3e-07 59.7 70 62.9
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.3e-07 59.7 74 47.3
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 1.7e-07 59.3 75 57.3
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 1.7e-07 59.3 74 55.4
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.7e-07 59.3 74 59.5
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 2.2e-07 58.9 74 54.1
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 2.2e-07 58.9 71 59.2
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 2.2e-07 58.9 71 59.2
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 2.2e-07 58.9 79 58.2
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 2.9e-07 58.5 76 55.3
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 2.9e-07 58.5 80 55.0
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 3.8e-07 58.2 75 58.7
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 3.8e-07 58.2 76 59.2
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 3.8e-07 58.2 83 48.2
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 3.8e-07 58.2 83 48.2
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 3.8e-07 58.2 76 50.0
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 3.8e-07 58.2 74 52.7
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 3.8e-07 58.2 77 58.4
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 5.0e-07 57.8 75 57.3
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 5.0e-07 57.8 70 55.7
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 5.0e-07 57.8 88 48.9
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 6.5e-07 57.4 75 56.0
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 6.5e-07 57.4 74 45.9
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 6.5e-07 57.4 74 55.4
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 6.5e-07 57.4 84 53.6
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 8.5e-07 57.0 71 59.2
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.4e-06 56.2 74 58.1
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 1.9e-06 55.8 71 59.2
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 1.9e-06 55.8 75 54.7
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 1.9e-06 55.8 75 54.7
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 1.9e-06 55.8 75 54.7
ECA246G5096 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.9e-06 55.8 86 52.3
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 1.9e-06 55.8 86 47.7
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 1.9e-06 55.8 86 53.5
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 1.9e-06 55.8 77 54.5
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.9e-06 55.8 74 50.0
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 2.5e-06 55.5 83 57.8
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 2.5e-06 55.5 77 44.2
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.5e-06 55.5 79 46.8
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.5e-06 55.5 79 46.8
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 3.2e-06 55.1 86 52.3
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 3.2e-06 55.1 85 52.9
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 3.2e-06 55.1 81 55.6
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 4.2e-06 54.7 76 52.6
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 4.2e-06 54.7 76 52.6
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 4.2e-06 54.7 76 52.6
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 4.2e-06 54.7 76 52.6
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 4.2e-06 54.7 72 54.2
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.5e-06 54.3 81 51.9
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.5e-06 54.3 81 51.9
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.5e-06 54.3 81 51.9
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.5e-06 54.3 81 51.9
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 5.5e-06 54.3 81 53.1
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 5.5e-06 54.3 75 54.7
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 7.2e-06 53.9 83 51.8
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 7.2e-06 53.9 83 41.0
Solyc06g071390.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 7.2e-06 53.9 72 56.9
Sopen06g027670 Solanum pennellii HOM05D003549 ORTHO05D004223 7.2e-06 53.9 72 56.9
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 7.2e-06 53.9 82 53.7
Aqoxy3G00999 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 9.4e-06 53.5 76 53.9
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 9.4e-06 53.5 74 55.4
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 9.4e-06 53.5 80 55.0


User provided reference genes

Program Settings