Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 0.0e+00 2239.5 1107 100.0
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 4.0e-287 991.9 1129 50.8
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.3e-285 986.9 1158 50.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.5e-275 952.2 1111 50.0
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.6e-267 926.8 1132 49.4
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 6.7e-250 868.2 1174 45.7
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.1e-249 867.5 1122 46.0
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.3e-248 864.0 1149 46.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 4.8e-248 862.1 1178 44.9
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.4e-247 860.5 1143 45.8
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.8e-247 860.1 1122 47.1
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 4.5e-246 855.5 1188 45.7
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 7.6e-246 854.7 1150 46.5
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.0e-245 854.4 1156 45.8
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 3.8e-245 852.4 1160 45.7
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.1e-244 850.9 1155 46.4
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-244 850.9 1151 46.3
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.1e-244 850.9 1131 46.2
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.4e-244 850.5 880 53.8
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.2e-243 847.4 1167 46.2
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.2e-243 847.4 1162 45.7
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.7e-243 846.3 1149 46.2
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.1e-240 836.6 1122 44.7
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.4e-239 833.2 1142 45.2
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.6e-238 829.7 1106 46.6
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 3.4e-238 829.3 1109 46.3
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.9e-237 826.2 1136 45.4
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 8.4e-237 824.7 1097 45.8
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.4e-236 823.9 1116 45.6
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.6e-235 820.5 1176 45.2
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.1e-235 818.5 1143 45.6
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.3e-234 816.6 1192 43.7
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 3.3e-233 812.8 1218 43.6
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 4.3e-233 812.4 1088 45.0
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 5.3e-231 805.4 1095 44.9
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.9e-231 805.1 1227 43.1
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 3.4e-230 802.7 1129 44.7
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 5.9e-230 802.0 1129 43.9
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 7.7e-230 801.6 1148 44.2
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 5.0e-229 798.9 1128 44.5
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-228 797.7 1169 43.7
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 3.6e-227 792.7 1214 42.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.8e-226 790.4 936 48.7
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 5.7e-225 785.4 1144 44.1
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 6.3e-224 781.9 556 68.0
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.4e-223 780.0 1144 43.4
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 5.3e-223 778.9 1152 44.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 3.4e-222 776.2 1131 44.6
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 8.5e-221 771.5 1131 44.5
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 4.2e-220 769.2 1115 43.0
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.7e-219 766.5 1110 43.8
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 4.7e-219 765.8 1092 43.9
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 5.1e-218 762.3 1127 42.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 6.7e-218 761.9 1129 43.0
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 2.6e-217 760.0 865 50.4
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 4.4e-217 759.2 879 50.5
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 9.7e-217 758.1 1131 42.4
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 6.3e-216 755.4 1166 41.8
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 2.4e-215 753.4 1081 43.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 5.3e-215 752.3 995 43.9
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 2.0e-214 750.4 860 49.7
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.0e-213 748.0 1107 42.3
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.0e-213 748.0 1035 45.6
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 1.3e-213 747.7 1095 44.2
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 2.2e-213 746.9 932 46.4
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 5.0e-213 745.7 1142 42.4
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 6.5e-213 745.3 869 49.6
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.2e-211 741.1 1127 42.1
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.0e-209 733.8 901 45.9
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.2e-208 730.3 1100 41.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.4e-207 727.6 882 47.4
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.4e-207 726.9 995 45.4
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 2.0e-206 723.8 1139 40.6
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 6.5e-205 718.8 995 45.1
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.1e-204 718.0 552 63.8
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.2e-203 714.5 1134 41.5
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 4.7e-203 712.6 1113 41.2
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.0e-202 711.4 1100 41.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.0e-202 709.5 1145 42.2
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 2.4e-199 700.3 1134 40.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 3.1e-199 699.9 1127 40.6
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 3.1e-199 699.9 1147 39.6
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.2e-198 698.0 1191 38.3
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 7.2e-196 688.7 1188 39.6
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 8.0e-195 685.3 1110 41.1
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.5e-193 681.0 997 41.3
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 4.1e-191 672.9 1113 39.9
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.0e-190 670.6 1115 39.2
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 4.5e-190 669.5 1129 39.3
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 7.7e-190 668.7 1124 39.9
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.7e-189 667.5 1124 39.5
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 4.2e-188 662.9 803 48.8
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.6e-185 653.7 1167 38.7
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.3e-184 651.4 833 44.7
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 1.0e-181 641.7 1007 41.6
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.6e-179 634.4 1049 39.4
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 9.5e-172 608.6 1067 39.3
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 3.6e-171 606.7 1042 39.2
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 3.7e-168 596.7 923 41.1
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 3.3e-164 583.6 580 51.4
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 8.4e-152 542.3 1151 35.7
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.8e-137 493.0 894 39.0
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 2.4e-130 471.1 945 36.2
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.0e-126 456.4 516 48.8
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 8.2e-123 446.0 315 67.6
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.7e-120 438.3 532 46.1
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.3e-117 428.7 734 36.2
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 2.8e-115 421.0 510 46.5
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 4.8e-115 420.2 499 44.1
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.1e-114 417.2 645 38.9
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 4.2e-111 407.1 846 34.3
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 5.5e-111 406.8 1104 31.2
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 6.1e-110 403.3 595 41.2
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.6e-86 325.5 693 37.1
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.0e-85 322.8 764 35.5
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 3.5e-81 307.8 228 69.3
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 9.8e-76 289.7 226 62.4
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 4.0e-61 241.1 758 29.8
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.7e-43 182.6 512 33.4
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.8e-29 136.0 275 32.7
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 2.3e-24 119.0 585 28.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.4e-21 109.8 143 46.9
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 3.2e-18 98.6 207 32.9
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 4.2e-18 98.2 80 65.0
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 2.1e-17 95.9 84 54.8
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.7e-17 95.5 173 38.2
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.8e-16 92.8 57 70.2
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 2.3e-16 92.4 49 81.6
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 3.0e-16 92.0 55 72.7
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 3.9e-16 91.7 74 58.1
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 3.3e-15 88.6 53 73.6
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 7.6e-12 77.4 153 35.9
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-10 73.2 116 44.0


User provided reference genes

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