Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016429 Daucus carota HOM05D006000 ORTHO05D007749 1.9e-256 888.6 443 100.0
CSS0019701 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 3.6e-114 416.0 426 51.9
CSS0006429 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 5.2e-113 412.1 426 51.4
Lj9C473G6 Lonicera japonica HOM05D006000 ORTHO05D007749 1.2e-112 411.0 423 54.8
Actinidia36773 Actinidia chinensis HOM05D006000 ORTHO05D007749 5.8e-112 408.7 424 52.4
vmacro16696 Vaccinium macrocarpon HOM05D006000 ORTHO05D007749 6.2e-106 388.7 421 50.6
MD06G1160100 Malus domestica HOM05D006000 ORTHO05D007749 1.8e-105 387.1 425 48.5
MD14G1166100 Malus domestica HOM05D006000 ORTHO05D007749 2.4e-105 386.7 425 47.8
Prupe.5G160400 Prunus persica HOM05D006000 ORTHO05D007749 4.0e-105 386.0 425 47.3
GSVIVG01007577001 Vitis vinifera HOM05D006000 ORTHO05D007749 6.4e-103 378.6 422 47.2
PGSC0003DMG400015231 Solanum tuberosum HOM05D006000 ORTHO05D007749 3.2e-102 376.3 427 46.4
Cfa018908 Carpinus fangiana HOM05D006000 ORTHO05D007749 5.4e-102 375.6 427 47.1
CAN.G472.50 Capsicum annuum HOM05D006000 ORTHO05D007749 4.6e-101 372.5 427 47.3
Solyc03g111660.3 Solanum lycopersicum HOM05D006000 ORTHO05D007749 6.6e-100 368.6 427 46.6
Nitab4.5_0006717g0030 Nicotiana tabacum HOM05D006000 ORTHO05D007749 1.9e-99 367.1 421 47.5
Nitab4.5_0001360g0160 Nicotiana tabacum HOM05D006000 ORTHO05D007749 2.5e-99 366.7 429 47.3
RcHm_v2.0_Chr7g0191691 Rosa chinensis HOM05D006000 ORTHO05D007749 2.5e-99 366.7 422 47.4
Atru.chr9.985 Acer truncatum HOM05D006000 ORTHO05D007749 3.3e-99 366.3 419 47.5
Sopen03g030780 Solanum pennellii HOM05D006000 ORTHO05D007749 3.3e-99 366.3 427 46.1
CANSAT80G1864 Cannabis sativa HOM05D006000 ORTHO05D007749 4.3e-99 365.9 426 46.2
TAR622G0802 Trochodendron aralioides HOM05D006000 ORTHO05D007749 1.3e-98 364.4 426 45.3
Lsat_1_v5_gn_5_13060 Lactuca sativa HOM05D006000 ORTHO05D007749 2.0e-96 357.1 427 47.1
Haze_07292 Corylus avellana HOM05D006000 ORTHO05D007749 5.8e-96 355.5 456 43.9
Gohir.D03G103100 Gossypium hirsutum HOM05D006000 ORTHO05D007749 9.9e-96 354.8 420 45.7
Oeu053502.2 Olea europaea HOM05D006000 ORTHO05D007749 2.2e-95 353.6 423 45.6
Gorai.003G108600 Gossypium raimondii HOM05D006000 ORTHO05D007749 4.9e-95 352.4 420 45.7
Thecc.03G120400 Theobroma cacao HOM05D006000 ORTHO05D007749 4.9e-95 352.4 423 45.6
HanXRQChr05g0156141 Helianthus annuus HOM05D006000 ORTHO05D007749 8.4e-95 351.7 420 46.4
Gohir.A03G063200 Gossypium hirsutum HOM05D006000 ORTHO05D007749 1.9e-94 350.5 418 45.9
Dinv11120 Davidia involucrata HOM05D006000 ORTHO05D007749 4.2e-94 349.4 364 50.3
FAN08G3509 Fragaria x ananassa HOM05D006000 ORTHO05D007749 9.3e-94 348.2 424 43.6
FAN18G3028 Fragaria x ananassa HOM05D006000 ORTHO05D007749 9.3e-94 348.2 422 44.3
FvH4_5g06990 Fragaria vesca HOM05D006000 ORTHO05D007749 1.2e-93 347.8 427 43.3
Peaxi162Scf00089g00935 Petunia axillaris HOM05D006000 ORTHO05D007749 1.6e-93 347.4 419 45.8
QL10p005632 Quercus lobata HOM05D006000 ORTHO05D007749 1.6e-93 347.4 423 44.9
ECA246G4586 Erigeron canadensis HOM05D006000 ORTHO05D007749 2.7e-93 346.7 426 47.2
Sabra15G0111200 Salix brachista HOM05D006000 ORTHO05D007749 5.1e-92 342.4 421 43.0
TWI39G0152 Tripterygium wilfordii HOM05D006000 ORTHO05D007749 2.5e-91 340.1 427 43.3
Nn4g22511 Nelumbo nucifera HOM05D006000 ORTHO05D007749 1.3e-90 337.8 426 43.0
PSO782G4995 Papaver somniferum HOM05D006000 ORTHO05D007749 2.8e-90 336.7 423 42.8
Potri.015G088200 Populus trichocarpa HOM05D006000 ORTHO05D007749 3.6e-90 336.3 423 43.3
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 3.6e-90 336.3 432 43.5
EL10Ac7g18048 Beta vulgaris HOM05D006000 ORTHO05D007749 6.2e-90 335.5 423 40.2
Migut.D02037 Erythranthe guttata HOM05D006000 ORTHO05D007749 1.8e-89 334.0 424 44.3
MSTRG.4336 Avicennia marina HOM05D006000 ORTHO05D007749 5.3e-89 332.4 424 43.2
Manes.06G113400 Manihot esculenta HOM05D006000 ORTHO05D007749 6.9e-89 332.0 427 43.1
AUR62001257 Chenopodium quinoa HOM05D006000 ORTHO05D007749 1.2e-88 331.3 420 42.1
THA.LOC104818202 Tarenaya hassleriana HOM05D006000 ORTHO05D007749 1.5e-88 330.9 422 43.4
Ah.15g095430 Amaranthus hybridus HOM05D006000 ORTHO05D007749 2.0e-88 330.5 438 40.9
Hund05620 Selenicereus undatus HOM05D006000 ORTHO05D007749 3.4e-88 329.7 427 41.5
Rhsim12G0171000 Rhododendron simsii HOM05D006000 ORTHO05D007749 9.9e-88 328.2 382 48.2
Aa31LG4G16970 Aethionema arabicum HOM05D006000 ORTHO05D007749 1.7e-87 327.4 422 43.4
Thhalv10010185m.g Eutrema salsugineum HOM05D006000 ORTHO05D007749 3.8e-87 326.2 424 42.2
ClCG03G003330 Citrullus lanatus HOM05D006000 ORTHO05D007749 3.2e-86 323.2 428 43.5
Sp5g13670 Schrenkiella parvula HOM05D006000 ORTHO05D007749 3.2e-86 323.2 423 43.3
Sed0018918 Sechium edule HOM05D006000 ORTHO05D007749 3.2e-86 323.2 428 42.5
AT3G48380 Arabidopsis thaliana HOM05D006000 ORTHO05D007749 4.2e-86 322.8 422 43.1
Eucgr.B00167 Eucalyptus grandis HOM05D006000 ORTHO05D007749 5.4e-86 322.4 424 41.3
AL5G27780 Arabidopsis lyrata HOM05D006000 ORTHO05D007749 1.2e-85 321.2 424 43.2
CsaV3_1G009140 Cucumis sativus L. HOM05D006000 ORTHO05D007749 2.7e-85 320.1 425 42.1
SalBow8G1380 Salvia bowleyana HOM05D006000 ORTHO05D007749 3.5e-85 319.7 432 44.9
BcaC07g39322 Brassica carinata HOM05D006000 ORTHO05D007749 1.1e-83 314.7 427 42.2
Cc04_g10700 Coffea canephora HOM05D006000 ORTHO05D007749 1.1e-83 314.7 435 42.8
Carub.0005s1454 Capsella rubella HOM05D006000 ORTHO05D007749 3.3e-83 313.2 422 41.9
CARHR157150 Cardamine hirsuta HOM05D006000 ORTHO05D007749 9.6e-83 311.6 424 42.9
Ciclev10024180m.g Citrus clementina HOM05D006000 ORTHO05D007749 2.1e-82 310.5 425 42.6
C08p23370 Brassica napus HOM05D006000 ORTHO05D007749 2.8e-82 310.1 428 42.1
BolC8t49966H Brassica oleracea HOM05D006000 ORTHO05D007749 2.8e-82 310.1 428 42.1
Ca_16102_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 2.8e-82 310.1 429 43.1
Ca_30078_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 2.8e-82 310.1 429 43.1
BcaB01g00818 Brassica carinata HOM05D006000 ORTHO05D007749 8.1e-82 308.5 426 42.0
PGR083G2177 Punica granatum HOM05D006000 ORTHO05D007749 1.1e-81 308.1 426 39.9
Sc10g0010320 Simmondsia chinensis HOM05D006000 ORTHO05D007749 2.4e-81 307.0 424 39.9
MELO3C002321.2 Cucumis melo HOM05D006000 ORTHO05D007749 3.1e-81 306.6 433 42.7
A06p19300 Brassica napus HOM05D006000 ORTHO05D007749 5.3e-81 305.8 429 41.7
BraA06t25013Z Brassica rapa HOM05D006000 ORTHO05D007749 2.6e-80 303.5 429 41.3
Phvul.009G170100 Phaseolus vulgaris HOM05D006000 ORTHO05D007749 3.4e-80 303.1 399 42.6
Psat5g139520 Pisum sativum HOM05D006000 ORTHO05D007749 3.4e-80 303.1 423 41.1
Medtr3g075250 Medicago truncatula HOM05D006000 ORTHO05D007749 1.1e-78 298.1 432 41.2
Cpa.g.sc4.40 Carica papaya HOM05D006000 ORTHO05D007749 4.2e-78 296.2 392 41.6
FAN04G1552 Fragaria x ananassa HOM05D006000 ORTHO05D007749 9.3e-78 295.0 427 40.0
Lj1g0007517 Lotus japonicus HOM05D006000 ORTHO05D007749 9.3e-78 295.0 421 41.3
VMungo1309G2614 Vigna mungo HOM05D006000 ORTHO05D007749 1.2e-77 294.7 420 40.7
Glyma.04G191400 Glycine max HOM05D006000 ORTHO05D007749 7.9e-77 292.0 421 40.9
arahy.Tifrunner.gnm1.ann1.9XY5HM Arachis hypogaea HOM05D006000 ORTHO05D007749 1.0e-76 291.6 419 41.5
Glyma.06G174400 Glycine max HOM05D006000 ORTHO05D007749 2.3e-76 290.4 420 40.7
Lalb_Chr11g0069771 Lupinus albus HOM05D006000 ORTHO05D007749 2.5e-75 287.0 419 41.5
arahy.Tifrunner.gnm1.ann1.1AQ6ST Arachis hypogaea HOM05D006000 ORTHO05D007749 4.8e-74 282.7 399 42.4
Dinv12561 Davidia involucrata HOM05D006000 ORTHO05D007749 4.1e-73 279.6 333 46.2
CDE09G0792 Ceratophyllum demersum HOM05D006000 ORTHO05D007749 3.8e-71 273.1 427 36.3
ATR0824G112 Amborella trichopoda HOM05D006000 ORTHO05D007749 9.3e-70 268.5 425 38.1
HPP92_027096 Vanilla planifolia HOM05D006000 ORTHO05D007749 1.3e-68 264.6 424 34.2
unitig_21.g20436 Utricularia gibba HOM05D006000 ORTHO05D007749 3.9e-68 263.1 428 38.8
CiPaw.12G034200 Carya illinoinensis HOM05D006000 ORTHO05D007749 4.1e-65 253.1 308 43.2
FvH4_5g06921 Fragaria vesca HOM05D006000 ORTHO05D007749 2.9e-63 246.9 271 44.6
TPR.G38611 Trifolium pratense HOM05D006000 ORTHO05D007749 1.9e-62 244.2 459 36.4
FvH4_5g06950 Fragaria vesca HOM05D006000 ORTHO05D007749 2.7e-53 213.8 219 49.3
Os12g0285500 Oryza sativa ssp. japonica HOM05D006000 ORTHO05D007749 1.0e-52 211.8 420 31.4
Actinidia08849 Actinidia chinensis HOM05D006000 ORTHO05D007749 1.1e-46 191.8 421 34.2
Zm00001eb133430 Zea mays HOM05D006000 ORTHO05D007749 9.4e-46 188.7 418 30.1
HPP92_021434 Vanilla planifolia HOM05D006000 ORTHO05D007749 2.9e-39 167.2 368 29.6
TAR622G0554 Trochodendron aralioides HOM05D006000 ORTHO05D007749 1.2e-21 108.6 87 60.9
arahy.Tifrunner.gnm1.ann1.HVEI7F Arachis hypogaea HOM05D006000 ORTHO05D007749 3.6e-21 107.1 88 59.1
Mapoly0004s0201 Marchantia polymorpha HOM05D006000 ORTHO05D007749 3.6e-21 107.1 418 21.1
arahy.Tifrunner.gnm1.ann1.1X7LEL Arachis hypogaea HOM05D000074 ORTHO05D007749 4.9e-18 96.7 333 26.4
Pp3c6_16550 Physcomitrium patens HOM05D006000 ORTHO05D007749 2.3e-15 87.8 425 23.5
FvH4_5g06922 Fragaria vesca HOM05D006000 ORTHO05D007749 6.6e-15 86.3 62 62.9
SMO201G0062 Selaginella moellendorffii HOM05D006000 ORTHO05D007749 1.6e-13 81.6 179 33.5
arahy.Tifrunner.gnm1.ann1.L5KNWH Arachis hypogaea HOM05D006000 ORTHO05D007749 8.3e-10 69.3 99 43.4
AagrBONN_evm.TU.Sc2ySwM_362.2604 Anthoceros agrestis HOM05D006000 ORTHO05D007749 4.1e-09 67.0 207 27.1
arahy.Tifrunner.gnm1.ann1.XFG60B Arachis hypogaea HOM05D006000 ORTHO05D007749 1.6e-08 65.1 99 43.4
SEGI_38992 Sequoiadendron giganteum HOM05D006000 ORTHO05D007749 2.0e-08 64.7 119 31.1


User provided reference genes

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