Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016428 Daucus carota HOM05D006000 ORTHO05D007749 5.2e-150 534.3 254 100.0
CSS0006429 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 9.3e-131 470.3 254 86.6
Migut.D02037 Erythranthe guttata HOM05D006000 ORTHO05D007749 9.3e-131 470.3 254 87.8
GSVIVG01007577001 Vitis vinifera HOM05D006000 ORTHO05D007749 9.3e-131 470.3 253 87.0
Rhsim12G0171000 Rhododendron simsii HOM05D006000 ORTHO05D007749 1.2e-130 469.9 254 87.0
CSS0019701 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 1.6e-130 469.5 254 86.6
Oeu053502.2 Olea europaea HOM05D006000 ORTHO05D007749 2.1e-130 469.2 254 87.4
TWI39G0152 Tripterygium wilfordii HOM05D006000 ORTHO05D007749 2.1e-130 469.2 254 86.6
MSTRG.4336 Avicennia marina HOM05D006000 ORTHO05D007749 8.7e-129 463.8 254 85.8
MD06G1160100 Malus domestica HOM05D006000 ORTHO05D007749 8.7e-129 463.8 254 87.0
Lj9C473G6 Lonicera japonica HOM05D006000 ORTHO05D007749 1.9e-128 462.6 253 87.0
TAR622G0802 Trochodendron aralioides HOM05D006000 ORTHO05D007749 4.3e-128 461.5 254 85.8
Ciclev10024180m.g Citrus clementina HOM05D006000 ORTHO05D007749 7.4e-128 460.7 253 86.2
ECA246G4586 Erigeron canadensis HOM05D006000 ORTHO05D007749 9.6e-128 460.3 253 83.8
Manes.06G113400 Manihot esculenta HOM05D006000 ORTHO05D007749 9.6e-128 460.3 254 83.9
QL10p005632 Quercus lobata HOM05D006000 ORTHO05D007749 1.3e-127 459.9 253 85.0
CiPaw.12G034200 Carya illinoinensis HOM05D006000 ORTHO05D007749 1.6e-127 459.5 254 84.3
Cfa018908 Carpinus fangiana HOM05D006000 ORTHO05D007749 6.2e-127 457.6 252 85.3
Cc04_g10700 Coffea canephora HOM05D006000 ORTHO05D007749 6.2e-127 457.6 254 83.1
Peaxi162Scf00089g00935 Petunia axillaris HOM05D006000 ORTHO05D007749 6.2e-127 457.6 254 83.9
Hund05620 Selenicereus undatus HOM05D006000 ORTHO05D007749 1.1e-126 456.8 254 85.0
MD14G1166100 Malus domestica HOM05D006000 ORTHO05D007749 1.4e-126 456.4 254 84.6
arahy.Tifrunner.gnm1.ann1.1AQ6ST Arachis hypogaea HOM05D006000 ORTHO05D007749 3.1e-126 455.3 253 85.4
Lalb_Chr11g0069771 Lupinus albus HOM05D006000 ORTHO05D007749 3.1e-126 455.3 253 84.2
Prupe.5G160400 Prunus persica HOM05D006000 ORTHO05D007749 3.1e-126 455.3 254 84.6
arahy.Tifrunner.gnm1.ann1.9XY5HM Arachis hypogaea HOM05D006000 ORTHO05D007749 4.0e-126 454.9 253 85.8
Lsat_1_v5_gn_5_13060 Lactuca sativa HOM05D006000 ORTHO05D007749 6.9e-126 454.1 252 84.1
Nitab4.5_0001360g0160 Nicotiana tabacum HOM05D006000 ORTHO05D007749 6.9e-126 454.1 254 83.9
Nitab4.5_0006717g0030 Nicotiana tabacum HOM05D006000 ORTHO05D007749 9.0e-126 453.8 254 83.9
PGSC0003DMG400015231 Solanum tuberosum HOM05D006000 ORTHO05D007749 9.0e-126 453.8 255 84.7
CANSAT80G1864 Cannabis sativa HOM05D006000 ORTHO05D007749 2.0e-125 452.6 254 83.1
Gorai.003G108600 Gossypium raimondii HOM05D006000 ORTHO05D007749 2.6e-125 452.2 254 82.3
Sopen03g030780 Solanum pennellii HOM05D006000 ORTHO05D007749 4.5e-125 451.4 255 83.9
THA.LOC104818202 Tarenaya hassleriana HOM05D006000 ORTHO05D007749 4.5e-125 451.4 254 83.9
AT3G48380 Arabidopsis thaliana HOM05D006000 ORTHO05D007749 7.6e-125 450.7 254 83.1
Gohir.A03G063200 Gossypium hirsutum HOM05D006000 ORTHO05D007749 7.6e-125 450.7 256 82.4
RcHm_v2.0_Chr7g0191691 Rosa chinensis HOM05D006000 ORTHO05D007749 7.6e-125 450.7 254 84.6
Haze_07292 Corylus avellana HOM05D006000 ORTHO05D007749 9.9e-125 450.3 252 84.1
FAN04G1552 Fragaria x ananassa HOM05D006000 ORTHO05D007749 9.9e-125 450.3 254 84.6
BcaC07g39322 Brassica carinata HOM05D006000 ORTHO05D007749 1.3e-124 449.9 254 82.7
C08p23370 Brassica napus HOM05D006000 ORTHO05D007749 1.3e-124 449.9 254 82.7
BcaB01g00818 Brassica carinata HOM05D006000 ORTHO05D007749 1.7e-124 449.5 254 82.7
Sp5g13670 Schrenkiella parvula HOM05D006000 ORTHO05D007749 2.2e-124 449.1 254 83.5
Eucgr.B00167 Eucalyptus grandis HOM05D006000 ORTHO05D007749 2.9e-124 448.7 254 83.1
ClCG03G003330 Citrullus lanatus HOM05D006000 ORTHO05D007749 3.8e-124 448.4 255 83.5
MELO3C002321.2 Cucumis melo HOM05D006000 ORTHO05D007749 3.8e-124 448.4 255 83.9
FvH4_5g06990 Fragaria vesca HOM05D006000 ORTHO05D007749 3.8e-124 448.4 254 84.3
PGR083G2177 Punica granatum HOM05D006000 ORTHO05D007749 3.8e-124 448.4 254 82.7
CARHR157150 Cardamine hirsuta HOM05D006000 ORTHO05D007749 4.9e-124 448.0 254 82.7
HanXRQChr05g0156141 Helianthus annuus HOM05D006000 ORTHO05D007749 6.4e-124 447.6 254 82.3
Psat5g139520 Pisum sativum HOM05D006000 ORTHO05D007749 6.4e-124 447.6 254 83.1
Carub.0005s1454 Capsella rubella HOM05D006000 ORTHO05D007749 8.4e-124 447.2 254 83.1
CsaV3_1G009140 Cucumis sativus L. HOM05D006000 ORTHO05D007749 1.1e-123 446.8 255 83.5
Sed0018918 Sechium edule HOM05D006000 ORTHO05D007749 1.1e-123 446.8 254 83.5
Glyma.06G174400 Glycine max HOM05D006000 ORTHO05D007749 1.4e-123 446.4 253 83.0
VMungo1309G2614 Vigna mungo HOM05D006000 ORTHO05D007749 1.4e-123 446.4 253 82.6
AL5G27780 Arabidopsis lyrata HOM05D006000 ORTHO05D007749 1.9e-123 446.0 254 81.9
Ca_16102_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 1.9e-123 446.0 253 83.0
Ca_30078_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 1.9e-123 446.0 253 83.0
Solyc03g111660.3 Solanum lycopersicum HOM05D006000 ORTHO05D007749 1.9e-123 446.0 258 82.2
Sc10g0010320 Simmondsia chinensis HOM05D006000 ORTHO05D007749 2.4e-123 445.7 254 83.5
A06p19300 Brassica napus HOM05D006000 ORTHO05D007749 3.2e-123 445.3 254 81.9
Thhalv10010185m.g Eutrema salsugineum HOM05D006000 ORTHO05D007749 3.2e-123 445.3 258 82.2
Glyma.04G191400 Glycine max HOM05D006000 ORTHO05D007749 3.2e-123 445.3 253 83.0
Lj1g0007517 Lotus japonicus HOM05D006000 ORTHO05D007749 3.2e-123 445.3 253 82.2
Phvul.009G170100 Phaseolus vulgaris HOM05D006000 ORTHO05D007749 4.2e-123 444.9 253 82.2
Medtr3g075250 Medicago truncatula HOM05D006000 ORTHO05D007749 7.1e-123 444.1 253 83.0
vmacro16696 Vaccinium macrocarpon HOM05D006000 ORTHO05D007749 1.2e-122 443.4 254 83.1
CAN.G472.50 Capsicum annuum HOM05D006000 ORTHO05D007749 2.7e-122 442.2 255 82.4
Aa31LG4G16970 Aethionema arabicum HOM05D006000 ORTHO05D007749 7.9e-122 440.7 254 80.7
PSO782G4995 Papaver somniferum HOM05D006000 ORTHO05D007749 1.0e-121 440.3 253 80.2
EL10Ac7g18048 Beta vulgaris HOM05D006000 ORTHO05D007749 1.8e-121 439.5 254 81.1
FAN18G3028 Fragaria x ananassa HOM05D006000 ORTHO05D007749 1.8e-121 439.5 254 83.1
TPR.G38611 Trifolium pratense HOM05D006000 ORTHO05D007749 1.8e-121 439.5 253 80.6
BolC8t49966H Brassica oleracea HOM05D006000 ORTHO05D007749 2.3e-121 439.1 265 78.9
FAN08G3509 Fragaria x ananassa HOM05D006000 ORTHO05D007749 3.3e-120 435.3 257 82.5
BraA06t25013Z Brassica rapa HOM05D006000 ORTHO05D007749 7.4e-120 434.1 265 78.1
CDE09G0792 Ceratophyllum demersum HOM05D006000 ORTHO05D007749 1.6e-119 433.0 254 78.7
Os12g0285500 Oryza sativa ssp. japonica HOM05D006000 ORTHO05D007749 4.8e-119 431.4 254 79.1
Thecc.03G120400 Theobroma cacao HOM05D006000 ORTHO05D007749 9.0e-118 427.2 249 81.1
HPP92_021434 Vanilla planifolia HOM05D006000 ORTHO05D007749 1.3e-116 423.3 253 77.9
HPP92_027096 Vanilla planifolia HOM05D006000 ORTHO05D007749 2.9e-116 422.2 253 77.9
ATR0824G112 Amborella trichopoda HOM05D006000 ORTHO05D007749 2.5e-115 419.1 253 77.5
AUR62001257 Chenopodium quinoa HOM05D006000 ORTHO05D007749 4.6e-114 414.8 254 77.6
Zm00001eb133430 Zea mays HOM05D006000 ORTHO05D007749 5.7e-112 407.9 289 68.9
Actinidia08849 Actinidia chinensis HOM05D006000 ORTHO05D007749 8.4e-108 394.0 221 83.7
Ah.15g095430 Amaranthus hybridus HOM05D006000 ORTHO05D007749 1.9e-107 392.9 204 87.7
Sabra15G0111200 Salix brachista HOM05D006000 ORTHO05D007749 2.5e-107 392.5 220 85.9
Gohir.D03G103100 Gossypium hirsutum HOM05D006000 ORTHO05D007749 7.2e-107 391.0 223 83.4
SMO201G0062 Selaginella moellendorffii HOM05D006000 ORTHO05D007749 1.3e-105 386.7 253 72.3
Mapoly0004s0201 Marchantia polymorpha HOM05D006000 ORTHO05D007749 5.3e-102 374.8 253 70.0
Pp3c6_16550 Physcomitrium patens HOM05D006000 ORTHO05D007749 5.9e-101 371.3 253 68.0
CBR_g41805 Chara braunii HOM05D006000 ORTHO05D007749 1.5e-93 346.7 255 63.9
unitig_21.g20435 Utricularia gibba HOM05D006000 ORTHO05D007749 2.5e-91 339.3 178 86.0
AagrBONN_evm.TU.Sc2ySwM_362.2604 Anthoceros agrestis HOM05D006000 ORTHO05D007749 7.0e-86 321.2 253 63.6
Cre03.g197900 Chlamydomonas reinhardtii HOM05D006000 ORTHO05D007749 2.5e-83 312.8 254 58.7
HPP92_021417 Vanilla planifolia HOM05D006000 ORTHO05D007749 4.8e-79 298.5 197 72.6
Dinv12561 Davidia involucrata HOM05D006000 ORTHO05D007749 1.2e-77 293.9 149 91.3
Nn4g22511 Nelumbo nucifera HOM05D006000 ORTHO05D007749 1.2e-77 293.9 177 81.4
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 6.5e-68 261.5 258 56.2
Dinv11120 Davidia involucrata HOM05D006000 ORTHO05D007749 2.3e-65 253.1 145 84.1
SalBow8G5300 Salvia bowleyana HOM05D006000 ORTHO05D007749 1.4e-54 217.2 104 93.3
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 1.8e-54 216.9 170 62.9
Actinidia36773 Actinidia chinensis HOM05D006000 ORTHO05D007749 1.6e-50 203.8 181 61.9
arahy.Tifrunner.gnm1.ann1.HVEI7F Arachis hypogaea HOM05D006000 ORTHO05D007749 2.8e-50 203.0 185 60.0
Cpa.g.sc4.41 Carica papaya HOM05D006000 ORTHO05D007749 2.8e-50 203.0 106 83.0
Atru.chr9.985 Acer truncatum HOM05D006000 ORTHO05D007749 2.0e-45 186.8 113 75.2
PRCOL_00005175 Prasinoderma coloniale HOM05D006000 ORTHO05D007749 3.2e-38 162.9 200 44.0
SMO201G0174 Selaginella moellendorffii HOM05D006000 ORTHO05D007749 7.8e-37 158.3 183 48.6
FvH4_5g06930 Fragaria vesca HOM05D006000 ORTHO05D007749 2.8e-34 149.8 137 57.7
SalBow8G1380 Salvia bowleyana HOM05D006000 ORTHO05D007749 9.9e-32 141.4 134 53.7
SGA_v2.0_scaffold115G32113 Striga asiatica HOM05D005956 ORTHO05D007197 3.0e-28 129.8 58 93.1
CAN.G546.38 Capsicum annuum HOM05D006000 ORTHO05D007749 1.8e-25 120.6 86 67.4
Potri.015G088200 Populus trichocarpa HOM05D006000 ORTHO05D007749 3.4e-24 116.3 75 76.0
SMO328G0007 Selaginella moellendorffii HOM05D006000 ORTHO05D007749 6.4e-23 112.1 83 65.1
unitig_21.g20436 Utricularia gibba HOM05D006000 ORTHO05D007749 1.1e-22 111.3 75 72.0
Nitab4.5_0001094g0140 Nicotiana tabacum HOM05D006000 ORTHO05D007749 3.5e-21 106.3 97 53.6
arahy.Tifrunner.gnm1.ann1.0Z5YS0 Arachis hypogaea HOM05D001248 ORTHO05D007749 4.8e-18 95.9 72 61.1
Lsat_1_v5_gn_4_166800 Lactuca sativa HOM05D006000 ORTHO05D018009 4.5e-16 89.4 76 57.9
Lsat_1_v5_gn_3_61521 Lactuca sativa HOM05D006000 ORTHO05D018009 7.6e-16 88.6 74 59.5
Lsat_1_v5_gn_4_154121 Lactuca sativa HOM05D006000 ORTHO05D018009 9.9e-16 88.2 74 58.1
Lsat_1_v5_gn_2_53660 Lactuca sativa HOM05D003480 ORTHO05D018009 4.9e-15 85.9 74 56.8
Lsat_1_v5_gn_4_114361 Lactuca sativa HOM05D003480 ORTHO05D018009 4.9e-15 85.9 74 56.8
Lsat_1_v5_gn_6_19961 Lactuca sativa HOM05D003480 ORTHO05D018009 3.2e-14 83.2 74 56.8
CAN.G1014.24 Capsicum annuum HOM05D000846 ORTHO05D028464 3.1e-09 66.6 93 43.0
CAN.G755.4 Capsicum annuum HOM05D006000 ORTHO05D028464 6.9e-09 65.5 93 41.9
arahy.Tifrunner.gnm1.ann1.1X7LEL Arachis hypogaea HOM05D000074 ORTHO05D007749 6.4e-07 58.9 31 80.6


User provided reference genes

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