Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016415 Daucus carota HOM05D005301 ORTHO05D006433 1.4e-243 845.9 425 100.0
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 5.6e-173 611.3 423 72.3
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 1.5e-170 603.2 466 67.2
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 1.0e-166 590.5 464 66.6
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 1.8e-166 589.7 448 68.3
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 9.6e-165 583.9 420 71.4
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 2.1e-164 582.8 465 65.2
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 2.8e-164 582.4 466 66.3
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 2.8e-164 582.4 466 66.3
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 1.1e-163 580.5 464 65.3
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 6.9e-163 577.8 467 66.0
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 1.5e-162 576.6 464 65.5
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 7.6e-162 574.3 467 64.0
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 8.4e-161 570.9 463 65.9
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 1.9e-160 569.7 464 66.2
Rhsim08G0184700 Rhododendron simsii HOM05D005301 ORTHO05D006433 1.9e-160 569.7 449 65.0
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 7.1e-160 567.8 463 64.8
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 9.3e-160 567.4 460 65.0
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 3.5e-159 565.5 468 63.2
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 4.6e-159 565.1 459 65.1
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 1.0e-158 563.9 466 64.8
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 1.3e-158 563.5 442 64.9
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 3.9e-158 562.0 465 64.7
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 3.9e-158 562.0 461 64.0
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 5.1e-158 561.6 467 64.9
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 6.7e-158 561.2 469 64.2
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 8.7e-158 560.8 461 63.6
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 2.5e-157 559.3 461 63.3
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 3.3e-157 558.9 459 63.4
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 7.4e-157 557.8 457 64.3
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 7.4e-157 557.8 462 63.4
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 2.2e-156 556.2 455 65.1
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 8.2e-156 554.3 463 63.1
VMungo1309G2118 Vigna mungo HOM05D005301 ORTHO05D006433 2.4e-155 552.7 454 63.9
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 6.9e-155 551.2 418 67.9
Ca_16092_v3 Cicer arietinum L. HOM05D005301 ORTHO05D006433 9.0e-155 550.8 417 67.9
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 1.5e-154 550.1 467 63.2
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 1.5e-154 550.1 456 63.8
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 4.5e-154 548.5 455 64.0
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 7.6e-154 547.7 470 63.0
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 3.8e-153 545.4 464 63.4
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 8.5e-153 544.3 459 62.7
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 1.4e-152 543.5 473 61.7
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 1.4e-152 543.5 454 63.7
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 1.9e-152 543.1 459 62.7
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 4.2e-152 542.0 466 63.3
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 4.6e-151 538.5 457 62.4
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 6.1e-151 538.1 485 61.0
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 7.9e-151 537.7 460 61.7
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 1.0e-150 537.3 455 62.0
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 1.4e-150 537.0 460 62.0
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.4e-150 537.0 460 62.0
AUR62001274 Chenopodium quinoa HOM05D005301 ORTHO05D006433 3.9e-150 535.4 401 69.1
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 3.9e-150 535.4 456 61.4
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 5.1e-150 535.0 453 62.3
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 1.1e-149 533.9 454 63.0
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 2.5e-149 532.7 456 62.1
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 3.3e-149 532.3 458 62.4
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 3.3e-149 532.3 460 61.7
TPR.G3295 Trifolium pratense HOM05D005301 ORTHO05D006433 9.7e-149 530.8 460 62.0
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 1.3e-148 530.4 457 62.6
COL.COLO4_09264 Corchorus olitorius HOM05D005301 ORTHO05D006433 1.7e-148 530.0 391 68.3
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 6.3e-148 528.1 468 61.3
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 6.3e-148 528.1 440 62.7
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 1.4e-147 526.9 447 62.2
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.8e-147 526.6 475 60.2
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 3.4e-146 522.3 492 57.9
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 7.7e-146 521.2 460 60.7
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 2.2e-145 519.6 461 60.5
Ah.08g218140 Amaranthus hybridus HOM05D005301 ORTHO05D006433 1.4e-144 516.9 448 60.9
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 9.4e-144 514.2 462 59.5
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 1.6e-143 513.5 459 60.1
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 2.7e-143 512.7 461 60.7
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 7.9e-143 511.1 468 58.8
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 1.0e-142 510.8 460 60.2
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 1.8e-142 510.0 460 59.1
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 6.7e-142 508.1 460 59.3
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 6.7e-142 508.1 460 60.2
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 1.1e-141 507.3 460 60.4
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 2.0e-141 506.5 462 60.2
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 5.3e-139 498.4 472 57.6
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 6.5e-137 491.5 463 57.9
MELO3C026231.2 Cucumis melo HOM05D005301 ORTHO05D006433 1.4e-136 490.3 457 58.6
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 1.6e-135 486.9 475 58.3
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 2.1e-135 486.5 470 57.7
Hund05643 Selenicereus undatus HOM05D005301 ORTHO05D006433 4.7e-135 485.3 466 57.7
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 1.0e-134 484.2 437 57.7
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 4.4e-133 478.8 473 57.9
Lj9A475G62 Lonicera japonica HOM05D005301 ORTHO05D006433 5.7e-133 478.4 456 59.6
Eucgr.B00150 Eucalyptus grandis HOM05D005301 ORTHO05D006433 1.3e-132 477.2 454 58.6
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 4.5e-130 468.8 425 59.8
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 5.0e-129 465.3 419 59.4
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 1.5e-128 463.8 396 60.6
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 7.5e-125 451.4 406 59.1
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 5.9e-122 441.8 382 60.7
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 5.7e-117 425.2 381 60.4
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 1.1e-115 421.0 462 50.2
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 1.2e-114 417.5 408 55.4
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 9.5e-112 407.9 464 47.6
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 8.0e-111 404.8 460 52.4
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 2.0e-109 400.2 464 49.1
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.6e-103 380.6 465 45.2
unitig_899.g15425 Utricularia gibba HOM05D005301 ORTHO05D006433 1.6e-98 364.0 471 48.0
Hund05630 Selenicereus undatus HOM05D005301 ORTHO05D006433 7.8e-98 361.7 380 53.4
HPP92_004591 Vanilla planifolia HOM05D005301 ORTHO05D006433 3.9e-97 359.4 391 51.7
CSS0025438 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 1.6e-90 337.4 298 62.4
CBR_g40809 Chara braunii HOM05D005301 ORTHO05D006433 6.8e-86 322.0 528 38.1
MBI06_g32519_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 8.9e-78 295.0 271 60.5
Cpa.g.sc52.37 Carica papaya HOM05D005301 ORTHO05D006433 1.2e-74 284.6 232 62.5
SEGI_14135 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 4.2e-67 259.6 344 46.8
Cpa.g.sc52.36 Carica papaya HOM05D005301 ORTHO05D006433 1.6e-66 257.7 221 63.3
QL04p021669 Quercus lobata HOM05D005301 ORTHO05D006433 1.8e-62 244.2 139 81.3
Actinidia19384 Actinidia chinensis HOM05D005301 ORTHO05D006433 1.6e-39 167.9 355 36.9
SMO200G0253 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 4.2e-35 153.3 427 30.0
SMO200G0172 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.2e-34 151.8 485 29.1
SMO307G0058 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 1.5e-32 144.8 191 44.5
MCO16G658 Micromonas commoda HOM05D005301 ORTHO05D006433 7.4e-32 142.5 277 31.0
PRCOL_00006105 Prasinoderma coloniale HOM05D005301 ORTHO05D006433 9.1e-30 135.6 260 33.8
HPP92_004592 Vanilla planifolia HOM05D004180 ORTHO05D005323 2.5e-27 127.5 89 75.3
Lsat_1_v5_gn_9_521 Lactuca sativa HOM05D005301 ORTHO05D006433 9.4e-27 125.6 70 82.9
Lsat_1_v5_gn_2_63001 Lactuca sativa HOM05D005301 ORTHO05D006433 6.1e-26 122.9 70 81.4
Cre09.g398200 Chlamydomonas reinhardtii HOM05D005301 ORTHO05D006433 2.6e-24 117.5 310 28.7
SMO200G0119 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.3e-23 112.8 396 27.8
SMO024G0003 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.5e-19 101.7 146 43.8
SMO089G0014 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 4.2e-19 100.1 157 42.7
SMO001G0006 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 5.5e-19 99.8 424 27.4
Peaxi162Scf00089g00716 Petunia axillaris HOM05D005301 ORTHO05D006433 2.6e-16 90.9 58 86.2
HPP92_004584 Vanilla planifolia HOM05D005301 ORTHO05D006433 2.8e-15 87.4 44 77.3
SMO200G0133 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 7.0e-14 82.8 61 62.3
SMO089G0017 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.5e-13 80.5 61 60.7
SMO200G0165 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 4.5e-13 80.1 196 35.2
Nitab4.5_0013392g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.9e-12 77.4 41 85.4
Cre04.g217938 Chlamydomonas reinhardtii HOM05D005301 ORTHO05D006433 5.0e-12 76.6 234 26.9
DCAR_016418 Daucus carota HOM05D000230 ORTHO05D017779 9.7e-08 62.4 34 94.1
Cre04.g217925 Chlamydomonas reinhardtii HOM05D039214 ORTHO05D006433 1.7e-07 61.6 249 25.7
Lj9A475G63 Lonicera japonica HOM05D005301 ORTHO05D006433 3.7e-07 60.5 29 82.8
MCO07G635 Micromonas commoda HOM05D001137 ORTHO05D003111 6.3e-07 59.7 118 30.5


User provided reference genes

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