Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016399 Daucus carota HOM05D002380 ORTHO05D175910 1.9e-56 222.2 110 100.0
SalBow4G1427 Salvia bowleyana HOM05D002380 ORTHO05D006960 7.5e-29 130.6 107 63.6
Migut.N00867 Erythranthe guttata HOM05D002380 ORTHO05D006960 3.7e-28 128.3 97 66.0
MSTRG.27885 Avicennia marina HOM05D002380 ORTHO05D006960 4.9e-28 127.9 97 66.0
Oeu016644.1 Olea europaea HOM05D002380 ORTHO05D006960 4.9e-28 127.9 97 66.0
ECA236G1140 Erigeron canadensis HOM05D002380 ORTHO05D006960 8.3e-28 127.1 97 66.0
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.1e-27 126.7 97 66.0
Manes.07G031400 Manihot esculenta HOM05D002380 ORTHO05D006960 1.9e-27 125.9 97 64.9
Dinv29685 Davidia involucrata HOM05D002380 ORTHO05D006960 2.4e-27 125.6 97 67.0
HanXRQChr04g0109261 Helianthus annuus HOM05D002380 ORTHO05D006960 2.4e-27 125.6 97 64.9
HanXRQChr15g0469711 Helianthus annuus HOM05D002380 ORTHO05D006960 2.4e-27 125.6 97 64.9
Lsat_1_v5_gn_9_83520 Lactuca sativa HOM05D002380 ORTHO05D006960 2.4e-27 125.6 97 64.9
Cpa.g.sc173.3 Carica papaya HOM05D002380 ORTHO05D006960 4.1e-27 124.8 97 66.0
vmacro19822 Vaccinium macrocarpon HOM05D002380 ORTHO05D006960 5.4e-27 124.4 97 63.9
Ciclev10000109m.g Citrus clementina HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 66.0
Manes.10G105800 Manihot esculenta HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 63.9
Rhsim11G0117400 Rhododendron simsii HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 64.9
Hund15344 Selenicereus undatus HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 62.9
TPR.G5956 Trifolium pratense HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 63.9
TWI23G0559 Tripterygium wilfordii HOM05D002380 ORTHO05D006960 7.1e-27 124.0 94 67.0
vmacro23029 Vaccinium macrocarpon HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 64.9
vmacro23188 Vaccinium macrocarpon HOM05D002380 ORTHO05D006960 7.1e-27 124.0 97 64.9
CiPaw.05G001100 Carya illinoinensis HOM05D002380 ORTHO05D006960 9.2e-27 123.6 97 62.9
Ca_00015_v3 Cicer arietinum L. HOM05D002380 ORTHO05D006960 9.2e-27 123.6 97 63.9
DCAR_001729 Daucus carota HOM05D002380 ORTHO05D006960 1.2e-26 123.2 97 66.0
Duzib192G0099 Durio zibethinus HOM05D002380 ORTHO05D006960 1.2e-26 123.2 97 63.9
Hma1.2p1_3305F.1_g335100 Hydrangea macrophylla HOM05D002380 ORTHO05D006960 1.2e-26 123.2 97 62.9
SGA_v2.0_scaffold8G04465 Striga asiatica HOM05D002380 ORTHO05D006960 1.2e-26 123.2 97 64.9
Actinidia11733 Actinidia chinensis HOM05D002380 ORTHO05D006960 1.6e-26 122.9 97 64.9
Actinidia25324 Actinidia chinensis HOM05D002380 ORTHO05D006960 1.6e-26 122.9 97 64.9
Eucgr.G00060 Eucalyptus grandis HOM05D002380 ORTHO05D006960 1.6e-26 122.9 97 62.9
Oeu043598.1 Olea europaea HOM05D002380 ORTHO05D006960 1.6e-26 122.9 97 63.9
RcHm_v2.0_Chr7g0218921 Rosa chinensis HOM05D002380 ORTHO05D006960 1.6e-26 122.9 94 67.0
MELO3C016448.2 Cucumis melo HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 63.9
CsaV3_3G006730 Cucumis sativus L. HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 63.9
Glyma.12G163700 Glycine max HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 62.9
MD08G1249200 Malus domestica HOM05D002380 ORTHO05D006960 2.1e-26 122.5 94 67.0
Medtr2g005110 Medicago truncatula HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 62.9
Phvul.006G221800 Phaseolus vulgaris HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 62.9
Psat1g223680 Pisum sativum HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 62.9
Prupe.1G586400 Prunus persica HOM05D002380 ORTHO05D006960 2.1e-26 122.5 94 67.0
Sc03g0005740 Simmondsia chinensis HOM05D002380 ORTHO05D006960 2.1e-26 122.5 97 61.9
Actinidia01643 Actinidia chinensis HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 64.9
Cfa004427 Carpinus fangiana HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
ClCG10G007520 Citrullus lanatus HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 63.9
Glyma.16G000200 Glycine max HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Gohir.A05G109500 Gossypium hirsutum HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Gohir.A06G115700 Gossypium hirsutum HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Gohir.D05G109900 Gossypium hirsutum HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Gorai.009G114000 Gossypium raimondii HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Gorai.010G143100 Gossypium raimondii HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Lj2g0027017 Lotus japonicus HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
PGR042G1044 Punica granatum HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 63.9
THA.LOC104800334 Tarenaya hassleriana HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
Thecc.06G020600 Theobroma cacao HOM05D002380 ORTHO05D006960 2.7e-26 122.1 97 62.9
arahy.Tifrunner.gnm1.ann1.551JVB Arachis hypogaea HOM05D002380 ORTHO05D006960 3.5e-26 121.7 97 63.9
arahy.Tifrunner.gnm1.ann1.QHFI3V Arachis hypogaea HOM05D002380 ORTHO05D006960 3.5e-26 121.7 97 63.9
MBI03_g21084_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D006960 3.5e-26 121.7 97 61.9
Sed0014048 Sechium edule HOM05D002380 ORTHO05D006960 3.5e-26 121.7 94 66.0
CSS0029934 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D006960 4.6e-26 121.3 94 66.0
CSS0043519 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D006960 4.6e-26 121.3 94 66.0
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 4.6e-26 121.3 97 63.9
Peaxi162Scf00011g02119 Petunia axillaris HOM05D002380 ORTHO05D006960 4.6e-26 121.3 97 63.9
Solyc01g102940.3 Solanum lycopersicum HOM05D002380 ORTHO05D006960 4.6e-26 121.3 97 63.9
Sopen01g045350 Solanum pennellii HOM05D002380 ORTHO05D006960 4.6e-26 121.3 97 63.9
FvH4_5g27550 Fragaria vesca HOM05D002380 ORTHO05D006960 6.0e-26 120.9 94 66.0
VMungo0540G1526 Vigna mungo HOM05D002380 ORTHO05D006960 6.0e-26 120.9 97 61.9
MD15G1443800 Malus domestica HOM05D002380 ORTHO05D006960 7.8e-26 120.6 94 66.0
Nn5g27142 Nelumbo nucifera HOM05D002380 ORTHO05D006960 7.8e-26 120.6 97 62.9
Potri.004G229800 Populus trichocarpa HOM05D002380 ORTHO05D006960 7.8e-26 120.6 94 64.9
CSS0006349 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D006960 1.0e-25 120.2 97 62.9
CANSAT01G1628 Cannabis sativa HOM05D002380 ORTHO05D006960 1.3e-25 119.8 97 63.9
CAN.G855.61 Capsicum annuum HOM05D002380 ORTHO05D006960 1.3e-25 119.8 97 63.9
Cc02_g23660 Coffea canephora HOM05D002380 ORTHO05D006960 1.3e-25 119.8 97 63.9
SGA_v2.0_scaffold100G29554 Striga asiatica HOM05D002380 ORTHO05D006960 1.3e-25 119.8 97 61.9
Atru.chr6.195 Acer truncatum HOM05D002380 ORTHO05D006960 1.7e-25 119.4 94 64.9
Dinv29639 Davidia involucrata HOM05D002380 ORTHO05D006960 1.7e-25 119.4 97 61.9
Migut.B00709 Erythranthe guttata HOM05D002380 ORTHO05D006960 1.7e-25 119.4 96 63.5
Lalb_Chr18g0061151 Lupinus albus HOM05D002380 ORTHO05D006960 1.7e-25 119.4 97 61.9
PGSC0003DMG400020720 Solanum tuberosum HOM05D002380 ORTHO05D006960 1.7e-25 119.4 97 62.9
THA.LOC104809041 Tarenaya hassleriana HOM05D002380 ORTHO05D006960 1.7e-25 119.4 94 63.8
Ah.02g128480 Amaranthus hybridus HOM05D002380 ORTHO05D006960 2.3e-25 119.0 98 59.2
Gohir.D06G122900 Gossypium hirsutum HOM05D002380 ORTHO05D006960 2.3e-25 119.0 97 61.9
ATR1089G010 Amborella trichopoda HOM05D002380 ORTHO05D006960 3.0e-25 118.6 97 60.8
Sed0016889 Sechium edule HOM05D002380 ORTHO05D006960 3.0e-25 118.6 97 62.9
Aqoxy6G00017 Aquilegia oxysepala HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 61.9
AL8G23780 Arabidopsis lyrata HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
AT5G49810 Arabidopsis thaliana HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
BcaB05g24066 Brassica carinata HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
BcaC03g14666 Brassica carinata HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
A02p12930 Brassica napus HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
C02p21040 Brassica napus HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
BolC2t08245H Brassica oleracea HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
BraA02t06347Z Brassica rapa HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
Carub.0008s0969 Capsella rubella HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
CARHR258960 Cardamine hirsuta HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
Thhalv10028379m.g Eutrema salsugineum HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
Lsat_1_v5_gn_9_125160 Lactuca sativa HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 61.9
Sp6g11200 Schrenkiella parvula HOM05D002380 ORTHO05D006960 3.9e-25 118.2 97 60.8
Aa31sc192G20 Aethionema arabicum HOM05D002380 ORTHO05D006960 6.6e-25 117.5 94 62.8
TAR381G0848 Trochodendron aralioides HOM05D002380 ORTHO05D006960 1.9e-24 115.9 97 61.9
GSVIVG01023133001 Vitis vinifera HOM05D002380 ORTHO05D006960 1.9e-24 115.9 97 60.8
EL10Ac6g13966 Beta vulgaris HOM05D002380 ORTHO05D006960 2.5e-24 115.5 97 59.8
QL02p103637 Quercus lobata HOM05D002380 ORTHO05D006960 4.3e-24 114.8 97 60.8
SEGI_21259 Sequoiadendron giganteum HOM05D002380 ORTHO05D006960 5.6e-24 114.4 97 57.7
Zm00001eb356170 Zea mays HOM05D002380 ORTHO05D006960 9.5e-24 113.6 94 61.7
Os05g0105000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D006960 1.2e-23 113.2 94 60.6
AUR62032480 Chenopodium quinoa HOM05D002380 ORTHO05D006960 1.6e-23 112.8 97 57.7
AUR62042248 Chenopodium quinoa HOM05D002380 ORTHO05D006960 1.6e-23 112.8 97 57.7
Haze_09967 Corylus avellana HOM05D002380 ORTHO05D006960 1.6e-23 112.8 97 58.8
PSO210G3401 Papaver somniferum HOM05D002380 ORTHO05D006960 1.6e-23 112.8 97 60.8
HPP92_001968 Vanilla planifolia HOM05D002380 ORTHO05D006960 1.6e-23 112.8 94 58.5
PSO528G0147 Papaver somniferum HOM05D002380 ORTHO05D006960 2.8e-23 112.1 97 58.8
PSO447G0289 Papaver somniferum HOM05D002380 ORTHO05D006960 1.4e-22 109.8 97 59.8
SMO301G0051 Selaginella moellendorffii HOM05D002380 ORTHO05D006960 2.2e-20 102.4 97 52.6
Sabra01G0175000 Salix brachista HOM05D002380 ORTHO05D006960 8.4e-20 100.5 94 57.4
FAN13G2214 Fragaria x ananassa HOM05D002380 ORTHO05D006960 1.4e-19 99.8 94 57.4
FAN18G1053 Fragaria x ananassa HOM05D002380 ORTHO05D006960 1.4e-19 99.8 94 57.4
Actinidia00145 Actinidia chinensis HOM05D002380 ORTHO05D006960 2.4e-19 99.0 89 58.4
Lj9C258G8 Lonicera japonica HOM05D002380 ORTHO05D006960 3.2e-19 98.6 97 55.7
AagrBONN_evm.TU.Sc2ySwM_117.3323 Anthoceros agrestis HOM05D002380 ORTHO05D006960 1.3e-17 93.2 96 52.1
Pp3c2_34390 Physcomitrium patens HOM05D002380 ORTHO05D006960 1.3e-17 93.2 97 49.5
Pp3c11_2820 Physcomitrium patens HOM05D002380 ORTHO05D006960 3.9e-17 91.7 94 51.1
Pp3c11_2824 Physcomitrium patens HOM05D002380 ORTHO05D006960 3.9e-17 91.7 94 51.1
Mapoly0008s0067 Marchantia polymorpha HOM05D002380 ORTHO05D006960 6.6e-17 90.9 97 49.5
COL.COLO4_31108 Corchorus olitorius HOM05D002380 ORTHO05D006960 3.1e-14 82.0 42 85.7
arahy.Tifrunner.gnm1.ann1.GM2IKF Arachis hypogaea HOM05D000651 ORTHO05D016628 1.3e-12 76.6 67 59.7
FAN08G1900 Fragaria x ananassa HOM05D002380 ORTHO05D006960 2.9e-12 75.5 36 94.4
HPP92_002029 Vanilla planifolia HOM05D002380 ORTHO05D006960 2.7e-10 68.9 43 74.4
Lj5A286G24 Lonicera japonica HOM05D002380 ORTHO05D006960 2.5e-08 62.4 32 81.2
CDE04G0097 Ceratophyllum demersum HOM05D002380 ORTHO05D006960 4.8e-07 58.2 46 56.5


User provided reference genes

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