Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 6.1e-216 753.8 367 100.0
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.0e-138 497.3 380 69.5
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.0e-138 497.3 380 69.5
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 6.6e-138 494.6 376 68.1
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 3.6e-136 488.8 377 68.4
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 3.1e-135 485.7 391 66.0
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.1e-131 473.0 414 63.0
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 7.9e-131 471.1 389 67.9
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.8e-130 469.9 382 65.4
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 6.7e-130 468.0 381 66.1
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 8.7e-130 467.6 395 64.3
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.5e-129 466.1 381 65.6
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 4.3e-129 465.3 388 64.7
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 4.3e-129 465.3 389 65.3
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 9.6e-129 464.2 367 67.6
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.1e-128 463.0 418 62.4
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.1e-127 460.7 385 64.7
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.1e-127 460.7 386 64.2
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.1e-127 460.7 385 64.7
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.8e-127 459.9 409 61.9
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 3.1e-127 459.1 410 61.7
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 3.1e-127 459.1 389 64.5
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 4.0e-127 458.8 402 62.4
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 4.0e-127 458.8 371 66.6
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.5e-126 456.8 387 63.8
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 2.6e-126 456.1 384 64.6
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.2e-125 453.0 378 64.0
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 2.9e-125 452.6 394 63.2
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 3.8e-125 452.2 392 62.2
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 4.9e-125 451.8 408 61.3
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 4.9e-125 451.8 390 64.1
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 6.4e-125 451.4 409 61.1
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.9e-124 449.9 396 61.9
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.4e-124 449.5 382 63.4
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 3.2e-124 449.1 381 63.3
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 5.5e-124 448.4 383 63.7
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 7.1e-124 448.0 393 62.1
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.1e-123 446.4 417 60.0
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 2.1e-123 446.4 422 59.2
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 2.7e-123 446.0 395 62.0
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 2.7e-123 446.0 405 61.2
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 3.5e-123 445.7 398 62.3
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 4.6e-123 445.3 393 63.4
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 7.9e-123 444.5 426 59.4
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.8e-122 443.4 399 61.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.3e-122 443.0 412 60.0
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 3.9e-122 442.2 376 63.0
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.5e-121 439.5 399 60.7
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 9.6e-121 437.6 417 58.8
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.3e-120 437.2 391 61.9
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 2.8e-120 436.0 365 64.4
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.8e-120 436.0 399 60.9
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 4.8e-120 435.3 358 61.7
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 6.2e-120 434.9 383 61.6
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 8.2e-120 434.5 382 60.7
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 8.2e-120 434.5 395 60.8
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.8e-119 433.3 358 61.5
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 4.0e-119 432.2 389 61.7
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 6.9e-119 431.4 401 57.9
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.5e-118 430.3 383 60.3
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.0e-118 429.9 397 60.2
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 5.8e-118 428.3 416 57.7
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 7.6e-118 427.9 413 57.6
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.3e-117 427.2 408 57.8
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.7e-117 426.8 349 64.2
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 2.2e-117 426.4 370 61.1
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 8.4e-117 424.5 405 57.3
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.4e-116 423.7 364 62.6
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 5.5e-116 421.8 391 58.6
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.2e-115 420.6 360 60.8
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-115 420.2 399 57.1
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-115 420.2 409 57.0
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.6e-115 420.2 409 57.0
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 3.5e-115 419.1 408 55.4
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 4.6e-115 418.7 409 56.7
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 4.6e-115 418.7 409 56.7
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 4.6e-115 418.7 412 56.8
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 6.0e-115 418.3 387 58.4
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.0e-114 417.5 411 55.7
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.8e-114 416.8 396 57.1
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 3.0e-114 416.0 399 56.4
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 3.0e-114 416.0 399 56.4
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 5.1e-114 415.2 325 65.8
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 8.7e-114 414.5 403 56.6
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.5e-113 413.7 398 56.8
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 4.3e-113 412.1 357 61.3
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.6e-112 410.2 403 55.8
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.7e-112 409.1 348 66.1
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.8e-112 408.7 413 55.7
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 6.3e-112 408.3 327 66.1
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 8.2e-112 407.9 409 56.0
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 3.1e-111 406.0 392 57.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.0e-111 404.4 404 55.4
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.2e-110 404.1 340 63.5
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 2.0e-110 403.3 405 55.6
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.6e-110 402.9 423 54.4
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.5e-110 402.1 420 54.5
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 2.2e-109 399.8 370 60.3
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 6.1e-107 391.7 363 57.9
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 7.9e-107 391.3 331 61.6
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.1e-105 387.5 343 60.1
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.9e-105 386.7 375 55.5
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 3.7e-104 382.5 359 57.4
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.8e-103 380.2 399 54.1
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 3.1e-103 379.4 303 66.7
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.9e-101 372.9 348 57.8
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.2e-100 369.0 295 66.4
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.1e-99 366.7 395 52.9
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 3.6e-99 365.9 398 52.3
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.1e-99 365.2 398 52.0
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 7.9e-99 364.8 395 52.4
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.0e-98 364.4 396 51.0
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-96 357.5 395 51.4
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.1e-95 354.4 335 60.0
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-95 353.6 413 49.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.9e-93 346.3 394 48.7
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 3.8e-93 345.9 377 52.0
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.7e-88 330.5 384 49.0
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 9.1e-87 324.7 402 50.7
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.6e-86 323.9 324 55.9
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.3e-85 320.9 346 50.0
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.1e-83 313.5 332 52.7
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.8e-82 310.5 332 50.6
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 3.7e-80 302.8 170 83.5
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 8.2e-80 301.6 292 54.8
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 4.5e-78 295.8 367 49.0
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.1e-76 291.2 161 82.6
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 8.0e-67 258.5 276 55.1
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 2.7e-62 243.4 267 53.9
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 3.3e-60 236.5 129 84.5
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 3.5e-54 216.5 259 53.7
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 4.6e-54 216.1 115 84.3
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 7.3e-52 208.8 309 45.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 3.6e-51 206.5 114 80.7
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 2.0e-46 190.7 306 39.5
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.0e-45 186.8 113 72.6
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.2e-42 176.0 167 53.3
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 9.9e-41 171.8 92 82.6
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.2e-38 164.9 155 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 2.6e-33 147.1 271 36.9
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 6.6e-29 132.5 143 53.1
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 4.6e-22 109.8 86 65.1
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 4.9e-16 89.7 93 52.7
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.5e-14 83.6 70 52.9


User provided reference genes

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