Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 2.2e-180 635.6 332 100.0
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 8.5e-76 288.1 146 99.3
DCAR_008649 Daucus carota HOM05D008545 ORTHO05D010341 1.6e-29 134.4 147 55.8
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 9.9e-16 88.6 160 36.2
Hma1.2p1_0351F.1_g132900 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 5.4e-14 82.8 105 51.4
Actinidia37590 Actinidia chinensis HOM05D000836 ORTHO05D000709 1.0e-12 78.6 105 48.6
Lj1C85G3 Lonicera japonica HOM05D000836 ORTHO05D000709 1.3e-12 78.2 172 36.6
Nitab4.5_0003866g0030 Nicotiana tabacum HOM05D000836 ORTHO05D000709 2.3e-12 77.4 101 48.5
SalBow2G2753 Salvia bowleyana HOM05D000836 ORTHO05D000709 2.3e-12 77.4 105 48.6
Actinidia09484 Actinidia chinensis HOM05D000836 ORTHO05D000709 3.0e-12 77.0 105 48.6
Cc01_g17100 Coffea canephora HOM05D000836 ORTHO05D000709 3.0e-12 77.0 111 48.6
Lj2A1132G71 Lonicera japonica HOM05D000836 ORTHO05D000709 5.1e-12 76.3 105 48.6
PGSC0003DMG400017653 Solanum tuberosum HOM05D000836 ORTHO05D000709 6.7e-12 75.9 101 47.5
HanXRQChr10g0279751 Helianthus annuus HOM05D000836 ORTHO05D000709 1.5e-11 74.7 264 30.7
Solyc09g061290.3 Solanum lycopersicum HOM05D000836 ORTHO05D000709 1.5e-11 74.7 101 46.5
Sopen09g024030 Solanum pennellii HOM05D000836 ORTHO05D000709 1.5e-11 74.7 101 46.5
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 1.9e-11 74.3 164 36.0
PGSC0003DMG400020093 Solanum tuberosum HOM05D000836 ORTHO05D000709 3.3e-11 73.6 105 45.7
CAN.G771.72 Capsicum annuum HOM05D000836 ORTHO05D000709 4.3e-11 73.2 105 46.7
Migut.D00533 Erythranthe guttata HOM05D000836 ORTHO05D000709 7.4e-11 72.4 105 45.7
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 1.3e-10 71.6 163 33.1
CSS0023634 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 1.6e-10 71.2 105 44.8
CSS0049393 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 1.6e-10 71.2 105 44.8
CAN.G122.3 Capsicum annuum HOM05D000836 ORTHO05D000709 1.6e-10 71.2 105 45.7
Nitab4.5_0006192g0020 Nicotiana tabacum HOM05D000836 ORTHO05D000709 1.6e-10 71.2 106 47.2
Nitab4.5_0000045g0120 Nicotiana tabacum HOM05D000836 ORTHO05D000709 2.1e-10 70.9 106 47.2
Nitab4.5_0012093g0010 Nicotiana tabacum HOM05D000836 ORTHO05D000709 2.1e-10 70.9 105 45.7
Peaxi162Scf00517g00513 Petunia axillaris HOM05D000836 ORTHO05D000709 2.1e-10 70.9 105 45.7
Lalb_Chr01g0010231 Lupinus albus HOM05D000836 ORTHO05D000709 2.8e-10 70.5 100 48.0
Peaxi162Scf00107g00176 Petunia axillaris HOM05D000836 ORTHO05D000709 2.8e-10 70.5 97 48.5
Solyc06g083460.4 Solanum lycopersicum HOM05D000836 ORTHO05D000709 2.8e-10 70.5 106 45.3
Sopen06g034840 Solanum pennellii HOM05D000836 ORTHO05D000709 2.8e-10 70.5 106 45.3
DCAR_012638 Daucus carota HOM05D000836 ORTHO05D000709 3.7e-10 70.1 53 66.0
MD05G1176000 Malus domestica HOM05D000836 ORTHO05D000709 3.7e-10 70.1 99 48.5
VMungo0720G2087 Vigna mungo HOM05D000836 ORTHO05D000709 3.7e-10 70.1 106 46.2
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 4.8e-10 69.7 185 30.3
Phvul.007G244700 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 4.8e-10 69.7 100 48.0
TAR365G0060 Trochodendron aralioides HOM05D000836 ORTHO05D000709 6.2e-10 69.3 105 47.6
MSTRG.17552 Avicennia marina HOM05D000836 ORTHO05D000709 8.1e-10 68.9 105 43.8
Glyma.10G102400 Glycine max HOM05D000836 ORTHO05D000709 8.1e-10 68.9 100 48.0
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 8.1e-10 68.9 167 31.1
Lj1g0022487 Lotus japonicus HOM05D000836 ORTHO05D000709 8.1e-10 68.9 108 45.4
MBI07_g31313_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 8.1e-10 68.9 145 36.6
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 8.1e-10 68.9 179 34.6
Glyma.02G164700 Glycine max HOM05D000836 ORTHO05D000709 1.1e-09 68.6 100 47.0
MD10G1165100 Malus domestica HOM05D000836 ORTHO05D000709 1.1e-09 68.6 99 47.5
CSS0005490 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 1.4e-09 68.2 105 42.9
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.4e-09 68.2 167 30.5
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 1.4e-09 68.2 167 30.5
Oeu022256.1 Olea europaea HOM05D000836 ORTHO05D000709 1.4e-09 68.2 105 42.9
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 1.4e-09 68.2 170 32.4
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 1.4e-09 68.2 190 30.0
ATR0736G039 Amborella trichopoda HOM05D000836 ORTHO05D000709 1.8e-09 67.8 99 46.5
Migut.N02267 Erythranthe guttata HOM05D000836 ORTHO05D000709 2.4e-09 67.4 101 45.5
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 2.4e-09 67.4 188 30.9
SGA_v2.0_scaffold8G04645 Striga asiatica HOM05D000836 ORTHO05D000709 2.4e-09 67.4 106 45.3
ECA248G0109 Erigeron canadensis HOM05D000836 ORTHO05D000709 3.1e-09 67.0 265 28.7
Migut.N02268 Erythranthe guttata HOM05D000836 ORTHO05D000709 3.1e-09 67.0 100 45.0
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 3.1e-09 67.0 175 32.0
Lalb_Chr03g0036201 Lupinus albus HOM05D000836 ORTHO05D000709 4.0e-09 66.6 106 45.3
Duzib151G0556 Durio zibethinus HOM05D000836 ORTHO05D000709 5.3e-09 66.2 106 45.3
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 5.3e-09 66.2 153 31.4
CDE08G0329 Ceratophyllum demersum HOM05D000836 ORTHO05D000709 6.9e-09 65.9 99 45.5
Haze_11597 Corylus avellana HOM05D000836 ORTHO05D000709 6.9e-09 65.9 169 33.1
Eucgr.H00067 Eucalyptus grandis HOM05D000836 ORTHO05D000709 6.9e-09 65.9 99 43.4
Nn1g07846 Nelumbo nucifera HOM05D000836 ORTHO05D000709 6.9e-09 65.9 107 44.9
MSTRG.21421 Avicennia marina HOM05D000836 ORTHO05D000709 9.0e-09 65.5 106 44.3
HanXRQChr00c0028g0571141 Helianthus annuus HOM05D000836 ORTHO05D000709 9.0e-09 65.5 105 44.8
Nn3g19956 Nelumbo nucifera HOM05D000836 ORTHO05D000709 1.2e-08 65.1 105 41.9
TPR.G7604 Trifolium pratense HOM05D000836 ORTHO05D000709 1.2e-08 65.1 106 43.4
TAR636G0232 Trochodendron aralioides HOM05D000836 ORTHO05D000709 1.2e-08 65.1 106 43.4
CiPaw.01G122500 Carya illinoinensis HOM05D000836 ORTHO05D000709 2.6e-08 63.9 106 42.5
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 2.6e-08 63.9 183 33.3
Thecc.04G205800 Theobroma cacao HOM05D000836 ORTHO05D000709 2.6e-08 63.9 106 43.4
arahy.Tifrunner.gnm1.ann1.050HUA Arachis hypogaea HOM05D000836 ORTHO05D000709 3.4e-08 63.5 113 44.2
AUR62008907 Chenopodium quinoa HOM05D000836 ORTHO05D000709 3.4e-08 63.5 105 42.9
Medtr1g050340 Medicago truncatula HOM05D000836 ORTHO05D000709 3.4e-08 63.5 100 45.0
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 4.5e-08 63.2 106 42.5
Ca_29744_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 4.5e-08 63.2 106 42.5
Gohir.D10G142600 Gossypium hirsutum HOM05D000836 ORTHO05D000709 7.6e-08 62.4 106 42.5
Gorai.011G159400 Gossypium raimondii HOM05D000836 ORTHO05D000709 7.6e-08 62.4 106 42.5
RcHm_v2.0_Chr6g0284941 Rosa chinensis HOM05D000836 ORTHO05D000709 7.6e-08 62.4 99 48.5
CDE02G2853 Ceratophyllum demersum HOM05D000836 ORTHO05D000709 9.9e-08 62.0 99 43.4
ECA247G1726 Erigeron canadensis HOM05D000836 ORTHO05D000709 9.9e-08 62.0 201 31.8
arahy.Tifrunner.gnm1.ann1.HW9H1V Arachis hypogaea HOM05D000836 ORTHO05D000709 1.3e-07 61.6 113 43.4
FvH4_2g19160 Fragaria vesca HOM05D000836 ORTHO05D000709 1.3e-07 61.6 99 45.5
FAN15G3190 Fragaria x ananassa HOM05D000836 ORTHO05D000709 1.3e-07 61.6 99 45.5
FAN24G1148 Fragaria x ananassa HOM05D000836 ORTHO05D000709 1.3e-07 61.6 99 45.5
FAN27G2627 Fragaria x ananassa HOM05D000836 ORTHO05D000709 1.3e-07 61.6 99 45.5
Lsat_1_v5_gn_5_179300 Lactuca sativa HOM05D000836 ORTHO05D000709 1.7e-07 61.2 105 42.9
Prupe.8G203500 Prunus persica HOM05D000836 ORTHO05D000709 1.7e-07 61.2 99 44.4
Potri.001G049400 Populus trichocarpa HOM05D000836 ORTHO05D000709 2.2e-07 60.8 106 40.6
TWI73G0286 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 2.2e-07 60.8 106 41.5
Ah.08g214240 Amaranthus hybridus HOM05D000836 ORTHO05D000709 2.9e-07 60.5 105 41.9
Psat3g144760 Pisum sativum HOM05D000836 ORTHO05D000709 2.9e-07 60.5 112 42.0
Sed0006740 Sechium edule HOM05D000836 ORTHO05D000709 3.8e-07 60.1 106 37.7
EL10Ac7g17827 Beta vulgaris HOM05D000836 ORTHO05D000709 4.9e-07 59.7 111 42.3
Gohir.D02G123100 Gossypium hirsutum HOM05D000836 ORTHO05D000709 4.9e-07 59.7 106 40.6
Sc17g0002340 Simmondsia chinensis HOM05D000836 ORTHO05D000709 4.9e-07 59.7 105 41.9
Sc17g0002390 Simmondsia chinensis HOM05D000836 ORTHO05D000709 4.9e-07 59.7 105 41.9
CiPaw.03G150200 Carya illinoinensis HOM05D000836 ORTHO05D000709 6.4e-07 59.3 99 42.4
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 6.4e-07 59.3 162 32.1
COL.COLO4_10279 Corchorus olitorius HOM05D000836 ORTHO05D000709 8.4e-07 58.9 106 39.6
Lalb_Chr12g0209701 Lupinus albus HOM05D000836 ORTHO05D000709 8.4e-07 58.9 99 44.4
PGR142G1073 Punica granatum HOM05D000836 ORTHO05D000709 1.1e-06 58.5 106 40.6
Sabra03G0130900 Salix brachista HOM05D000836 ORTHO05D000709 1.1e-06 58.5 97 43.3
Ciclev10004358m.g Citrus clementina HOM05D000836 ORTHO05D000709 1.4e-06 58.2 106 39.6
Potri.003G178600 Populus trichocarpa HOM05D000836 ORTHO05D000709 1.4e-06 58.2 104 40.4
Duzib268G1331 Durio zibethinus HOM05D000836 ORTHO05D000709 1.9e-06 57.8 106 41.5
Lj1g0001170 Lotus japonicus HOM05D000836 ORTHO05D000709 1.9e-06 57.8 116 41.4
Aa31LG5G4350 Aethionema arabicum HOM05D000836 ORTHO05D000709 2.5e-06 57.4 106 39.6
Duzib138G1320 Durio zibethinus HOM05D000836 ORTHO05D000709 2.5e-06 57.4 96 41.7
Gohir.A03G093900 Gossypium hirsutum HOM05D000836 ORTHO05D000709 2.5e-06 57.4 106 39.6
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 2.5e-06 57.4 122 32.8
GSVIVG01028646001 Vitis vinifera HOM05D000836 ORTHO05D000709 2.5e-06 57.4 99 45.5
Atru.chr4.1725 Acer truncatum HOM05D000836 ORTHO05D000709 3.2e-06 57.0 106 39.6
Gorai.005G131200 Gossypium raimondii HOM05D000836 ORTHO05D000709 4.2e-06 56.6 202 28.7
HPP92_014749 Vanilla planifolia HOM05D000836 ORTHO05D000709 4.2e-06 56.6 106 39.6
CANSAT78G1202 Cannabis sativa HOM05D000836 ORTHO05D000709 5.5e-06 56.2 106 40.6
Cpa.g.sc494.1 Carica papaya HOM05D000836 ORTHO05D000709 7.1e-06 55.8 97 42.3
Manes.13G045500 Manihot esculenta HOM05D000836 ORTHO05D000709 7.1e-06 55.8 106 37.7
Medtr7g058440 Medicago truncatula HOM05D000836 ORTHO05D000709 7.1e-06 55.8 101 41.6
QL09p054646 Quercus lobata HOM05D000836 ORTHO05D000709 7.1e-06 55.8 99 41.4
CiPaw.02G067000 Carya illinoinensis HOM05D000836 ORTHO05D000709 9.3e-06 55.5 106 39.6
Ca_07519_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 9.3e-06 55.5 112 39.3
Thhalv10016303m.g Eutrema salsugineum HOM05D000836 ORTHO05D000709 9.3e-06 55.5 105 40.0
Psat7g131440 Pisum sativum HOM05D000836 ORTHO05D000709 9.3e-06 55.5 106 41.5
THA.LOC104801044 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 9.3e-06 55.5 100 41.0
TPR.G9030 Trifolium pratense HOM05D000836 ORTHO05D000709 9.3e-06 55.5 112 38.4


User provided reference genes

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