Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016050 Daucus carota HOM05D000210 ORTHO05D176647 1.8e-81 305.8 154 100.0
MELO3C006046.2 Cucumis melo HOM05D000210 ORTHO05D001446 3.2e-09 65.9 60 58.3
DCAR_006967 Daucus carota HOM05D000210 ORTHO05D001446 9.3e-09 64.3 34 88.2
Peaxi162Scf00141g01331 Petunia axillaris HOM05D000210 ORTHO05D001446 3.5e-08 62.4 49 59.2
PGR042G0675 Punica granatum HOM05D000210 ORTHO05D001446 3.0e-07 59.3 34 79.4
CSS0049225 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 3.9e-07 58.9 57 54.4
Haze_15627 Corylus avellana HOM05D000210 ORTHO05D001446 3.9e-07 58.9 34 73.5
SalBow3G3256 Salvia bowleyana HOM05D000210 ORTHO05D001446 5.1e-07 58.5 34 79.4
Nitab4.5_0007594g0020 Nicotiana tabacum HOM05D000210 ORTHO05D001446 6.7e-07 58.2 34 79.4
PGSC0003DMG400019881 Solanum tuberosum HOM05D000210 ORTHO05D001446 6.7e-07 58.2 34 79.4
Nitab4.5_0001084g0010 Nicotiana tabacum HOM05D000210 ORTHO05D001446 8.7e-07 57.8 34 79.4
TAR629G2060 Trochodendron aralioides HOM05D000210 ORTHO05D001446 8.7e-07 57.8 68 48.5
Aqoxy7G00150 Aquilegia oxysepala HOM05D000210 ORTHO05D001446 1.1e-06 57.4 34 76.5
CSS0006629 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
CSS0026777 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
CSS0032243 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
CSS0048352 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
CAN.G818.8 Capsicum annuum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
CiPaw.02G039000 Carya illinoinensis HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
MD07G1145900 Malus domestica HOM05D000210 ORTHO05D001446 1.5e-06 57.0 68 45.6
Nn3g19075 Nelumbo nucifera HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Nitab4.5_0000522g0170 Nicotiana tabacum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Nitab4.5_0000522g0190 Nicotiana tabacum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Nitab4.5_0001084g0020 Nicotiana tabacum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Peaxi162Scf00218g00029 Petunia axillaris HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
PGR031G3504 Punica granatum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Rhsim07G0006200 Rhododendron simsii HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Solyc00g500216.1 Solanum lycopersicum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Solyc10g011650.3 Solanum lycopersicum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Solyc10g011660.3 Solanum lycopersicum HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Sopen10g005450 Solanum pennellii HOM05D000210 ORTHO05D001446 1.5e-06 57.0 34 76.5
Cpa.g.sc1483.1 Carica papaya HOM05D000210 ORTHO05D001446 1.9e-06 56.6 34 73.5
Eucgr.E00072 Eucalyptus grandis HOM05D000210 ORTHO05D001446 1.9e-06 56.6 34 76.5
Nitab4.5_0000305g0060 Nicotiana tabacum HOM05D000210 ORTHO05D001446 1.9e-06 56.6 34 73.5
CSS0007780 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 2.5e-06 56.2 68 47.1
Cfa003829 Carpinus fangiana HOM05D000210 ORTHO05D001446 2.5e-06 56.2 34 73.5
Migut.B01840 Erythranthe guttata HOM05D000210 ORTHO05D001446 2.5e-06 56.2 34 76.5
Peaxi162Scf01012g00020 Petunia axillaris HOM05D000210 ORTHO05D001446 2.5e-06 56.2 34 73.5
TAR375G0568 Trochodendron aralioides HOM05D000210 ORTHO05D001446 2.5e-06 56.2 34 73.5
MSTRG.17324 Avicennia marina HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 76.5
MSTRG.28246 Avicennia marina HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 76.5
FvH4_7g16040 Fragaria vesca HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
FAN01G3040 Fragaria x ananassa HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
FAN03G2950 Fragaria x ananassa HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
FAN06G3587 Fragaria x ananassa HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
FAN06G5070 Fragaria x ananassa HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
FAN10G0135 Fragaria x ananassa HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
FAN10G2885 Fragaria x ananassa HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
RcHm_v2.0_Chr1g0358981 Rosa chinensis HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
SGA_v2.0_scaffold43G16379 Striga asiatica HOM05D000210 ORTHO05D001446 4.3e-06 55.5 34 73.5
Atru.chr5.627 Acer truncatum HOM05D000210 ORTHO05D001446 5.6e-06 55.1 34 70.6
EL10Ac1g00308 Beta vulgaris HOM05D000210 ORTHO05D001446 5.6e-06 55.1 54 50.0
Eucgr.D02349 Eucalyptus grandis HOM05D000210 ORTHO05D001446 5.6e-06 55.1 34 76.5
Sed0021134 Sechium edule HOM05D000210 ORTHO05D001446 5.6e-06 55.1 34 76.5
Actinidia10109 Actinidia chinensis HOM05D000210 ORTHO05D019472 7.4e-06 54.7 34 73.5
CiPaw.01G073200 Carya illinoinensis HOM05D000210 ORTHO05D001446 7.4e-06 54.7 34 73.5
Hma1.2p1_0384F.1_g141130 Hydrangea macrophylla HOM05D000210 ORTHO05D001446 7.4e-06 54.7 34 73.5
Lj9A591T86 Lonicera japonica HOM05D000210 ORTHO05D001446 7.4e-06 54.7 36 69.4
vmacro13181 Vaccinium macrocarpon HOM05D000210 ORTHO05D001446 7.4e-06 54.7 34 70.6
arahy.Tifrunner.gnm1.ann1.118RMI Arachis hypogaea HOM05D000210 ORTHO05D001446 9.6e-06 54.3 34 76.5
arahy.Tifrunner.gnm1.ann1.5C6TR6 Arachis hypogaea HOM05D000210 ORTHO05D001446 9.6e-06 54.3 34 76.5
CSS0040275 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 9.6e-06 54.3 68 47.1
ClCG05G000980 Citrullus lanatus HOM05D000210 ORTHO05D001446 9.6e-06 54.3 68 48.5
Nn1g01814 Nelumbo nucifera HOM05D000210 ORTHO05D001446 9.6e-06 54.3 34 70.6
Oeu017443.1 Olea europaea HOM05D000210 ORTHO05D001446 9.6e-06 54.3 34 70.6
unitig_736.g22816 Utricularia gibba HOM05D000210 ORTHO05D001446 9.6e-06 54.3 34 73.5


User provided reference genes

Program Settings