Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016030 Daucus carota HOM05D003805 ORTHO05D004300 1.1e-63 246.5 126 100.0
CSS0002171 Camellia sinensis var. sinensis HOM05D003805 ORTHO05D004300 5.8e-25 117.9 133 55.6
Oeu035340.1 Olea europaea HOM05D003805 ORTHO05D004300 3.8e-24 115.2 132 53.8
GSVIVG01018926001 Vitis vinifera HOM05D003805 ORTHO05D004300 1.1e-23 113.6 129 50.4
Duzib264G0487 Durio zibethinus HOM05D003805 ORTHO05D004300 5.4e-23 111.3 135 48.1
Hma1.2p1_1297F.1_g274110 Hydrangea macrophylla HOM05D003805 ORTHO05D004300 1.6e-22 109.8 131 51.9
Gorai.007G201700 Gossypium raimondii HOM05D003805 ORTHO05D004300 2.1e-22 109.4 133 48.1
Cpa.g.sc6.148 Carica papaya HOM05D003805 ORTHO05D004300 2.7e-22 109.0 138 48.6
Thecc.01G031800 Theobroma cacao HOM05D003805 ORTHO05D004300 3.5e-22 108.6 136 49.3
Haze_15065 Corylus avellana HOM05D000625 ORTHO05D010258 4.6e-22 108.2 127 49.6
Lsat_1_v5_gn_2_77300 Lactuca sativa HOM05D003805 ORTHO05D004300 6.0e-22 107.8 129 48.8
Gohir.A11G183100 Gossypium hirsutum HOM05D003805 ORTHO05D004300 2.3e-21 105.9 129 48.1
Gohir.D11G189500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 2.3e-21 105.9 131 47.3
QL06p047086 Quercus lobata HOM05D003805 ORTHO05D004300 1.1e-20 103.6 130 49.2
Gohir.D12G063500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 1.5e-20 103.2 136 47.1
Gorai.008G066800 Gossypium raimondii HOM05D003805 ORTHO05D004300 1.5e-20 103.2 136 47.1
PGR119G0937 Punica granatum HOM05D003805 ORTHO05D004300 2.5e-20 102.4 133 48.1
Sed0008243 Sechium edule HOM05D003805 ORTHO05D004300 5.6e-20 101.3 129 47.3
Duzib147G0407 Durio zibethinus HOM05D003805 ORTHO05D004300 9.6e-20 100.5 134 48.5
Gohir.A12G063700 Gossypium hirsutum HOM05D003805 ORTHO05D004300 1.3e-19 100.1 136 46.3
HanXRQChr07g0191651 Helianthus annuus HOM05D003805 ORTHO05D004300 1.3e-19 100.1 126 48.4
TWI09G1369 Tripterygium wilfordii HOM05D003805 ORTHO05D004300 2.8e-19 99.0 131 45.8
Sed0017680 Sechium edule HOM05D003805 ORTHO05D004300 8.1e-19 97.4 129 46.5
Actinidia19196 Actinidia chinensis HOM05D002962 ORTHO05D003280 2.4e-18 95.9 114 54.4
HanXRQChr14g0440581 Helianthus annuus HOM05D003805 ORTHO05D004300 4.0e-18 95.1 129 45.7
SalBow8G4897 Salvia bowleyana HOM05D003805 ORTHO05D004300 4.0e-18 95.1 126 47.6
ECA238G4264 Erigeron canadensis HOM05D003805 ORTHO05D004300 1.2e-17 93.6 130 45.4
Lsat_1_v5_gn_2_77320 Lactuca sativa HOM05D003805 ORTHO05D004300 1.2e-17 93.6 130 46.2
PGSC0003DMG400003519 Solanum tuberosum HOM05D003805 ORTHO05D004300 1.5e-17 93.2 120 49.2
COL.COLO4_22043 Corchorus olitorius HOM05D003805 ORTHO05D004300 2.0e-17 92.8 135 43.0
THA.LOC104819775 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 2.6e-17 92.4 137 47.4
Aa31LG6G13290 Aethionema arabicum HOM05D003805 ORTHO05D004300 3.4e-17 92.0 137 43.8
BcaB01g00567 Brassica carinata HOM05D003805 ORTHO05D004300 7.6e-17 90.9 135 41.5
THA.LOC104807465 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 9.9e-17 90.5 131 45.0
CAN.G358.54 Capsicum annuum HOM05D003805 ORTHO05D004300 2.2e-16 89.4 120 49.2
Nitab4.5_0000178g0280 Nicotiana tabacum HOM05D003805 ORTHO05D004300 2.2e-16 89.4 124 44.4
Potri.007G022300 Populus trichocarpa HOM05D003805 ORTHO05D004300 2.9e-16 89.0 118 49.2
Carub.0007s0382 Capsella rubella HOM05D003805 ORTHO05D004300 3.8e-16 88.6 135 42.2
MELO3C007840.2 Cucumis melo HOM05D003805 ORTHO05D004300 3.8e-16 88.6 129 44.2
Thhalv10010834m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 6.4e-16 87.8 138 41.3
Lj4g0009905 Lotus japonicus HOM05D003805 ORTHO05D004300 6.4e-16 87.8 127 40.2
Sabra07G0019500 Salix brachista HOM05D003805 ORTHO05D004300 6.4e-16 87.8 118 47.5
AL7G14560 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 8.4e-16 87.4 134 42.5
BcaB03g12394 Brassica carinata HOM05D003805 ORTHO05D004300 8.4e-16 87.4 135 42.2
Carub.0003s3236 Capsella rubella HOM05D003805 ORTHO05D004300 8.4e-16 87.4 133 42.1
AL3G51440 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 1.1e-15 87.0 130 40.8
BcaC07g39558 Brassica carinata HOM05D003805 ORTHO05D004300 1.1e-15 87.0 136 40.4
C08p26110 Brassica napus HOM05D003805 ORTHO05D004300 1.1e-15 87.0 136 40.4
BolC8t50229H Brassica oleracea HOM05D003805 ORTHO05D004300 1.1e-15 87.0 136 40.4
Lj4g0007128 Lotus japonicus HOM05D003805 ORTHO05D004300 1.1e-15 87.0 127 39.4
AT4G36500 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 1.4e-15 86.7 134 42.5
ECA238G1778 Erigeron canadensis HOM05D003805 ORTHO05D004300 2.4e-15 85.9 123 48.0
Nitab4.5_0012261g0010 Nicotiana tabacum HOM05D003805 ORTHO05D004300 2.4e-15 85.9 119 45.4
Lalb_Chr16g0391061 Lupinus albus HOM05D003805 ORTHO05D004300 3.2e-15 85.5 127 40.2
Aa31LG4G19000 Aethionema arabicum HOM05D003805 ORTHO05D004300 4.2e-15 85.1 137 41.6
AT3G50900 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 5.4e-15 84.7 138 39.9
Glyma.11G071100 Glycine max HOM05D003805 ORTHO05D004300 5.4e-15 84.7 136 40.4
AL5G31260 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 7.1e-15 84.3 135 40.0
BraA08t34177Z Brassica rapa HOM05D003805 ORTHO05D004300 7.1e-15 84.3 135 41.5
Oeu025181.1 Olea europaea HOM05D003805 ORTHO05D004300 7.1e-15 84.3 119 48.7
TPR.G24112 Trifolium pratense HOM05D003805 ORTHO05D004300 7.1e-15 84.3 118 41.5
A08p22170 Brassica napus HOM05D003805 ORTHO05D004300 9.3e-15 84.0 135 40.7
C07p61730 Brassica napus HOM05D003805 ORTHO05D004300 9.3e-15 84.0 135 40.0
BolC7t46598H Brassica oleracea HOM05D003805 ORTHO05D004300 9.3e-15 84.0 135 40.0
CARHR160470 Cardamine hirsuta HOM05D003805 ORTHO05D004300 9.3e-15 84.0 135 38.5
Glyma.01G172100 Glycine max HOM05D003805 ORTHO05D004300 9.3e-15 84.0 135 40.0
Glyma.02G055000 Glycine max HOM05D003805 ORTHO05D004300 9.3e-15 84.0 127 40.2
Ah.03g141100 Amaranthus hybridus HOM05D003805 ORTHO05D004300 1.2e-14 83.6 139 39.6
Thhalv10026576m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 1.2e-14 83.6 135 40.7
Manes.01G137700 Manihot esculenta HOM05D003805 ORTHO05D004300 1.2e-14 83.6 138 44.2
CARHR244820 Cardamine hirsuta HOM05D003805 ORTHO05D004300 1.6e-14 83.2 135 40.0
Lj4g0028115 Lotus japonicus HOM05D003805 ORTHO05D004300 1.6e-14 83.2 127 37.8
Sp7g34150 Schrenkiella parvula HOM05D003805 ORTHO05D004300 1.6e-14 83.2 135 40.7
Sc16g0002610 Simmondsia chinensis HOM05D003805 ORTHO05D004300 1.6e-14 83.2 135 45.9
A01p02360 Brassica napus HOM05D003805 ORTHO05D004300 2.1e-14 82.8 136 41.2
C01p02570 Brassica napus HOM05D003805 ORTHO05D004300 2.1e-14 82.8 136 41.2
CsaV3_6G046430 Cucumis sativus L. HOM05D003805 ORTHO05D004300 2.1e-14 82.8 124 44.4
Lalb_Chr09g0322201 Lupinus albus HOM05D003805 ORTHO05D004300 2.1e-14 82.8 129 41.9
SGA_v2.0_scaffold12G06299 Striga asiatica HOM05D003805 ORTHO05D004300 2.1e-14 82.8 115 44.3
AT2G18210 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 2.7e-14 82.4 134 41.8
A01p23830 Brassica napus HOM05D003805 ORTHO05D004300 2.7e-14 82.4 137 39.4
A03p64280 Brassica napus HOM05D003805 ORTHO05D004300 2.7e-14 82.4 135 40.0
BraA01t02291Z Brassica rapa HOM05D003805 ORTHO05D004300 2.7e-14 82.4 137 39.4
BraA03t15498Z Brassica rapa HOM05D003805 ORTHO05D004300 2.7e-14 82.4 135 40.0
Carub.0003s3237 Capsella rubella HOM05D003805 ORTHO05D004300 2.7e-14 82.4 130 39.2
BcaC01g00464 Brassica carinata HOM05D003805 ORTHO05D004300 3.5e-14 82.0 135 40.7
A03p48010 Brassica napus HOM05D003805 ORTHO05D004300 3.5e-14 82.0 134 38.1
C03p80150 Brassica napus HOM05D003805 ORTHO05D004300 3.5e-14 82.0 135 40.7
BolC3t20271H Brassica oleracea HOM05D003805 ORTHO05D004300 3.5e-14 82.0 135 40.7
Lj2g0025508 Lotus japonicus HOM05D003805 ORTHO05D004300 3.5e-14 82.0 130 41.5
Nitab4.5_0000178g0350 Nicotiana tabacum HOM05D003805 ORTHO05D004300 3.5e-14 82.0 125 44.0
Peaxi162Scf00366g00711 Petunia axillaris HOM05D003805 ORTHO05D004300 3.5e-14 82.0 123 44.7
Phvul.002G032400 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 3.5e-14 82.0 129 43.4
Carub.0005s1729 Capsella rubella HOM05D003805 ORTHO05D004300 4.6e-14 81.6 141 38.3
VMungo1215G0776 Vigna mungo HOM05D003805 ORTHO05D004300 4.6e-14 81.6 136 39.0
BolC1t00245H Brassica oleracea HOM05D003805 ORTHO05D004300 6.0e-14 81.3 136 40.4
BcaB05g23252 Brassica carinata HOM05D003805 ORTHO05D004300 7.9e-14 80.9 138 39.1
BraA01t00224Z Brassica rapa HOM05D003805 ORTHO05D004300 7.9e-14 80.9 135 40.7
BcaNung00728 Brassica carinata HOM05D003805 ORTHO05D004300 1.0e-13 80.5 136 40.4
A01p02370 Brassica napus HOM05D003805 ORTHO05D004300 1.0e-13 80.5 132 40.2
BraA01t00225Z Brassica rapa HOM05D003805 ORTHO05D004300 1.0e-13 80.5 132 40.2
Thhalv10023197m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 1.0e-13 80.5 129 39.5
Solyc02g085005.1 Solanum lycopersicum HOM05D003805 ORTHO05D004300 1.0e-13 80.5 120 45.8
Sopen02g029690 Solanum pennellii HOM05D003805 ORTHO05D004300 1.0e-13 80.5 120 45.0
TPR.G24102 Trifolium pratense HOM05D003805 ORTHO05D004300 1.0e-13 80.5 132 38.6
Sp7g34160 Schrenkiella parvula HOM05D003805 ORTHO05D004300 1.3e-13 80.1 136 39.7
BcaNung05312 Brassica carinata HOM05D003805 ORTHO05D004300 1.7e-13 79.7 135 38.5
Manes.02G096100 Manihot esculenta HOM05D003805 ORTHO05D004300 1.7e-13 79.7 130 42.3
Medtr8g077145 Medicago truncatula HOM05D003805 ORTHO05D004300 1.7e-13 79.7 132 36.4
BcaNung05311 Brassica carinata HOM05D003805 ORTHO05D004300 2.3e-13 79.3 132 38.6
BolC7t45120H Brassica oleracea HOM05D003805 ORTHO05D004300 2.3e-13 79.3 138 37.7
Phvul.003G255400 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 2.3e-13 79.3 127 40.9
Psat2g157880 Pisum sativum HOM05D003805 ORTHO05D004300 2.3e-13 79.3 135 38.5
BcaNung00729 Brassica carinata HOM05D003805 ORTHO05D004300 3.0e-13 79.0 132 38.6
C01p02580 Brassica napus HOM05D003805 ORTHO05D004300 3.0e-13 79.0 132 38.6
BolC1t00246H Brassica oleracea HOM05D003805 ORTHO05D004300 3.0e-13 79.0 132 38.6
Ca_22293_v3 Cicer arietinum L. HOM05D003805 ORTHO05D004300 3.0e-13 79.0 136 38.2
Glyma.02G054900 Glycine max HOM05D003805 ORTHO05D004300 3.9e-13 78.6 128 39.1
VMungo0251G0164 Vigna mungo HOM05D003805 ORTHO05D004300 3.9e-13 78.6 127 37.8
C07p46020 Brassica napus HOM05D003805 ORTHO05D004300 5.1e-13 78.2 131 38.9
Sp1g22390 Schrenkiella parvula HOM05D003805 ORTHO05D004300 5.1e-13 78.2 135 41.5
A09p44010 Brassica napus HOM05D003805 ORTHO05D004300 6.6e-13 77.8 130 39.2
BraA09t39859Z Brassica rapa HOM05D003805 ORTHO05D004300 6.6e-13 77.8 130 39.2
Lalb_Chr09g0333461 Lupinus albus HOM05D003805 ORTHO05D004300 6.6e-13 77.8 124 37.1
Nitab4.5_0007490g0050 Nicotiana tabacum HOM05D003805 ORTHO05D004300 6.6e-13 77.8 122 44.3
Sc03g0003120 Simmondsia chinensis HOM05D003805 ORTHO05D004300 6.6e-13 77.8 142 39.4
Psat4g094680 Pisum sativum HOM05D003805 ORTHO05D004300 8.7e-13 77.4 118 39.8
Psat4g094760 Pisum sativum HOM05D003805 ORTHO05D004300 1.1e-12 77.0 118 39.0
Psat4g094720 Pisum sativum HOM05D003805 ORTHO05D004300 1.5e-12 76.6 118 39.8
VMungo0251G1302 Vigna mungo HOM05D003805 ORTHO05D004300 1.9e-12 76.3 127 38.6
Medtr5g020860 Medicago truncatula HOM05D003805 ORTHO05D004300 3.3e-12 75.5 68 51.5
Phvul.003G255300 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 3.3e-12 75.5 127 38.6
Glyma.16G135600 Glycine max HOM05D003805 ORTHO05D004300 4.3e-12 75.1 125 40.0
Peaxi162Scf00366g00066 Petunia axillaris HOM05D003805 ORTHO05D004300 5.6e-12 74.7 122 43.4
arahy.Tifrunner.gnm1.ann1.IAMR94 Arachis hypogaea HOM05D003805 ORTHO05D004300 7.4e-12 74.3 130 40.0
BraA03t13909Z Brassica rapa HOM05D003805 ORTHO05D004300 7.4e-12 74.3 150 36.0
Dinv40009 Davidia involucrata HOM05D002962 ORTHO05D004300 9.6e-12 73.9 118 47.5
Nn5g29663 Nelumbo nucifera HOM05D003805 ORTHO05D004300 1.3e-11 73.6 117 41.0
Peaxi162Scf00366g00073 Petunia axillaris HOM05D003805 ORTHO05D004300 2.1e-11 72.8 116 44.8
Solyc02g085010.1 Solanum lycopersicum HOM05D003805 ORTHO05D004300 2.1e-11 72.8 127 44.1
SGA_v2.0_scaffold51G18830 Striga asiatica HOM05D003805 ORTHO05D004300 2.8e-11 72.4 117 41.9
unitig_0.g473 Utricularia gibba HOM05D003805 ORTHO05D004300 4.8e-11 71.6 133 39.1
Glyma.16G135400 Glycine max HOM05D003805 ORTHO05D004300 6.2e-11 71.2 66 48.5
CARHR281260 Cardamine hirsuta HOM05D003805 ORTHO05D004300 1.4e-10 70.1 133 39.1
Lsat_1_v5_gn_2_77360 Lactuca sativa HOM05D003805 ORTHO05D004300 1.4e-10 70.1 115 40.9
Lsat_1_v5_gn_8_64500 Lactuca sativa HOM05D003805 ORTHO05D004300 1.4e-10 70.1 56 58.9
TPR.G2362 Trifolium pratense HOM05D003805 ORTHO05D004300 1.4e-10 70.1 66 47.0
Migut.H02530 Erythranthe guttata HOM05D003805 ORTHO05D004300 1.8e-10 69.7 134 42.5
THA.LOC104826691 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 1.8e-10 69.7 142 35.2
Sp2g30240 Schrenkiella parvula HOM05D003805 ORTHO05D004300 2.4e-10 69.3 139 38.1
Sopen02g029700 Solanum pennellii HOM05D003805 ORTHO05D004300 3.1e-10 68.9 127 42.5
PGSC0003DMG400003518 Solanum tuberosum HOM05D003805 ORTHO05D004300 5.3e-10 68.2 91 47.3
BcaB02g10024 Brassica carinata HOM05D003805 ORTHO05D004300 6.9e-10 67.8 132 37.9
PGSC0003DMG401003517 Solanum tuberosum HOM05D003805 ORTHO05D004300 9.0e-10 67.4 120 41.7
AT5G66490 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 2.0e-09 66.2 136 39.7
Atru.chr3.624 Acer truncatum HOM05D003805 ORTHO05D004300 2.6e-09 65.9 92 45.7
Aqoxy6G01157 Aquilegia oxysepala HOM05D003805 ORTHO05D004300 2.6e-09 65.9 127 39.4
AUR62004083 Chenopodium quinoa HOM05D000625 ORTHO05D000467 2.6e-09 65.9 103 43.7
A07p17480 Brassica napus HOM05D000001 ORTHO05D010258 7.6e-09 64.3 136 37.5
BcaC06g33070 Brassica carinata HOM05D003805 ORTHO05D004300 1.3e-08 63.5 39 69.2
AL8G45040 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 1.7e-08 63.2 135 39.3
TAR247G0001 Trochodendron aralioides HOM05D003805 ORTHO05D004300 1.7e-08 63.2 104 34.6
PGSC0003DMG402003517 Solanum tuberosum HOM05D003805 ORTHO05D004300 2.2e-08 62.8 114 37.7
Thhalv10005334m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 3.8e-08 62.0 139 33.8
Aa31LG1G15010 Aethionema arabicum HOM05D003805 ORTHO05D004300 6.4e-08 61.2 133 33.8
BcaC06g34708 Brassica carinata HOM05D003805 ORTHO05D004300 1.1e-07 60.5 134 35.1
C07p25410 Brassica napus HOM05D000001 ORTHO05D010258 1.1e-07 60.5 134 35.1
BolC7t43064H Brassica oleracea HOM05D000001 ORTHO05D010258 1.1e-07 60.5 134 35.1
BcaC06g33329 Brassica carinata HOM05D003805 ORTHO05D004300 1.9e-07 59.7 142 31.7
Sabra07G0019300 Salix brachista HOM05D003805 ORTHO05D004300 1.9e-07 59.7 117 41.9
Potri.007G022200 Populus trichocarpa HOM05D003805 ORTHO05D004300 2.4e-07 59.3 118 40.7
BraA07t29468Z Brassica rapa HOM05D000001 ORTHO05D010258 5.5e-07 58.2 137 35.0
Nn1g04930 Nelumbo nucifera HOM05D003805 ORTHO05D004300 1.2e-06 57.0 107 35.5
Aa31LG8G15780 Aethionema arabicum HOM05D003805 ORTHO05D004300 1.6e-06 56.6 38 57.9
BcaC06g33330 Brassica carinata HOM05D003805 ORTHO05D004300 1.6e-06 56.6 168 28.6
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 3.5e-06 55.5 74 40.5
Lalb_Chr05g0212681 Lupinus albus HOM05D003805 ORTHO05D004300 4.6e-06 55.1 116 38.8
BcaC09g50052 Brassica carinata HOM05D003805 ORTHO05D004300 6.0e-06 54.7 122 36.1
C01p29550 Brassica napus HOM05D003805 ORTHO05D004300 6.0e-06 54.7 122 36.1
BolC1t02898H Brassica oleracea HOM05D003805 ORTHO05D004300 6.0e-06 54.7 122 36.1


User provided reference genes

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