Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 1.8e-39 165.6 92 100.0
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 1.6e-32 142.5 86 94.2
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 2.3e-15 85.5 91 58.2
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.2e-14 83.2 91 57.1
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 7.5e-14 80.5 91 54.9
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.2e-11 73.2 85 54.1
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.6e-11 72.8 85 54.1
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.7e-11 72.0 90 55.6
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 4.5e-11 71.2 91 51.6
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 7.8e-11 70.5 92 52.2
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.0e-10 70.1 86 50.0
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 1.0e-10 70.1 86 50.0
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 1.7e-10 69.3 86 53.5
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 1.7e-10 69.3 91 50.5
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.7e-10 69.3 92 51.1
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.7e-10 69.3 92 47.8
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.9e-10 68.6 87 50.6
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 2.9e-10 68.6 86 53.5
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.8e-10 68.2 86 50.0
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.8e-10 68.2 86 50.0
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 3.8e-10 68.2 92 48.9
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 6.6e-10 67.4 92 48.9
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 6.6e-10 67.4 86 53.5
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 6.6e-10 67.4 92 48.9
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 1.1e-09 66.6 92 48.9
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 1.5e-09 66.2 92 48.9
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 1.9e-09 65.9 91 50.5
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.9e-09 65.9 91 49.5
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 2.5e-09 65.5 89 51.7
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 3.3e-09 65.1 87 50.6
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 4.3e-09 64.7 94 50.0
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 4.3e-09 64.7 91 49.5
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 4.3e-09 64.7 95 45.3
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 4.3e-09 64.7 85 47.1
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.3e-09 64.7 87 50.6
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 5.6e-09 64.3 91 48.4
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 5.6e-09 64.3 94 46.8
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 7.3e-09 63.9 64 57.8
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 7.3e-09 63.9 87 51.7
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 7.3e-09 63.9 91 48.4
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 9.5e-09 63.5 69 55.1
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 9.5e-09 63.5 91 48.4
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.2e-08 63.2 93 46.2
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 1.2e-08 63.2 53 62.3
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 1.2e-08 63.2 53 62.3
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.6e-08 62.8 80 55.0
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 2.1e-08 62.4 91 46.2
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 2.1e-08 62.4 70 54.3
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.6e-08 61.6 95 44.2
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 4.7e-08 61.2 73 53.4
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 8.0e-08 60.5 92 47.8
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 8.0e-08 60.5 87 48.3
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 8.0e-08 60.5 93 47.3
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 8.0e-08 60.5 92 46.7
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 1.8e-07 59.3 88 50.0
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 3.0e-07 58.5 88 52.3
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 4.0e-07 58.2 91 41.8
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 5.2e-07 57.8 76 50.0
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 6.8e-07 57.4 88 45.5
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 6.8e-07 57.4 93 43.0
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 8.9e-07 57.0 92 45.7
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 1.2e-06 56.6 96 44.8
Aqoxy7G00306 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 1.5e-06 56.2 86 46.5
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 1.5e-06 56.2 89 42.7
Atru.chr5.498 Acer truncatum HOM05D000509 ORTHO05D006393 2.0e-06 55.8 52 57.7
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 3.4e-06 55.1 94 43.6
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 3.4e-06 55.1 90 44.4
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 3.4e-06 55.1 91 45.1
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 5.7e-06 54.3 93 43.0
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 7.5e-06 53.9 93 45.2
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 7.5e-06 53.9 86 47.7
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 9.8e-06 53.5 92 45.7


User provided reference genes

Program Settings