Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015969 Daucus carota HOM05D003942 ORTHO05D004527 5.0e-227 790.8 408 100.0
Dinv32469 Davidia involucrata HOM05D003942 ORTHO05D004527 4.9e-158 561.6 415 71.3
CSS0049620 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 2.8e-153 545.8 416 70.7
TAR629G1832 Trochodendron aralioides HOM05D003942 ORTHO05D004527 8.1e-153 544.3 413 69.5
CSS0041241 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 1.1e-152 543.9 416 70.4
Gorai.007G098800 Gossypium raimondii HOM05D003942 ORTHO05D004527 7.6e-151 537.7 414 70.8
Gohir.A11G088200 Gossypium hirsutum HOM05D003942 ORTHO05D004527 2.2e-150 536.2 414 70.5
Thecc.01G360500 Theobroma cacao HOM05D003942 ORTHO05D004527 3.8e-150 535.4 417 68.6
Duzib133G0298 Durio zibethinus HOM05D003942 ORTHO05D004527 1.4e-149 533.5 403 69.5
Actinidia10022 Actinidia chinensis HOM05D003942 ORTHO05D004527 5.4e-149 531.6 402 69.7
Peaxi162Scf00191g01422 Petunia axillaris HOM05D003942 ORTHO05D004527 1.6e-148 530.0 390 71.3
Rhsim07G0016400 Rhododendron simsii HOM05D003942 ORTHO05D004527 1.0e-147 527.3 413 68.0
Nitab4.5_0008050g0040 Nicotiana tabacum HOM05D003942 ORTHO05D004527 3.3e-146 522.3 408 68.6
Nitab4.5_0001702g0090 Nicotiana tabacum HOM05D003942 ORTHO05D004527 5.6e-146 521.5 408 68.4
Potri.014G082900 Populus trichocarpa HOM05D003942 ORTHO05D004527 9.6e-146 520.8 416 67.5
Sabra14G0060100 Salix brachista HOM05D003942 ORTHO05D004527 1.6e-145 520.0 416 68.0
Cc02_g37870 Coffea canephora HOM05D003942 ORTHO05D004527 1.4e-144 516.9 413 65.6
TWI59G0555 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 1.4e-144 516.9 409 66.0
Lj9A582T85 Lonicera japonica HOM05D003942 ORTHO05D004527 1.8e-144 516.5 470 61.7
COL.COLO4_12700 Corchorus olitorius HOM05D003942 ORTHO05D004527 4.0e-144 515.4 419 66.1
Manes.05G036000 Manihot esculenta HOM05D003942 ORTHO05D004527 5.3e-144 515.0 404 67.6
CANSAT56G2580 Cannabis sativa HOM05D003942 ORTHO05D004527 6.9e-144 514.6 417 65.7
QL08p049021 Quercus lobata HOM05D003942 ORTHO05D004527 2.0e-143 513.1 413 66.3
PGSC0003DMG400021644 Solanum tuberosum HOM05D003942 ORTHO05D004527 2.6e-143 512.7 405 68.4
Cpa.g.sc18.243 Carica papaya HOM05D003942 ORTHO05D004527 4.5e-143 511.9 421 65.1
HanXRQChr16g0522811 Helianthus annuus HOM05D003942 ORTHO05D004527 4.5e-143 511.9 403 66.5
GSVIVG01026895001 Vitis vinifera HOM05D003942 ORTHO05D004527 5.8e-143 511.5 332 76.8
Sopen05g028240 Solanum pennellii HOM05D003942 ORTHO05D004527 7.6e-143 511.1 406 67.7
Lsat_1_v5_gn_4_36221 Lactuca sativa HOM05D003942 ORTHO05D004527 1.3e-142 510.4 407 66.3
Solyc05g049900.3 Solanum lycopersicum HOM05D003942 ORTHO05D004527 1.7e-142 510.0 405 67.9
CAN.G399.13 Capsicum annuum HOM05D003942 ORTHO05D004527 2.2e-142 509.6 410 67.1
Migut.N01440 Erythranthe guttata HOM05D003942 ORTHO05D004527 3.8e-142 508.8 403 65.5
TAR375G0209 Trochodendron aralioides HOM05D003942 ORTHO05D004527 3.8e-142 508.8 385 68.6
TWI23G1005 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 4.9e-142 508.4 413 66.1
Atru.chr5.464 Acer truncatum HOM05D003942 ORTHO05D004527 1.4e-141 506.9 425 64.0
HanXRQChr13g0426521 Helianthus annuus HOM05D003942 ORTHO05D004527 9.3e-141 504.2 385 67.8
Lsat_1_v5_gn_3_137060 Lactuca sativa HOM05D003942 ORTHO05D004527 1.6e-140 503.4 414 65.9
MSTRG.4859 Avicennia marina HOM05D003942 ORTHO05D004527 2.1e-140 503.1 404 63.1
MBI18_g25515_MAGBIO Magnolia biondii HOM05D003942 ORTHO05D004527 1.8e-139 500.0 413 63.0
MD01G1057600 Malus domestica HOM05D003942 ORTHO05D004527 3.0e-139 499.2 411 64.7
MD07G1139000 Malus domestica HOM05D003942 ORTHO05D004527 3.9e-139 498.8 397 65.7
CiPaw.01G059900 Carya illinoinensis HOM05D003942 ORTHO05D004527 5.1e-139 498.4 420 63.8
Eucgr.E00157 Eucalyptus grandis HOM05D003942 ORTHO05D004527 8.7e-139 497.7 394 67.0
Ciclev10020374m.g Citrus clementina HOM05D003942 ORTHO05D004527 4.3e-138 495.4 413 63.4
Cfa003938 Carpinus fangiana HOM05D003942 ORTHO05D004527 5.6e-138 495.0 415 63.6
Prupe.2G168100 Prunus persica HOM05D003942 ORTHO05D004527 1.6e-137 493.4 410 63.7
THA.LOC104817290 Tarenaya hassleriana HOM05D003942 ORTHO05D004527 1.1e-136 490.7 405 64.9
Oeu020562.1 Olea europaea HOM05D003942 ORTHO05D004527 2.4e-136 489.6 330 73.9
BcaC07g40631 Brassica carinata HOM05D003942 ORTHO05D004527 3.1e-136 489.2 383 66.6
A04p01160 Brassica napus HOM05D003942 ORTHO05D004527 3.1e-136 489.2 379 67.0
BraA04t15833Z Brassica rapa HOM05D003942 ORTHO05D004527 3.1e-136 489.2 379 67.0
C04p31390 Brassica napus HOM05D003942 ORTHO05D004527 1.2e-135 487.3 379 66.5
Aqoxy5G04009 Aquilegia oxysepala HOM05D003942 ORTHO05D004527 2.0e-135 486.5 415 64.1
BolC4t24688H Brassica oleracea HOM05D003942 ORTHO05D004527 2.6e-135 486.1 379 66.8
Sp5g02060 Schrenkiella parvula HOM05D003942 ORTHO05D004527 3.4e-135 485.7 405 64.4
Hund27285 Selenicereus undatus HOM05D003942 ORTHO05D004527 3.4e-135 485.7 410 62.0
FAN01G0250 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.5e-135 485.3 417 62.8
AL5G43590 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 1.7e-134 483.4 383 65.8
SalBow5G2271 Salvia bowleyana HOM05D003942 ORTHO05D004527 2.2e-134 483.0 414 60.9
FAN10G4090 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.9e-134 481.9 418 62.2
RcHm_v2.0_Chr1g0355071 Rosa chinensis HOM05D003942 ORTHO05D004527 4.9e-134 481.9 412 63.3
CDE09G0298 Ceratophyllum demersum HOM05D003942 ORTHO05D004527 6.5e-134 481.5 386 64.0
FAN06G2309 Fragaria x ananassa HOM05D003942 ORTHO05D004527 8.4e-134 481.1 418 62.2
PGR042G2566 Punica granatum HOM05D003942 ORTHO05D004527 1.1e-133 480.7 415 62.2
Carub.0005s2799 Capsella rubella HOM05D003942 ORTHO05D004527 1.4e-133 480.3 408 63.7
CiPaw.02G030000 Carya illinoinensis HOM05D003942 ORTHO05D004527 1.4e-133 480.3 359 68.0
SGA_v2.0_scaffold43G16422 Striga asiatica HOM05D003942 ORTHO05D004527 1.9e-133 479.9 407 62.9
FvH4_7g14170 Fragaria vesca HOM05D003942 ORTHO05D004527 2.5e-133 479.6 418 62.0
Aa31LG10G15570 Aethionema arabicum HOM05D003942 ORTHO05D004527 5.5e-133 478.4 384 66.7
ECA240G2096 Erigeron canadensis HOM05D003942 ORTHO05D004527 1.2e-132 477.2 332 72.9
Thhalv10006010m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 1.6e-132 476.9 406 63.3
Psat4g154400 Pisum sativum HOM05D003942 ORTHO05D004527 2.1e-132 476.5 409 61.9
Lalb_Chr03g0038211 Lupinus albus HOM05D003942 ORTHO05D004527 6.0e-132 474.9 412 61.7
Lalb_Chr04g0256871 Lupinus albus HOM05D003942 ORTHO05D004527 6.0e-132 474.9 348 68.7
FAN06G3470 Fragaria x ananassa HOM05D003942 ORTHO05D004527 7.9e-132 474.6 418 61.5
Lj3g0006137 Lotus japonicus HOM05D003942 ORTHO05D004527 1.0e-131 474.2 409 63.3
FAN03G2475 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.3e-131 473.8 418 61.2
BolC8t51203H Brassica oleracea HOM05D003942 ORTHO05D004527 3.0e-131 472.6 397 63.2
AUR62004344 Chenopodium quinoa HOM05D003942 ORTHO05D004527 3.0e-131 472.6 366 63.1
BraA09t40766Z Brassica rapa HOM05D003942 ORTHO05D004527 3.9e-131 472.2 350 68.0
C08p36210 Brassica napus HOM05D003942 ORTHO05D004527 8.7e-131 471.1 397 63.0
CARHR141140 Cardamine hirsuta HOM05D003942 ORTHO05D004527 7.4e-130 468.0 346 68.2
AL4G45080 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 9.7e-130 467.6 407 63.1
C04p71910 Brassica napus HOM05D003942 ORTHO05D004527 1.3e-129 467.2 406 61.3
BolC4t28689H Brassica oleracea HOM05D003942 ORTHO05D004527 2.8e-129 466.1 406 61.3
Carub.0004s2857 Capsella rubella HOM05D003942 ORTHO05D004527 2.8e-129 466.1 408 62.7
Glyma.03G010800 Glycine max HOM05D003942 ORTHO05D004527 2.8e-129 466.1 403 60.0
A09p53400 Brassica napus HOM05D003942 ORTHO05D004527 3.7e-129 465.7 408 61.8
VMungo0331G0006 Vigna mungo HOM05D003942 ORTHO05D004527 6.3e-129 464.9 401 61.1
BraA04t18872Z Brassica rapa HOM05D003942 ORTHO05D004527 8.2e-129 464.5 383 62.7
BcaC02g10219 Brassica carinata HOM05D003942 ORTHO05D004527 1.4e-128 463.8 378 64.8
AUR62022550 Chenopodium quinoa HOM05D003942 ORTHO05D004527 1.4e-128 463.8 360 62.8
Phvul.010G097300 Phaseolus vulgaris HOM05D003942 ORTHO05D004527 3.1e-128 462.6 401 60.8
Aa31LG1G27300 Aethionema arabicum HOM05D003942 ORTHO05D004527 4.1e-128 462.2 408 62.0
BcaC02g07065 Brassica carinata HOM05D003942 ORTHO05D004527 4.1e-128 462.2 404 61.9
Ca_23643_v3 Cicer arietinum L. HOM05D003942 ORTHO05D004527 6.9e-128 461.5 419 59.4
Thhalv10001467m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 6.9e-128 461.5 358 66.8
Sp4g27940 Schrenkiella parvula HOM05D003942 ORTHO05D004527 1.2e-127 460.7 348 67.5
BcaC09g52244 Brassica carinata HOM05D003942 ORTHO05D004527 1.5e-127 460.3 350 67.4
A04p34110 Brassica napus HOM05D003942 ORTHO05D004527 3.4e-127 459.1 383 62.4
arahy.Tifrunner.gnm1.ann1.Q5YAPI Arachis hypogaea HOM05D003942 ORTHO05D004527 1.3e-126 457.2 419 59.4
Ah.05g180690 Amaranthus hybridus HOM05D003942 ORTHO05D004527 3.8e-126 455.7 408 57.1
arahy.Tifrunner.gnm1.ann1.2H0UDK Arachis hypogaea HOM05D003942 ORTHO05D004527 3.8e-126 455.7 419 58.9
Glyma.07G071900 Glycine max HOM05D003942 ORTHO05D004527 1.4e-125 453.8 410 59.3
Haze_15488 Corylus avellana HOM05D003942 ORTHO05D004527 1.8e-123 446.8 411 58.6
TPR.G15979 Trifolium pratense HOM05D003942 ORTHO05D004527 1.1e-122 444.1 333 67.3
Medtr8g031000 Medicago truncatula HOM05D003942 ORTHO05D004527 4.3e-122 442.2 335 66.3
unitig_8.g3394 Utricularia gibba HOM05D003942 ORTHO05D004527 2.0e-119 433.3 404 57.7
AT2G45870 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 7.2e-117 424.9 352 64.5
Sc23g0002980 Simmondsia chinensis HOM05D003942 ORTHO05D004527 1.2e-116 424.1 363 62.3
HPP92_006558 Vanilla planifolia HOM05D003942 ORTHO05D004527 6.3e-113 411.8 345 61.4
EL10Ac1g00428 Beta vulgaris HOM05D003942 ORTHO05D004527 1.4e-112 410.6 304 66.8
ECA234G1137 Erigeron canadensis HOM05D003942 ORTHO05D004527 9.1e-112 407.9 292 70.9
Os03g0106000 Oryza sativa ssp. japonica HOM05D003942 ORTHO05D004527 4.2e-109 399.1 394 54.8
Zm00001eb000510 Zea mays HOM05D003942 ORTHO05D004527 4.1e-104 382.5 370 54.6
SEGI_25793 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 5.9e-103 378.6 339 58.4
SEGI_35716 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 4.2e-101 372.5 353 55.2
Mapoly0071s0037 Marchantia polymorpha HOM05D003942 ORTHO05D004527 1.8e-99 367.1 352 50.6
Pp3c4_15850 Physcomitrium patens HOM05D003942 ORTHO05D004527 6.8e-99 365.2 364 51.4
Duzib138G1448 Durio zibethinus HOM05D003942 ORTHO05D004527 3.7e-97 359.4 416 52.6
Pp3c3_22870 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.1e-96 356.3 398 49.0
Nn1g01512 Nelumbo nucifera HOM05D003942 ORTHO05D004527 4.1e-96 355.9 414 51.4
Gohir.D11G092500 Gossypium hirsutum HOM05D003942 ORTHO05D004527 3.2e-93 346.3 285 67.4
SMO364G0338 Selaginella moellendorffii HOM05D003942 ORTHO05D004527 2.1e-92 343.6 316 51.9
vmacro13277 Vaccinium macrocarpon HOM05D003942 ORTHO05D004527 1.1e-88 331.3 445 45.8
AT3G61320 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 3.4e-82 309.7 285 57.9
Mapoly0009s0131 Marchantia polymorpha HOM05D003942 ORTHO05D004527 8.0e-76 288.5 296 45.9
ATR0680G085 Amborella trichopoda HOM05D003942 ORTHO05D004527 4.1e-72 276.2 333 48.9
AagrBONN_evm.TU.Sc2ySwM_228.958 Anthoceros agrestis HOM05D003942 ORTHO05D004527 2.8e-68 263.5 312 42.6
AagrBONN_evm.TU.Sc2ySwM_344.3805 Anthoceros agrestis HOM05D003942 ORTHO05D004527 3.1e-67 260.0 318 41.2
Pp3c2_13700 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.0e-66 257.3 315 43.5
Pp3c1_3670 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.4e-64 249.2 287 42.5
Pp3c1_34560 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.2e-63 248.1 285 43.2
AagrBONN_evm.TU.Sc2ySwM_362.1957 Anthoceros agrestis HOM05D003942 ORTHO05D004527 4.6e-63 246.1 292 43.2
HPP92_011356 Vanilla planifolia HOM05D003942 ORTHO05D004527 7.8e-63 245.4 178 66.9
CBR_g44610 Chara braunii HOM05D000505 ORTHO05D000301 8.6e-62 241.9 321 42.4
FAN10G2852 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.1e-61 241.5 234 59.8
Oeu020563.1 Olea europaea HOM05D003942 ORTHO05D004527 1.9e-61 240.7 149 82.6
Pp3c11_9440 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.3e-61 240.0 295 39.3
Pp3c1_34600 Physcomitrium patens HOM05D003942 ORTHO05D004527 9.5e-61 238.4 290 40.0
CARHR171630 Cardamine hirsuta HOM05D003942 ORTHO05D004527 1.4e-59 234.6 227 58.1
MD01G1202300 Malus domestica HOM05D003942 ORTHO05D004527 3.1e-59 233.4 271 50.9
Pp3c14_6660 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.1e-56 224.9 267 40.4
Pp3c6_24250 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.1e-53 214.9 286 38.5
C05p09980 Brassica napus HOM05D003942 ORTHO05D004527 1.3e-49 201.4 201 56.7
CBR_g772 Chara braunii HOM05D003942 ORTHO05D004527 1.3e-49 201.4 332 36.7
AagrBONN_evm.TU.Sc2ySwM_228.2628 Anthoceros agrestis HOM05D003942 ORTHO05D004527 5.1e-46 189.5 150 56.7
FAN10G0144 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.5e-45 188.0 121 79.3
Cre06.g277650 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 6.9e-43 179.1 308 32.1
Cre16.g663450 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.5e-42 177.9 341 34.9
SEGI_34263 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 3.4e-42 176.8 183 54.6
Cre16.g662600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.3e-41 174.9 330 35.5
Cre16.g663400 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.9e-40 171.0 323 35.0
Cre11.g474700 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 7.1e-40 169.1 339 31.6
CBR_g38187 Chara braunii HOM05D003942 ORTHO05D004527 2.1e-39 167.5 228 39.9
HPP92_011355 Vanilla planifolia HOM05D003942 ORTHO05D004527 3.0e-38 163.7 141 59.6
Cre06.g261750 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 6.6e-38 162.5 340 29.7
Cre01.g038100 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 9.3e-32 142.1 306 28.4
PRCOL_00004040 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 3.5e-31 140.2 314 32.5
Cre07.g355300 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 4.6e-31 139.8 238 32.8
BcaB02g11262 Brassica carinata HOM05D003942 ORTHO05D004527 3.9e-30 136.7 119 56.3
PRCOL_00006054 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 8.1e-28 129.0 314 27.7
FAN10G3156 Fragaria x ananassa HOM05D000449 ORTHO05D004527 4.0e-27 126.7 80 80.0
Oeu020564.1 Olea europaea HOM05D003942 ORTHO05D004527 2.0e-26 124.4 77 80.5
Cre03.g199600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.7e-25 121.3 249 29.3
SEGI_01331 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.1e-24 118.6 100 60.0
PRCOL_00003097 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.4e-24 118.2 316 28.5
PRCOL_00003548 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 4.2e-24 116.7 313 31.0
Pp3c11_6680 Physcomitrium patens HOM05D003942 ORTHO05D004527 9.3e-24 115.5 101 49.5
MCO01G232 Micromonas commoda HOM05D003942 ORTHO05D004527 1.2e-23 115.2 326 28.2
Pp3c6_17920 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.8e-20 104.0 188 31.9
PRCOL_00005764 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 8.2e-20 102.4 316 28.5
MCO09G357 Micromonas commoda HOM05D003942 ORTHO05D004527 3.8e-17 93.6 358 27.1
PRCOL_00004398 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 7.1e-16 89.4 311 26.4
MCO01G007 Micromonas commoda HOM05D003942 ORTHO05D004527 2.1e-15 87.8 296 24.3
PSO478G4509 Papaver somniferum HOM05D003942 ORTHO05D004527 1.6e-12 78.2 104 47.1
Pp3c3_14710 Physcomitrium patens HOM05D003942 ORTHO05D004527 4.6e-07 60.1 143 28.7
Pp3c20_3390 Physcomitrium patens HOM05D003942 ORTHO05D004527 8.8e-06 55.8 92 40.2


User provided reference genes

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