Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 1.6e-143 512.7 251 100.0
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 9.0e-94 347.4 243 69.1
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 1.5e-93 346.7 251 68.5
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 2.9e-92 342.4 242 69.4
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 4.9e-92 341.7 243 68.3
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 8.4e-92 340.9 243 68.3
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.4e-91 340.1 217 76.0
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 4.2e-91 338.6 231 73.6
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 5.4e-91 338.2 240 69.6
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 7.1e-91 337.8 243 67.9
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 1.2e-90 337.0 243 67.5
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.1e-90 336.3 242 69.4
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 4.6e-90 335.1 243 67.1
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 6.0e-90 334.7 242 68.6
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 7.9e-90 334.3 254 66.5
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 1.0e-89 334.0 240 67.9
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 1.3e-89 333.6 248 69.0
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 2.3e-89 332.8 226 73.9
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 3.0e-89 332.4 236 66.9
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 3.9e-89 332.0 242 68.2
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 6.6e-89 331.3 230 70.0
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 1.9e-88 329.7 243 67.5
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 2.5e-88 329.3 243 65.8
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 7.3e-88 327.8 230 68.7
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.8e-87 325.9 243 65.4
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 3.6e-87 325.5 231 68.8
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 8.1e-87 324.3 237 67.1
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.4e-86 323.6 243 65.8
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 2.4e-86 322.8 219 73.1
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 3.1e-86 322.4 243 65.0
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 3.1e-86 322.4 272 62.1
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 4.0e-86 322.0 216 72.7
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.2e-85 320.5 257 62.3
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 1.2e-85 320.5 220 71.8
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 1.2e-85 320.5 220 71.8
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.5e-85 320.1 257 61.9
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 1.5e-85 320.1 240 66.2
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 3.4e-85 318.9 245 64.1
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 5.8e-85 318.2 248 64.1
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 7.6e-85 317.8 216 72.7
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 7.6e-85 317.8 222 69.4
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 9.9e-85 317.4 244 64.8
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 9.9e-85 317.4 231 65.4
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 9.9e-85 317.4 237 65.4
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 1.3e-84 317.0 308 55.2
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 2.2e-84 316.2 239 64.4
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 2.2e-84 316.2 219 69.4
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 2.2e-84 316.2 242 64.0
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 2.9e-84 315.8 241 65.1
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 2.9e-84 315.8 238 64.3
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 2.9e-84 315.8 197 75.1
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 3.8e-84 315.5 239 64.0
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 3.8e-84 315.5 262 60.7
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 1.4e-83 313.5 243 65.0
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.9e-83 313.2 236 64.0
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 2.4e-83 312.8 232 65.1
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 5.4e-83 311.6 222 69.8
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 7.1e-83 311.2 238 64.3
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 7.1e-83 311.2 239 63.2
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 1.6e-82 310.1 236 64.0
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 1.0e-81 307.4 223 68.6
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 1.8e-81 306.6 239 63.6
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 2.3e-81 306.2 251 61.0
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 2.3e-81 306.2 232 63.4
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 3.0e-81 305.8 243 62.1
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 3.9e-81 305.4 240 63.8
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 5.1e-81 305.1 236 62.3
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 8.7e-81 304.3 284 57.0
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 1.1e-80 303.9 255 59.2
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 2.5e-80 302.8 247 61.1
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 4.3e-80 302.0 247 62.8
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 9.6e-80 300.8 201 71.6
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 6.9e-78 294.7 242 60.3
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 1.5e-77 293.5 234 63.2
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 1.3e-76 290.4 236 64.4
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 1.1e-75 287.3 175 78.9
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 2.3e-73 279.6 204 67.6
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 1.9e-72 276.6 201 66.7
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 2.5e-72 276.2 212 69.8
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 3.3e-72 275.8 224 62.5
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 5.7e-72 275.0 221 61.5
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 4.8e-71 271.9 205 67.3
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 2.4e-70 269.6 240 60.0
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 1.5e-69 266.9 215 63.3
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 6.1e-66 255.0 230 58.7
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 1.0e-65 254.2 208 64.9
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 2.1e-58 229.9 173 66.5
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 1.1e-56 224.2 175 66.9
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 6.3e-55 218.4 172 64.0
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 4.1e-54 215.7 172 62.8
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 3.6e-50 202.6 222 50.9
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 3.9e-49 199.1 175 58.3
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 1.5e-48 197.2 383 35.8
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 9.7e-48 194.5 212 50.5
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 4.1e-46 189.1 204 47.5
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 7.7e-45 184.9 244 40.2
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 2.9e-44 183.0 208 45.7
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 5.0e-44 182.2 230 47.0
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 1.1e-43 181.0 166 56.6
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 2.3e-41 173.3 155 58.7
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 5.2e-41 172.2 261 42.9
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 4.4e-40 169.1 145 62.1
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 1.1e-38 164.5 212 42.5
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 4.5e-37 159.1 251 41.4
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 4.2e-35 152.5 177 49.2
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 9.8e-32 141.4 167 48.5
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 3.1e-30 136.3 214 42.1
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 4.2e-27 125.9 71 78.9
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 1.0e-25 121.3 69 76.8
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 4.1e-22 109.4 205 32.7
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 1.9e-19 100.5 59 78.0
HanXRQChr13g0397031 Helianthus annuus HOM05D004613 ORTHO05D006095 3.3e-19 99.8 113 54.0
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 3.9e-12 76.3 95 45.3
SEGI_04064 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 2.5e-11 73.6 52 61.5
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 3.3e-11 73.2 49 67.3
C09p05710 Brassica napus HOM05D004613 ORTHO05D006095 7.5e-08 62.0 50 54.0
CSS0002320 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
CSS0009134 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
CSS0011661 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
CSS0019992 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
CSS0023662 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
CSS0033019 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
CSS0041443 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 46 65.2
Cre02.g117300 Chlamydomonas reinhardtii HOM05D004613 ORTHO05D006095 1.1e-06 58.2 154 29.9
C05p42320 Brassica napus HOM05D004613 ORTHO05D006095 3.2e-06 56.6 64 43.8


User provided reference genes

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