Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 7.9e-143 510.4 249 100.0
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 3.3e-96 355.5 245 70.2
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 9.5e-96 354.0 247 70.0
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 3.6e-95 352.1 245 69.4
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 4.7e-95 351.7 246 71.5
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 2.3e-94 349.4 245 71.0
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 2.0e-93 346.3 244 68.9
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 3.4e-93 345.5 247 69.2
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 4.4e-93 345.1 242 68.2
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 9.8e-93 344.0 245 68.2
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.7e-92 343.2 243 67.5
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 6.4e-92 341.3 242 68.2
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 8.3e-92 340.9 246 67.1
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 8.3e-92 340.9 248 66.9
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 8.3e-92 340.9 243 67.1
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 8.3e-92 340.9 245 67.8
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.1e-91 340.5 243 67.9
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 1.9e-91 339.7 240 67.5
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 2.4e-91 339.3 245 67.8
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 2.4e-91 339.3 240 68.3
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 4.1e-91 338.6 246 67.5
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 4.1e-91 338.6 244 66.8
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 5.4e-91 338.2 244 68.0
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 5.4e-91 338.2 247 67.2
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 1.2e-90 337.0 280 60.7
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 2.7e-90 335.9 244 66.8
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 3.5e-90 335.5 244 68.0
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 4.6e-90 335.1 246 66.7
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 1.7e-89 333.2 249 67.5
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.0e-89 332.4 247 68.8
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 6.6e-89 331.3 246 67.1
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 1.1e-88 330.5 246 65.4
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 1.5e-88 330.1 247 68.8
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 1.5e-88 330.1 256 65.2
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 1.9e-88 329.7 243 65.4
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 3.3e-88 328.9 246 66.3
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 4.3e-88 328.6 244 65.6
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 4.3e-88 328.6 248 60.9
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 5.6e-88 328.2 247 64.8
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 7.3e-88 327.8 247 68.0
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 1.2e-87 327.0 244 63.9
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.2e-87 327.0 246 66.7
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 1.2e-87 327.0 244 64.3
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.2e-87 327.0 246 61.8
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 2.1e-87 326.2 243 62.1
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 2.8e-87 325.9 245 60.4
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.6e-87 325.5 246 66.3
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 3.6e-87 325.5 247 61.9
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 6.2e-87 324.7 244 64.3
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 6.2e-87 324.7 245 66.5
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.1e-86 323.9 244 64.3
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 1.4e-86 323.6 246 61.0
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 1.4e-86 323.6 246 61.8
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.1e-86 322.4 246 65.4
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 3.1e-86 322.4 246 60.6
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 4.0e-86 322.0 246 60.6
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 5.2e-86 321.6 257 62.6
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.8e-86 321.2 246 65.9
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 8.9e-86 320.9 245 65.3
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 8.9e-86 320.9 244 63.5
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 1.5e-85 320.1 273 59.0
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 2.0e-85 319.7 246 65.4
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 2.6e-85 319.3 244 63.5
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 2.6e-85 319.3 246 59.8
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 4.4e-85 318.5 245 61.6
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 1.3e-84 317.0 243 62.1
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 1.7e-84 316.6 248 60.5
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 2.2e-84 316.2 217 69.1
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 4.9e-84 315.1 259 62.9
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 6.4e-84 314.7 239 64.0
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 6.4e-84 314.7 234 65.8
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 1.9e-83 313.2 247 59.1
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 2.4e-83 312.8 244 61.5
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 2.4e-83 312.8 244 63.5
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 2.4e-83 312.8 232 65.1
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 4.1e-83 312.0 244 63.1
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 5.4e-83 311.6 247 61.5
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 5.4e-83 311.6 247 58.7
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.2e-82 310.5 244 58.6
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 1.6e-82 310.1 238 62.2
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 2.7e-82 309.3 247 57.9
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.6e-82 308.5 262 58.0
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 6.0e-82 308.1 247 58.3
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 7.8e-82 307.8 247 57.9
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 7.8e-82 307.8 242 62.0
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 3.0e-81 305.8 247 57.9
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 3.9e-81 305.4 243 58.4
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 1.1e-80 303.9 244 61.5
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.1e-80 303.9 178 80.3
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 1.9e-80 303.1 243 58.0
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 1.9e-80 303.1 243 58.0
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 5.6e-80 301.6 244 58.6
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 7.3e-80 301.2 245 58.4
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 3.6e-79 298.9 247 58.3
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 6.2e-79 298.1 243 57.2
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.1e-78 297.4 237 60.3
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.1e-78 297.4 237 60.3
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 2.4e-78 296.2 243 58.0
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 4.0e-78 295.4 243 57.6
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.5e-77 293.5 243 56.8
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 1.5e-77 293.5 244 57.4
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 4.4e-77 292.0 245 59.6
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 7.6e-77 291.2 291 52.6
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 7.6e-77 291.2 243 56.8
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 9.9e-77 290.8 186 69.9
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 9.9e-77 290.8 243 57.2
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 1.7e-76 290.0 246 59.3
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 4.9e-76 288.5 171 77.2
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 9.2e-75 284.3 216 63.4
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.6e-74 283.5 244 58.6
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 3.9e-73 278.9 177 72.3
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.8e-70 270.0 270 51.1
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 1.3e-68 263.8 199 63.3
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 1.7e-68 263.5 201 64.2
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 2.2e-68 263.1 201 64.2
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 6.6e-65 251.5 249 51.4
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 4.3e-64 248.8 244 51.6
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 7.3e-64 248.1 225 52.4
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 8.1e-63 244.6 184 60.9
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 6.4e-60 235.0 241 51.5
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 7.1e-59 231.5 243 49.4
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.1e-58 229.9 172 61.0
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.3e-57 227.3 222 50.0
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 2.3e-57 226.5 193 56.5
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 6.7e-57 224.9 129 78.3
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.9e-56 223.4 244 50.4
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 3.4e-53 212.6 131 75.6
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.1e-51 207.6 126 76.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.8e-49 200.3 234 46.2
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 6.7e-49 198.4 183 53.0
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 5.3e-46 188.7 251 49.0
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 2.0e-45 186.8 181 51.9
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.7e-42 176.4 108 75.9
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 1.6e-39 167.2 128 57.0
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 6.9e-38 161.8 279 37.3
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.6e-37 159.8 140 57.1
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.9e-35 153.7 253 40.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 2.1e-34 150.2 192 43.8
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 7.9e-34 148.3 219 38.4
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.5e-32 144.1 178 43.3
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 3.7e-31 139.4 138 49.3
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 7.2e-27 125.2 79 70.9
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 1.8e-22 110.5 65 72.3
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 5.0e-20 102.4 99 50.5
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.2e-17 92.4 103 51.5
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 2.2e-15 87.0 53 84.9
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.8e-14 84.0 52 76.9
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 8.8e-09 65.1 192 28.1


User provided reference genes

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