Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 1.2e-123 446.4 215 100.0
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 1.7e-93 346.3 212 77.4
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.5e-85 317.8 211 72.0
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.0e-82 308.9 211 70.1
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 2.8e-80 302.4 211 68.7
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 7.7e-78 294.3 211 67.3
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.5e-68 262.7 211 63.0
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 6.3e-64 248.1 210 58.1
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 6.3e-64 248.1 210 58.1
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 1.2e-62 243.8 210 57.6
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 4.3e-60 235.3 210 55.2
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-50 203.8 178 54.5
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.6e-49 199.5 212 52.4
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.3e-44 182.2 212 46.2
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.2e-43 180.6 212 45.8
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 2.0e-41 173.3 210 42.9
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 2.2e-40 169.9 210 42.4
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 4.9e-40 168.7 202 42.6
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.1e-39 167.5 212 43.4
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 1.4e-39 167.2 204 42.2
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 2.4e-39 166.4 206 41.7
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 5.4e-39 165.2 204 41.7
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.2e-38 164.1 202 41.6
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 3.0e-37 159.5 202 41.6
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 5.1e-37 158.7 202 42.1
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 2.5e-36 156.4 177 46.9
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 9.5e-36 154.5 202 41.1
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 2.1e-35 153.3 202 40.6
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 3.1e-34 149.4 204 40.2
Zm00001eb137410 Zea mays HOM05D004865 ORTHO05D005949 3.1e-34 149.4 210 40.0
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 4.0e-34 149.1 183 40.4
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 2.6e-33 146.4 202 38.6
Os04g0308400 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 2.6e-33 146.4 212 40.6
Os04g0310200 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 2.6e-33 146.4 212 40.6
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.4e-33 146.0 208 39.4
Zm00001eb137380 Zea mays HOM05D004865 ORTHO05D005949 5.8e-33 145.2 210 39.0
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 1.3e-32 144.1 204 39.2
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 2.2e-32 143.3 204 40.7
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.9e-32 142.9 205 37.1
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.9e-32 142.9 205 37.1
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 8.4e-32 141.4 198 41.9
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.1e-31 141.0 184 41.3
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 1.9e-31 140.2 203 38.9
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.6e-30 137.1 208 40.9
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 2.1e-30 136.7 212 39.6
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 2.1e-30 136.7 202 38.6
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 2.1e-30 136.7 202 38.6
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 3.5e-30 136.0 178 41.0
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 6.0e-30 135.2 180 40.6
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 1.3e-29 134.0 202 38.1
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 2.3e-29 133.3 199 37.7
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.3e-29 133.3 146 45.9
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 3.0e-29 132.9 202 39.6
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 3.3e-28 129.4 145 46.9
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 5.6e-28 128.6 199 36.2
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 1.6e-27 127.1 142 46.5
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 1.6e-27 127.1 142 46.5
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 1.6e-27 127.1 184 40.8
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 2.1e-27 126.7 215 35.3
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 5.2e-26 122.1 140 43.6
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-25 120.9 129 45.7
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-25 120.9 129 45.7
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-25 120.9 129 45.7
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.5e-25 120.6 142 41.5
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.0e-25 120.2 111 50.5
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 2.6e-25 119.8 128 45.3
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 2.6e-25 119.8 128 45.3
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.8e-25 118.6 179 39.1
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 7.6e-25 118.2 179 37.4
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 7.6e-25 118.2 131 43.5
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 7.6e-25 118.2 131 43.5
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.6e-25 118.2 181 38.7
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 9.9e-25 117.9 190 37.4
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 1.7e-24 117.1 129 44.2
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 1.7e-24 117.1 178 37.1
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 2.9e-24 116.3 172 35.5
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 2.9e-24 116.3 140 42.9
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 1.4e-23 114.0 171 40.4
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 3.2e-23 112.8 203 36.9
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.2e-23 112.8 204 35.3
EL10Ac6g13635 Beta vulgaris HOM05D004865 ORTHO05D005949 7.1e-23 111.7 214 33.2
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 9.3e-23 111.3 183 38.8
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 9.3e-23 111.3 111 46.8
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 1.6e-22 110.5 165 37.0
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 7.8e-22 108.2 198 35.9
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 3.9e-21 105.9 187 35.8
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.5e-20 103.2 178 36.0
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.3e-20 102.8 219 30.1
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.3e-20 102.4 180 32.2
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 5.6e-20 102.1 212 31.6
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 3.6e-19 99.4 214 30.4
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 3.6e-19 99.4 184 38.6
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.6e-19 99.4 181 33.7
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.2e-19 98.6 193 31.1
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.1e-18 97.8 142 38.0
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 1.1e-18 97.8 214 30.4
EL10Ac6g13634 Beta vulgaris HOM05D004865 ORTHO05D005949 1.8e-18 97.1 150 40.7
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.4e-18 96.7 165 38.8
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.4e-18 96.7 144 38.2
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.1e-18 96.3 205 32.2
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.3e-18 95.5 175 33.7
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 9.0e-18 94.7 189 34.9
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.0e-17 93.6 131 42.7
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.3e-16 90.9 160 33.8
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.3e-16 90.9 165 33.9
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.7e-16 90.5 170 30.0
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-16 90.5 181 31.5
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-16 90.5 159 35.2
Lj6P371T11 Lonicera japonica HOM05D004865 ORTHO05D005949 2.4e-15 86.7 96 43.8
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.2e-15 85.9 205 30.2
Lsat_1_v5_gn_0_11001 Lactuca sativa HOM05D004865 ORTHO05D005949 7.1e-15 85.1 197 33.5
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 9.3e-15 84.7 156 33.3
ECA233G0596 Erigeron canadensis HOM05D004865 ORTHO05D000001 1.6e-14 84.0 171 35.7
Lsat_1_v5_gn_6_87560 Lactuca sativa HOM05D004865 ORTHO05D005949 7.9e-14 81.6 185 34.1
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.0e-13 81.3 182 31.3
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 1.3e-13 80.9 68 50.0
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 5.1e-13 79.0 193 33.7
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.1e-13 79.0 209 29.2
ECA233G5781 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.5e-12 77.4 135 38.5
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.5e-12 76.6 124 39.5
HanXRQChr13g0416751 Helianthus annuus HOM05D004865 ORTHO05D005949 3.3e-12 76.3 204 31.9
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 3.3e-12 76.3 204 31.9
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 5.6e-12 75.5 143 32.9
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 9.6e-12 74.7 140 32.1
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 1.3e-11 74.3 193 33.2
HanXRQChr03g0085651 Helianthus annuus HOM05D004865 ORTHO05D005949 2.8e-11 73.2 153 34.0
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 1.4e-10 70.9 195 32.8
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 1.8e-10 70.5 92 39.1
Prupe.2G116900 Prunus persica HOM05D004865 ORTHO05D005949 2.4e-10 70.1 103 36.9
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.0e-10 69.3 179 30.7
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.0e-10 69.3 176 30.7
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.2e-09 67.8 94 39.4
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 5.8e-09 65.5 147 29.3
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.8e-08 62.8 109 34.9
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 5.5e-07 58.9 165 28.5
EL10Ac3g05478 Beta vulgaris HOM05D009434 ORTHO05D011504 7.1e-07 58.5 114 34.2
HanXRQChr03g0085641 Helianthus annuus HOM05D004865 ORTHO05D005949 2.1e-06 57.0 141 30.5
Sc23g0005400 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.1e-06 57.0 138 29.7
Sc24g0002640 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.5e-06 56.2 144 30.6


User provided reference genes

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