Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 2.0e-74 282.3 139 100.0
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 4.9e-33 144.8 140 56.4
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 1.1e-32 143.7 141 56.7
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 5.4e-32 141.4 141 53.2
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 7.8e-31 137.5 143 53.1
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 5.2e-27 124.8 133 51.9
DCAR_029798 Daucus carota HOM05D001383 ORTHO05D000309 5.8e-26 121.3 116 52.6
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 5.8e-26 121.3 100 57.0
DCAR_017338 Daucus carota HOM05D001383 ORTHO05D000309 1.9e-21 106.3 96 53.1
DCAR_017237 Daucus carota HOM05D027373 ORTHO05D000309 1.6e-15 86.7 137 40.1
DCAR_010559 Daucus carota HOM05D027373 ORTHO05D000309 1.1e-13 80.5 137 39.4
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 5.3e-11 71.6 88 46.6
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 9.0e-11 70.9 139 37.4
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.8e-10 68.2 110 38.2
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.8e-10 68.2 110 38.2
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 3.8e-09 65.5 120 35.8
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.9e-09 65.1 80 42.5
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.9e-09 65.1 80 42.5
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-08 63.5 80 42.5
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.4e-08 63.5 79 39.2
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.9e-08 63.2 76 40.8
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 1.9e-08 63.2 99 38.4
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.4e-08 62.8 62 45.2
HanXRQChr03g0077471 Helianthus annuus HOM05D001383 ORTHO05D000309 2.4e-08 62.8 77 40.3
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.2e-08 62.4 80 41.2
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 3.2e-08 62.4 79 46.8
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.2e-08 62.4 79 40.5
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-08 62.0 71 42.3
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-08 62.0 80 41.2
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-08 62.0 122 33.6
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 4.2e-08 62.0 66 43.9
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.4e-08 61.6 59 47.5
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.4e-08 61.6 59 47.5
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.1e-08 61.2 122 29.5
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 7.1e-08 61.2 87 43.7
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-07 60.5 122 28.7
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.6e-07 60.1 62 43.5
Manes.17G014501 Manihot esculenta HOM05D027373 ORTHO05D000309 1.6e-07 60.1 89 38.2
Prupe.8G073400 Prunus persica HOM05D001383 ORTHO05D000309 1.6e-07 60.1 68 47.1
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-07 59.7 68 36.8
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-07 59.7 73 39.7
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-07 59.7 59 45.8
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-07 59.7 62 41.9
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-07 59.7 59 45.8
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 2.1e-07 59.7 99 34.3
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-07 59.7 87 42.5
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-07 59.7 87 42.5
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-07 59.7 75 44.0
SGA_v2.0_scaffold185G40087 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-07 59.7 120 35.8
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 2.7e-07 59.3 68 36.8
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 2.7e-07 59.3 101 38.6
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 2.7e-07 59.3 82 35.4
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 2.7e-07 59.3 101 38.6
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-07 58.9 86 33.7
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 3.5e-07 58.9 69 40.6
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 3.5e-07 58.9 86 38.4
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.5e-07 58.9 62 41.9
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 4.6e-07 58.5 63 38.1
DCAR_012605 Daucus carota HOM05D001383 ORTHO05D000309 4.6e-07 58.5 62 46.8
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.6e-07 58.5 69 46.4
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 4.6e-07 58.5 62 45.2
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 4.6e-07 58.5 87 39.1
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 4.6e-07 58.5 116 29.3
EL10Ac5g12256 Beta vulgaris HOM05D008388 ORTHO05D000309 6.0e-07 58.2 108 34.3
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.0e-07 58.2 69 46.4
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 6.0e-07 58.2 75 42.7
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 6.0e-07 58.2 86 37.2
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 7.9e-07 57.8 46 54.3
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 7.9e-07 57.8 87 35.6
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 57.8 116 30.2
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.9e-07 57.8 87 41.4
SalBow6G0195 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-07 57.8 73 41.1
SalBow7G1419 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-07 57.8 73 41.1
SalBow7G2169 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-07 57.8 73 41.1
EL10Ac9g22366 Beta vulgaris HOM05D008388 ORTHO05D000309 1.0e-06 57.4 108 34.3
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.0e-06 57.4 65 43.1
Eucgr.D01113 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.0e-06 57.4 56 46.4
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 1.0e-06 57.4 87 37.9
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 1.0e-06 57.4 111 33.3
Oeu001038.1 Olea europaea HOM05D001383 ORTHO05D000309 1.0e-06 57.4 79 40.5
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 1.0e-06 57.4 83 37.3
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 1.0e-06 57.4 76 39.5
Eucgr.B01616 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 57.0 76 43.4
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 57.0 60 43.3
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 57.0 107 34.6
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 57.0 120 35.0
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 115 31.3
Nitab4.5_0022073g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.3e-06 57.0 87 40.2
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 1.3e-06 57.0 77 40.3
CAN.G162.74 Capsicum annuum HOM05D004040 ORTHO05D000309 1.7e-06 56.6 84 35.7
CAN.G200.12 Capsicum annuum HOM05D004040 ORTHO05D000309 1.7e-06 56.6 71 38.0
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.7e-06 56.6 104 30.8
DCAR_014868 Daucus carota HOM05D001383 ORTHO05D000309 1.7e-06 56.6 62 46.8
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.7e-06 56.6 69 42.0
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-06 56.6 70 41.4
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-06 56.6 70 41.4
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 2.3e-06 56.2 116 25.9
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 2.3e-06 56.2 130 26.2
DCAR_026951 Daucus carota HOM05D001383 ORTHO05D000309 2.3e-06 56.2 62 43.5
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.3e-06 56.2 80 40.0
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-06 56.2 59 42.4
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-06 56.2 71 36.6
Lsat_1_v5_gn_0_6841 Lactuca sativa HOM05D001383 ORTHO05D000309 2.3e-06 56.2 74 40.5
Manes.17G011733 Manihot esculenta HOM05D001383 ORTHO05D000309 2.3e-06 56.2 75 40.0
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 2.3e-06 56.2 111 34.2
QL06p049616 Quercus lobata HOM05D001383 ORTHO05D000309 2.3e-06 56.2 86 36.0
Rhsim08G0011500 Rhododendron simsii HOM05D001383 ORTHO05D000309 2.3e-06 56.2 85 35.3
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-06 55.8 99 36.4
CAN.G1288.6 Capsicum annuum HOM05D004040 ORTHO05D000309 3.0e-06 55.8 67 38.8
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 3.0e-06 55.8 79 39.2
Cfa008536 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.9e-06 55.5 59 44.1
Cfa018419 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.9e-06 55.5 70 35.7
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 3.9e-06 55.5 85 37.6
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.9e-06 55.5 69 39.1
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.9e-06 55.5 70 40.0
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 3.9e-06 55.5 91 34.1
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 3.9e-06 55.5 91 34.1
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.9e-06 55.5 74 40.5
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 3.9e-06 55.5 86 38.4
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 3.9e-06 55.5 90 35.6
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 5.1e-06 55.1 72 40.3
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.1e-06 55.1 80 36.2
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.1e-06 55.1 79 36.7
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-06 55.1 135 27.4
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-06 55.1 109 31.2
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 5.1e-06 55.1 69 37.7
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 5.1e-06 55.1 77 39.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 5.1e-06 55.1 63 44.4
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 5.1e-06 55.1 63 41.3
Sopen00g004430 Solanum pennellii HOM05D000679 ORTHO05D000482 5.1e-06 55.1 72 40.3
SGA_v2.0_scaffold1G00312 Striga asiatica HOM05D001383 ORTHO05D000309 5.1e-06 55.1 97 36.1
EL10Ac2g03429 Beta vulgaris HOM05D008388 ORTHO05D000309 6.6e-06 54.7 107 33.6
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 6.6e-06 54.7 87 39.1
HanXRQChr02g0055571 Helianthus annuus HOM05D001383 ORTHO05D000309 6.6e-06 54.7 122 34.4
HanXRQChr04g0101711 Helianthus annuus HOM05D001383 ORTHO05D000309 6.6e-06 54.7 122 33.6
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.6e-06 54.7 138 31.9
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.6e-06 54.7 77 36.4
Lsat_1_v5_gn_5_119041 Lactuca sativa HOM05D001383 ORTHO05D000309 6.6e-06 54.7 59 44.1
Nitab4.5_0001031g0210 Nicotiana tabacum HOM05D002252 ORTHO05D002184 6.6e-06 54.7 77 37.7
Oeu043155.1 Olea europaea HOM05D001383 ORTHO05D000309 6.6e-06 54.7 75 38.7
SGA_v2.0_scaffold10G05216 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 54.7 135 31.9
SGA_v2.0_scaffold13G06336 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 54.7 135 31.9
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 54.7 73 45.2
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 8.7e-06 54.3 103 35.0
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 8.7e-06 54.3 82 35.4
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.7e-06 54.3 76 35.5
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 8.7e-06 54.3 70 40.0
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 8.7e-06 54.3 70 41.4
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 8.7e-06 54.3 93 35.5
SalBow6G1404 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.7e-06 54.3 75 37.3


User provided reference genes

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