Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015879 Daucus carota HOM05D006102 ORTHO05D007550 5.1e-37 157.1 75 100.0
vmacro22440 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 2.6e-20 101.7 63 74.6
Lsat_1_v5_gn_3_129280 Lactuca sativa HOM05D006102 ORTHO05D007550 3.3e-20 101.3 47 91.5
Cc02_g24460 Coffea canephora HOM05D006102 ORTHO05D007550 4.4e-20 100.9 47 91.5
HanXRQChr03g0093281 Helianthus annuus HOM05D006102 ORTHO05D007550 5.7e-20 100.5 47 91.5
Actinidia12183 Actinidia chinensis HOM05D006102 ORTHO05D007550 1.3e-19 99.4 47 91.5
Actinidia27577 Actinidia chinensis HOM05D006102 ORTHO05D007550 1.3e-19 99.4 47 91.5
CSS0002341 Camellia sinensis var. sinensis HOM05D006102 ORTHO05D007550 1.3e-19 99.4 47 91.5
Sabra14G0046000 Salix brachista HOM05D006102 ORTHO05D007550 1.3e-19 99.4 47 89.4
vmacro13446 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 1.3e-19 99.4 47 91.5
Duzib138G0330 Durio zibethinus HOM05D006102 ORTHO05D007550 1.7e-19 99.0 47 89.4
Potri.014G066000 Populus trichocarpa HOM05D006102 ORTHO05D007550 1.7e-19 99.0 47 89.4
GSVIVG01018154001 Vitis vinifera HOM05D006102 ORTHO05D007550 1.7e-19 99.0 47 89.4
COL.COLO4_12485 Corchorus olitorius HOM05D006102 ORTHO05D007550 2.2e-19 98.6 47 87.2
Gohir.A11G078500 Gossypium hirsutum HOM05D006102 ORTHO05D007550 2.2e-19 98.6 47 87.2
Gohir.D11G083100 Gossypium hirsutum HOM05D006102 ORTHO05D007550 2.2e-19 98.6 47 87.2
Gorai.007G088700 Gossypium raimondii HOM05D006102 ORTHO05D007550 2.2e-19 98.6 47 87.2
Manes.05G049400 Manihot esculenta HOM05D006102 ORTHO05D007550 3.7e-19 97.8 47 89.4
Sc02g0002820 Simmondsia chinensis HOM05D006102 ORTHO05D007550 4.8e-19 97.4 48 83.3
Thecc.01G384200 Theobroma cacao HOM05D006102 ORTHO05D007550 4.8e-19 97.4 47 87.2
MELO3C005957.2 Cucumis melo HOM05D006102 ORTHO05D007550 6.3e-19 97.1 72 59.7
CsaV3_3G007350 Cucumis sativus L. HOM05D006102 ORTHO05D007550 6.3e-19 97.1 72 59.7
Dinv43669 Davidia involucrata HOM05D006102 ORTHO05D007550 6.3e-19 97.1 47 93.6
Aa31LG5G130 Aethionema arabicum HOM05D006102 ORTHO05D007550 8.2e-19 96.7 49 81.6
Thhalv10028362m.g Eutrema salsugineum HOM05D006102 ORTHO05D007550 1.4e-18 95.9 47 85.1
FAN06G2296 Fragaria x ananassa HOM05D006102 ORTHO05D007550 1.4e-18 95.9 52 80.8
Ah.05g173810 Amaranthus hybridus HOM05D006102 ORTHO05D007550 1.8e-18 95.5 47 83.0
AL6G53450 Arabidopsis lyrata HOM05D006102 ORTHO05D007550 1.8e-18 95.5 47 83.0
AT4G00060 Arabidopsis thaliana HOM05D006102 ORTHO05D007550 1.8e-18 95.5 47 83.0
Carub.0006s3716 Capsella rubella HOM05D006102 ORTHO05D007550 1.8e-18 95.5 47 83.0
Lj7P537G26 Lonicera japonica HOM05D006102 ORTHO05D007550 1.8e-18 95.5 47 87.2
Sp6g00130 Schrenkiella parvula HOM05D006102 ORTHO05D007550 1.8e-18 95.5 47 83.0
ClCG05G000200 Citrullus lanatus HOM05D006102 ORTHO05D007550 2.4e-18 95.1 47 83.0
Sed0013724 Sechium edule HOM05D006102 ORTHO05D007550 2.4e-18 95.1 47 83.0
TAR375G0254 Trochodendron aralioides HOM05D006102 ORTHO05D007550 2.4e-18 95.1 47 83.0
Ca_19854_v3 Cicer arietinum L. HOM05D006102 ORTHO05D007550 3.1e-18 94.7 63 66.7
PSO017G2680 Papaver somniferum HOM05D006102 ORTHO05D007550 3.1e-18 94.7 47 83.0
PSO170G5751 Papaver somniferum HOM05D006102 ORTHO05D007550 3.1e-18 94.7 47 83.0
CANSAT56G2478 Cannabis sativa HOM05D006102 ORTHO05D007550 4.1e-18 94.4 47 85.1
AUR62004162 Chenopodium quinoa HOM05D006102 ORTHO05D007550 4.1e-18 94.4 47 80.9
AUR62013660 Chenopodium quinoa HOM05D006102 ORTHO05D007550 4.1e-18 94.4 47 80.9
Ciclev10018476m.g Citrus clementina HOM05D006102 ORTHO05D007550 4.1e-18 94.4 47 85.1
TWI59G0915 Tripterygium wilfordii HOM05D006102 ORTHO05D007550 4.1e-18 94.4 47 85.1
Nn1g00999 Nelumbo nucifera HOM05D006102 ORTHO05D007550 5.3e-18 94.0 47 78.7
Os06g0669275 Oryza sativa ssp. japonica HOM05D006102 ORTHO05D007550 5.3e-18 94.0 47 80.9
Aqoxy7G00755 Aquilegia oxysepala HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 80.9
BcaC01g04890 Brassica carinata HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 80.9
C03p32590 Brassica napus HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 80.9
BolC3t15598H Brassica oleracea HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 80.9
BraA03t11926Z Brassica rapa HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 80.9
CARHR248110 Cardamine hirsuta HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 80.9
FAN03G1880 Fragaria x ananassa HOM05D006102 ORTHO05D007550 7.0e-18 93.6 47 85.1
FvH4_7g11041 Fragaria vesca HOM05D006102 ORTHO05D007550 9.1e-18 93.2 47 85.1
FAN06G2175 Fragaria x ananassa HOM05D006102 ORTHO05D007550 9.1e-18 93.2 47 85.1
FAN10G3138 Fragaria x ananassa HOM05D006102 ORTHO05D007550 9.1e-18 93.2 47 85.1
MD07G1115100 Malus domestica HOM05D006102 ORTHO05D007550 9.1e-18 93.2 47 85.1
Prupe.2G137200 Prunus persica HOM05D006102 ORTHO05D007550 9.1e-18 93.2 47 85.1
THA.LOC104801481 Tarenaya hassleriana HOM05D006102 ORTHO05D007550 9.1e-18 93.2 47 80.9
Eucgr.D02494 Eucalyptus grandis HOM05D006102 ORTHO05D007550 1.6e-17 92.4 47 80.9
Migut.N01612 Erythranthe guttata HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
Lj3g0012088 Lotus japonicus HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
Lalb_Chr07g0190291 Lupinus albus HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
Medtr4g027425 Medicago truncatula HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
Phvul.010G071766 Phaseolus vulgaris HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
Psat0s3685g0040 Pisum sativum HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
RcHm_v2.0_Chr1g0349071 Rosa chinensis HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
TPR.G4985 Trifolium pratense HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 83.0
HPP92_005330 Vanilla planifolia HOM05D006102 ORTHO05D007550 2.0e-17 92.0 47 78.7
CiPaw.14G025500 Carya illinoinensis HOM05D006102 ORTHO05D007550 2.6e-17 91.7 47 80.9
FAN10G3898 Fragaria x ananassa HOM05D006102 ORTHO05D007550 3.5e-17 91.3 47 83.0
arahy.Tifrunner.gnm1.ann1.1V3LDQ Arachis hypogaea HOM05D006102 ORTHO05D007550 4.5e-17 90.9 47 80.9
Glyma.03G032900 Glycine max HOM05D006102 ORTHO05D007550 4.5e-17 90.9 47 80.9
Nitab4.5_0000859g0180 Nicotiana tabacum HOM05D006102 ORTHO05D007550 4.5e-17 90.9 47 78.7
Nitab4.5_0011151g0030 Nicotiana tabacum HOM05D006102 ORTHO05D007550 4.5e-17 90.9 47 78.7
QL04p037175 Quercus lobata HOM05D006102 ORTHO05D007550 4.5e-17 90.9 47 80.9
arahy.Tifrunner.gnm1.ann1.W52PF9 Arachis hypogaea HOM05D006102 ORTHO05D007550 7.7e-17 90.1 47 78.7
Hund27378 Selenicereus undatus HOM05D006102 ORTHO05D007550 7.7e-17 90.1 49 77.6
Zm00001eb274180 Zea mays HOM05D006102 ORTHO05D007550 7.7e-17 90.1 47 78.7
CAN.G1872.3 Capsicum annuum HOM05D006102 ORTHO05D007550 1.3e-16 89.4 47 76.6
Solyc01g090860.3 Solanum lycopersicum HOM05D006102 ORTHO05D007550 1.3e-16 89.4 47 76.6
Sopen01g036600 Solanum pennellii HOM05D006102 ORTHO05D007550 1.3e-16 89.4 47 76.6
SGA_v2.0_scaffold11G05526 Striga asiatica HOM05D006102 ORTHO05D007550 1.3e-16 89.4 47 78.7
MSTRG.28175 Avicennia marina HOM05D006102 ORTHO05D007550 2.2e-16 88.6 47 80.9
EL10Ac1g00837 Beta vulgaris HOM05D006102 ORTHO05D007550 2.2e-16 88.6 47 78.7
Cfa011148 Carpinus fangiana HOM05D006102 ORTHO05D007550 2.2e-16 88.6 47 78.7
Peaxi162Scf00803g00223 Petunia axillaris HOM05D006102 ORTHO05D007550 2.2e-16 88.6 47 76.6
PGR004G2833 Punica granatum HOM05D006102 ORTHO05D007550 2.2e-16 88.6 47 76.6
ATR0317G095 Amborella trichopoda HOM05D006102 ORTHO05D007550 8.5e-16 86.7 53 66.0
unitig_748.g7113 Utricularia gibba HOM05D006102 ORTHO05D007550 1.5e-15 85.9 47 76.6
Glyma.01G135400 Glycine max HOM05D006102 ORTHO05D007550 2.0e-12 75.5 40 80.0
Mapoly0072s0019 Marchantia polymorpha HOM05D006102 ORTHO05D007550 5.7e-12 73.9 47 61.7
VMungo0331G0964 Vigna mungo HOM05D006102 ORTHO05D007550 9.1e-10 66.6 30 90.0


User provided reference genes

Program Settings