Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 4.8e-188 661.0 329 100.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.2e-90 337.4 326 56.7
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 6.2e-87 325.1 332 53.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.4e-86 323.9 332 53.0
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.0e-85 320.1 334 53.0
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.7e-84 317.0 321 52.3
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.7e-84 317.0 317 54.9
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 3.8e-84 315.8 321 54.5
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 2.1e-82 310.1 324 52.2
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.1e-82 310.1 324 52.5
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.1e-82 310.1 324 52.5
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.3e-81 307.4 315 54.0
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.3e-81 307.4 322 51.2
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 3.0e-81 306.2 338 50.0
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 5.1e-81 305.4 329 50.8
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 8.7e-81 304.7 328 51.5
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.9e-80 303.5 321 51.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.3e-80 302.8 324 50.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 5.7e-80 302.0 338 49.4
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 9.7e-80 301.2 334 50.6
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.3e-79 300.8 330 50.0
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 2.2e-79 300.1 325 50.2
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 4.8e-79 298.9 332 51.2
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 6.3e-79 298.5 328 50.9
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 6.3e-79 298.5 325 51.1
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.4e-78 297.4 337 48.4
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.8e-78 297.0 324 50.6
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.8e-78 297.0 325 50.8
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 2.4e-78 296.6 320 50.6
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 3.1e-78 296.2 327 48.9
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 3.1e-78 296.2 324 48.8
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 4.1e-78 295.8 325 48.9
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 4.1e-78 295.8 338 49.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 6.9e-78 295.0 324 49.1
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 6.9e-78 295.0 324 48.8
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 9.0e-78 294.7 338 48.5
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 9.0e-78 294.7 328 48.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.2e-77 294.3 321 50.5
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.5e-77 293.9 345 46.7
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.5e-77 293.9 329 51.1
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 3.4e-77 292.7 327 49.8
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 3.4e-77 292.7 320 50.9
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 3.4e-77 292.7 333 48.0
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.0e-76 291.2 317 50.2
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 1.3e-76 290.8 339 48.7
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.3e-76 290.8 325 49.8
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 1.7e-76 290.4 328 47.6
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.7e-76 290.4 325 50.5
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 1.7e-76 290.4 313 50.2
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 2.2e-76 290.0 325 50.8
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 2.2e-76 290.0 324 49.7
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 2.9e-76 289.7 325 49.2
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 2.9e-76 289.7 320 49.4
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 3.8e-76 289.3 329 49.5
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 3.8e-76 289.3 332 49.7
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 5.0e-76 288.9 330 49.4
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.1e-75 287.7 325 48.6
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.9e-75 287.0 305 52.8
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 3.2e-75 286.2 340 48.5
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 4.2e-75 285.8 315 50.8
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.5e-75 285.4 333 50.2
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 9.4e-75 284.6 331 49.2
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 9.4e-75 284.6 331 48.9
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 9.4e-75 284.6 324 48.1
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.6e-74 283.9 335 47.8
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.1e-74 283.5 325 49.2
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 4.6e-74 282.3 327 51.1
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 7.9e-74 281.6 318 49.4
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.4e-73 280.8 325 48.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.8e-73 280.4 325 48.0
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 3.9e-73 279.3 335 47.2
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.9e-73 279.3 333 48.0
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 6.7e-73 278.5 337 48.1
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 6.7e-73 278.5 337 48.1
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.5e-72 276.6 334 48.8
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.5e-72 276.6 334 48.8
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 3.3e-72 276.2 335 48.1
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 3.3e-72 276.2 337 46.0
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 7.4e-72 275.0 337 47.2
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 8.2e-71 271.6 286 51.7
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.1e-70 269.6 290 49.3
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 3.1e-70 269.6 325 47.4
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.6e-69 266.5 303 48.5
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 2.6e-69 266.5 318 46.2
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 7.7e-69 265.0 326 45.4
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 3.2e-67 259.6 371 44.7
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.2e-67 259.2 336 45.5
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 9.4e-67 258.1 317 45.1
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.6e-66 257.3 278 50.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.6e-66 256.1 341 46.6
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.3e-65 253.4 346 43.4
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 7.2e-59 231.9 266 46.6
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.6e-58 230.7 331 39.0
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 2.1e-58 230.3 315 45.1
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 3.6e-58 229.6 317 42.3
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 1.4e-54 217.6 344 39.8
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 2.0e-53 213.8 357 36.7
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 3.5e-53 213.0 257 45.5
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 9.4e-51 204.9 334 41.0
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 4.7e-50 202.6 259 44.8
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.8e-49 200.7 332 36.7
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 5.7e-48 195.7 386 32.6
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 3.1e-46 189.9 381 32.3
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.3e-41 173.7 133 66.9
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 3.0e-41 173.3 133 63.9
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 2.2e-39 167.2 132 62.1
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 1.3e-36 157.9 134 59.0
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.2e-32 144.8 134 53.7
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.2e-31 140.6 123 57.7
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.3e-28 131.3 116 56.9
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.1e-26 124.0 105 60.0
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.6e-26 123.2 98 60.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 8.0e-26 122.1 316 29.4
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.4e-24 116.3 121 51.2
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 6.0e-21 105.9 84 57.1
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 2.5e-19 100.5 87 59.8
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 5.2e-17 92.8 104 47.1
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 2.1e-13 80.9 63 57.1
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.5e-13 80.1 61 60.7
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 3.3e-11 73.6 68 52.9
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 4.7e-10 69.7 60 58.3
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 6.8e-09 65.9 101 43.6
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 7.1e-06 55.8 52 50.0


User provided reference genes

Program Settings