Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 2.5e-29 131.3 61 100.0
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 5.1e-27 123.6 60 93.3
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 5.1e-27 123.6 60 93.3
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 6.7e-27 123.2 60 93.3
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 4.3e-26 120.6 60 88.3
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.3e-25 119.0 60 86.7
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.3e-25 119.0 60 88.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 1.6e-25 118.6 60 90.0
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 2.8e-25 117.9 60 88.3
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 2.8e-25 117.9 60 88.3
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 2.8e-25 117.9 60 88.3
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 4.8e-25 117.1 60 86.7
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 4.8e-25 117.1 60 86.7
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 8.2e-25 116.3 60 85.0
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 8.2e-25 116.3 60 86.7
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.1e-24 115.9 60 86.7
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 1.4e-24 115.5 60 85.0
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.4e-24 115.5 60 85.0
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.4e-24 115.5 60 85.0
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.4e-24 115.5 60 85.0
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 2.4e-24 114.8 60 83.3
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.1e-24 114.4 60 83.3
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 3.1e-24 114.4 60 81.7
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.1e-24 114.0 60 81.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 4.1e-24 114.0 60 85.0
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 4.1e-24 114.0 60 85.0
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 4.1e-24 114.0 60 85.0
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 4.1e-24 114.0 60 81.7
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 5.3e-24 113.6 60 85.0
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 5.3e-24 113.6 60 80.0
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 5.3e-24 113.6 60 83.3
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 6.9e-24 113.2 60 83.3
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 6.9e-24 113.2 60 85.0
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 6.9e-24 113.2 60 81.7
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 6.9e-24 113.2 60 85.0
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 6.9e-24 113.2 60 83.3
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 9.0e-24 112.8 60 85.0
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.2e-23 112.5 60 85.0
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.2e-23 112.5 60 83.3
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 80.0
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 83.3
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 85.0
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 81.7
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 83.3
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 83.3
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 80.0
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.5e-23 112.1 60 81.7
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.0e-23 111.7 60 83.3
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 2.0e-23 111.7 60 81.7
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 2.0e-23 111.7 60 80.0
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 2.6e-23 111.3 60 81.7
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.4e-23 110.9 60 83.3
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 3.4e-23 110.9 60 81.7
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 3.4e-23 110.9 60 83.3
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 3.4e-23 110.9 60 80.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 4.5e-23 110.5 60 80.0
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 4.5e-23 110.5 60 78.3
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.5e-23 110.5 60 81.7
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 4.5e-23 110.5 60 81.7
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 81.7
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 81.7
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 81.7
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 81.7
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 83.3
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 80.0
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 80.0
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 5.9e-23 110.2 60 80.0
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 7.6e-23 109.8 60 81.7
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 7.6e-23 109.8 60 78.3
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 80.0
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 81.7
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 81.7
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 81.7
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 80.0
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 83.3
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 80.0
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.0e-22 109.4 60 78.3
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.3e-22 109.0 60 80.0
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.3e-22 109.0 60 78.3
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.7e-22 108.6 60 81.7
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 2.2e-22 108.2 60 81.7
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 2.9e-22 107.8 60 80.0
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 3.8e-22 107.5 60 78.3
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 3.8e-22 107.5 60 80.0
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 5.0e-22 107.1 60 75.0
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 5.0e-22 107.1 60 80.0
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 6.5e-22 106.7 60 80.0
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 6.5e-22 106.7 60 76.7
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 6.5e-22 106.7 60 78.3
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 6.5e-22 106.7 60 80.0
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 8.5e-22 106.3 60 78.3
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 8.5e-22 106.3 60 76.7
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.1e-21 105.9 70 71.4
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.2e-20 102.4 60 70.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.2e-20 102.4 57 78.9
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.0e-19 99.4 54 83.3
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 5.1e-19 97.1 60 71.7
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 4.3e-18 94.0 52 75.0
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 8.2e-17 89.7 44 86.4
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 3.1e-16 87.8 44 84.1
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.1e-16 87.4 60 60.0
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 2.2e-14 81.6 60 60.0
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 5.0e-14 80.5 40 85.0
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.9e-13 78.6 57 59.6
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 8.8e-11 69.7 30 93.3
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.6e-10 68.2 31 87.1
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 9.7e-10 66.2 32 78.1
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 2.4e-08 61.6 42 59.5
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 5.3e-08 60.5 59 45.8
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 9.1e-08 59.7 51 51.0


User provided reference genes

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