Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.0e-71 272.3 138 100.0
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.8e-64 249.2 137 91.2
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.4e-48 196.4 136 72.1
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 2.4e-48 195.7 135 71.9
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 4.1e-48 194.9 136 71.3
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.5e-47 191.8 136 70.6
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.3e-46 189.9 136 68.4
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.7e-46 189.5 136 68.4
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 6.5e-46 187.6 136 67.6
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 1.5e-45 186.4 137 68.6
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 4.2e-45 184.9 136 65.4
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 5.5e-45 184.5 137 64.2
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 7.2e-45 184.1 135 65.2
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 7.2e-45 184.1 135 65.2
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 7.2e-45 184.1 137 64.2
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 9.4e-45 183.7 136 66.9
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.2e-44 183.3 135 64.4
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.6e-44 183.0 135 65.9
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.1e-44 182.6 136 64.7
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 2.1e-44 182.6 135 63.0
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.1e-44 182.6 137 65.7
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 2.1e-44 182.6 135 65.2
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 3.6e-44 181.8 136 66.2
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 4.7e-44 181.4 136 65.4
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 4.7e-44 181.4 136 64.7
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.7e-44 181.4 134 69.4
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.1e-44 181.0 136 65.4
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.1e-44 181.0 136 65.4
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 6.1e-44 181.0 136 67.6
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 6.1e-44 181.0 140 65.7
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 6.1e-44 181.0 137 64.2
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 6.1e-44 181.0 136 66.2
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.0e-43 180.3 136 61.8
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.0e-43 180.3 136 62.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 1.4e-43 179.9 136 65.4
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.8e-43 179.5 136 64.7
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.8e-43 179.5 136 61.8
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 5.2e-43 177.9 136 63.2
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 6.8e-43 177.6 136 63.2
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.6e-42 175.6 136 62.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 2.6e-42 175.6 136 64.0
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 3.4e-42 175.3 137 62.0
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 3.4e-42 175.3 136 60.3
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 7.5e-42 174.1 136 63.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 7.5e-42 174.1 135 65.9
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.3e-41 173.3 136 61.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.3e-41 173.3 136 61.0
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.3e-41 173.3 136 61.0
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 1.3e-41 173.3 135 64.4
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.7e-41 172.9 136 61.0
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 2.2e-41 172.6 136 61.8
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 2.8e-41 172.2 136 61.8
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.7e-41 171.8 136 61.0
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 3.7e-41 171.8 136 59.6
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 4.8e-41 171.4 136 61.0
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 4.8e-41 171.4 136 61.0
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 4.8e-41 171.4 136 61.0
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 6.3e-41 171.0 136 60.3
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 6.3e-41 171.0 153 58.2
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 8.3e-41 170.6 136 60.3
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 8.3e-41 170.6 130 64.6
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.4e-40 169.9 136 58.8
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.4e-40 169.9 136 60.3
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.8e-40 169.5 136 58.8
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.4e-40 169.1 136 58.1
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 2.4e-40 169.1 136 59.6
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.4e-40 169.1 136 61.8
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.1e-40 168.3 132 61.4
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 4.1e-40 168.3 136 58.1
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 7.0e-40 167.5 136 61.0
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 7.0e-40 167.5 137 59.9
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 7.0e-40 167.5 136 60.3
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 9.1e-40 167.2 136 62.5
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 9.1e-40 167.2 136 60.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 1.2e-39 166.8 136 60.3
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.2e-39 166.8 137 57.7
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.2e-39 166.8 137 59.1
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.6e-39 166.4 136 60.3
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.6e-39 166.4 136 58.1
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 1.6e-39 166.4 140 59.3
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.6e-39 166.4 136 59.6
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 2.7e-39 165.6 135 58.5
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.7e-39 165.6 135 58.5
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 2.7e-39 165.6 136 58.1
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.7e-39 165.6 136 57.4
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 3.5e-39 165.2 136 57.4
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 5.9e-39 164.5 137 59.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 5.9e-39 164.5 135 57.8
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.2e-38 162.5 136 56.6
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 5.0e-38 161.4 161 52.2
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 6.5e-38 161.0 136 58.1
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 3.2e-37 158.7 120 67.5
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 3.2e-37 158.7 136 55.1
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 4.2e-37 158.3 136 56.6
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 5.5e-37 157.9 117 67.5
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.2e-36 156.8 137 58.4
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 2.1e-36 156.0 136 56.6
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 2.7e-36 155.6 136 55.1
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 3.6e-36 155.2 130 60.8
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 6.1e-36 154.5 142 54.9
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 6.1e-36 154.5 142 54.2
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.4e-34 148.3 137 54.0
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 9.8e-34 147.1 111 64.9
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.8e-34 147.1 118 61.0
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.8e-33 145.6 136 56.6
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 4.1e-32 141.7 119 55.5
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 4.5e-31 138.3 137 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 3.8e-30 135.2 135 51.1
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.5e-29 133.3 138 49.3
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 7.8e-23 110.9 140 44.3
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 5.8e-18 94.7 86 55.8
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.9e-17 91.7 71 63.4
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 6.4e-17 91.3 88 48.9
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 4.1e-16 88.6 133 42.9
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 5.0e-14 81.6 120 40.8
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.2e-12 77.0 65 61.5
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 1.6e-12 76.6 120 39.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.7e-09 66.6 85 43.5
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 4.9e-09 65.1 46 65.2


User provided reference genes

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