Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015713 Daucus carota HOM05D003104 ORTHO05D003448 4.9e-61 237.7 124 100.0
TAR623G0313 Trochodendron aralioides HOM05D003104 ORTHO05D003448 1.8e-10 69.7 92 44.6
DCAR_029592 Daucus carota HOM05D003104 ORTHO05D003448 2.3e-10 69.3 106 41.5
Lj3g0026667 Lotus japonicus HOM05D003104 ORTHO05D003448 2.6e-09 65.9 118 38.1
Manes.10G152200 Manihot esculenta HOM05D003104 ORTHO05D003448 4.4e-09 65.1 79 50.6
Potri.001G230800 Populus trichocarpa HOM05D003104 ORTHO05D003448 1.3e-08 63.5 82 46.3
Cpa.g.sc189.3 Carica papaya HOM05D003104 ORTHO05D003448 1.7e-08 63.2 57 54.4
Gohir.D01G178500 Gossypium hirsutum HOM05D003104 ORTHO05D003448 4.9e-08 61.6 130 35.4
Gorai.002G224500 Gossypium raimondii HOM05D003104 ORTHO05D003448 4.9e-08 61.6 130 35.4
Lj9P620T33 Lonicera japonica HOM05D003104 ORTHO05D003448 4.9e-08 61.6 128 41.4
Lalb_Chr25g0283651 Lupinus albus HOM05D003104 ORTHO05D003448 6.3e-08 61.2 48 58.3
TWI74G1180 Tripterygium wilfordii HOM05D003104 ORTHO05D003448 6.3e-08 61.2 143 33.6
Aqoxy2G00080 Aquilegia oxysepala HOM05D003104 ORTHO05D003448 8.3e-08 60.8 69 42.0
Oeu024934.1 Olea europaea HOM05D003104 ORTHO05D003448 8.3e-08 60.8 58 56.9
PSO339G2298 Papaver somniferum HOM05D003104 ORTHO05D003448 1.1e-07 60.5 64 45.3
TAR633G0631 Trochodendron aralioides HOM05D003104 ORTHO05D003448 1.1e-07 60.5 87 43.7
TAR633G2208 Trochodendron aralioides HOM05D003104 ORTHO05D003448 1.1e-07 60.5 87 42.5
Dinv43940 Davidia involucrata HOM05D003104 ORTHO05D003448 1.4e-07 60.1 59 52.5
Hma1.2p1_0128F.1_g059810 Hydrangea macrophylla HOM05D003104 ORTHO05D003448 1.8e-07 59.7 88 44.3
Potri.006G192100 Populus trichocarpa HOM05D003104 ORTHO05D003448 1.8e-07 59.7 47 59.6
Prupe.2G002600 Prunus persica HOM05D003104 ORTHO05D003448 1.8e-07 59.7 153 34.6
PGR004G2754 Punica granatum HOM05D003104 ORTHO05D003448 1.8e-07 59.7 75 44.0
VMungo0720G0553 Vigna mungo HOM05D003104 ORTHO05D003448 1.8e-07 59.7 48 56.2
HanXRQChr10g0289851 Helianthus annuus HOM05D003104 ORTHO05D003448 2.4e-07 59.3 79 43.0
Ah.13g075870 Amaranthus hybridus HOM05D003104 ORTHO05D003448 4.1e-07 58.5 88 42.0
Hma1.2p1_0386F.1_g141860 Hydrangea macrophylla HOM05D003104 ORTHO05D003448 4.1e-07 58.5 133 33.1
Nn7g36011 Nelumbo nucifera HOM05D003104 ORTHO05D003448 4.1e-07 58.5 88 39.8
Potri.009G024200 Populus trichocarpa HOM05D003104 ORTHO05D003448 4.1e-07 58.5 62 53.2
Sabra16G0050100 Salix brachista HOM05D003104 ORTHO05D003448 4.1e-07 58.5 49 55.1
Gohir.1Z049368 Gossypium hirsutum HOM05D003104 ORTHO05D003448 5.4e-07 58.2 46 54.3
Nn2g15676 Nelumbo nucifera HOM05D003104 ORTHO05D003448 5.4e-07 58.2 72 41.7
Phvul.007G259600 Phaseolus vulgaris HOM05D003104 ORTHO05D003448 5.4e-07 58.2 68 47.1
THA.LOC104827575 Tarenaya hassleriana HOM05D003104 ORTHO05D003448 5.4e-07 58.2 49 55.1
TWI77G0731 Tripterygium wilfordii HOM05D003104 ORTHO05D003448 5.4e-07 58.2 91 38.5
Lalb_Chr20g0108211 Lupinus albus HOM05D003104 ORTHO05D003448 7.0e-07 57.8 46 56.5
Oeu032786.1 Olea europaea HOM05D003104 ORTHO05D003448 7.0e-07 57.8 58 51.7
QL07p023704 Quercus lobata HOM05D003104 ORTHO05D003448 7.0e-07 57.8 89 41.6
Glyma.09G111800 Glycine max HOM05D003104 ORTHO05D003448 9.2e-07 57.4 48 56.2
Glyma.15G268300 Glycine max HOM05D003104 ORTHO05D003448 9.2e-07 57.4 48 54.2
Gohir.A01G191400 Gossypium hirsutum HOM05D003104 ORTHO05D003448 9.2e-07 57.4 124 33.1
Lj5g0000243 Lotus japonicus HOM05D003104 ORTHO05D003448 9.2e-07 57.4 47 57.4
Medtr2g061720 Medicago truncatula HOM05D003104 ORTHO05D003448 9.2e-07 57.4 65 49.2
Psat6g124440 Pisum sativum HOM05D003104 ORTHO05D003448 9.2e-07 57.4 68 45.6
Sabra09G0015600 Salix brachista HOM05D003104 ORTHO05D003448 9.2e-07 57.4 80 43.8
GSVIVG01001356001 Vitis vinifera HOM05D003104 ORTHO05D003448 9.2e-07 57.4 146 30.1
CAN.G129.49 Capsicum annuum HOM05D003104 ORTHO05D003448 1.2e-06 57.0 51 56.9
COL.COLO4_33986 Corchorus olitorius HOM05D003104 ORTHO05D003448 1.2e-06 57.0 51 52.9
Lsat_1_v5_gn_9_26201 Lactuca sativa HOM05D003104 ORTHO05D003448 1.2e-06 57.0 73 43.8
Oeu060702.1 Olea europaea HOM05D003104 ORTHO05D003448 1.2e-06 57.0 51 56.9
Sabra16G0138200 Salix brachista HOM05D003104 ORTHO05D003448 1.2e-06 57.0 82 43.9
Dinv24074 Davidia involucrata HOM05D003104 ORTHO05D003448 1.6e-06 56.6 72 41.7
PSO384G0475 Papaver somniferum HOM05D003104 ORTHO05D003448 1.6e-06 56.6 56 46.4
Psat1g128960 Pisum sativum HOM05D003104 ORTHO05D003448 1.6e-06 56.6 79 43.0
Sopen01g033330 Solanum pennellii HOM05D003104 ORTHO05D003448 1.6e-06 56.6 45 60.0
PGSC0003DMG400028983 Solanum tuberosum HOM05D003104 ORTHO05D003448 1.6e-06 56.6 45 60.0
Hma1.2p1_0541F.1_g174850 Hydrangea macrophylla HOM05D003104 ORTHO05D003448 2.0e-06 56.2 51 51.0
Manes.09G035200 Manihot esculenta HOM05D003104 ORTHO05D003448 2.0e-06 56.2 56 53.6
SalBow6G3635 Salvia bowleyana HOM05D003104 ORTHO05D003448 2.0e-06 56.2 90 37.8
SalBow6G4220 Salvia bowleyana HOM05D003104 ORTHO05D003448 2.0e-06 56.2 90 37.8
THA.LOC104817149 Tarenaya hassleriana HOM05D003104 ORTHO05D003448 2.0e-06 56.2 50 52.0
Atru.chr11.2705 Acer truncatum HOM05D003104 ORTHO05D003448 2.7e-06 55.8 51 51.0
EL10Ac3g06919 Beta vulgaris HOM05D003104 ORTHO05D003448 2.7e-06 55.8 49 55.1
CSS0036189 Camellia sinensis var. sinensis HOM05D003104 ORTHO05D003448 2.7e-06 55.8 49 53.1
ECA247G3561 Erigeron canadensis HOM05D003104 ORTHO05D003448 2.7e-06 55.8 73 41.1
Glyma.08G157900 Glycine max HOM05D003104 ORTHO05D003448 2.7e-06 55.8 93 36.6
Potri.016G046000 Populus trichocarpa HOM05D003104 ORTHO05D003448 2.7e-06 55.8 49 51.0
TAR636G0094 Trochodendron aralioides HOM05D003104 ORTHO05D003448 2.7e-06 55.8 61 50.8
C08p33570 Brassica napus HOM05D003104 ORTHO05D003448 3.5e-06 55.5 49 53.1
Prupe.7G076600 Prunus persica HOM05D003104 ORTHO05D003448 3.5e-06 55.5 81 44.4
AL4G43320 Arabidopsis lyrata HOM05D003104 ORTHO05D003448 4.5e-06 55.1 90 35.6
AT2G44340 Arabidopsis thaliana HOM05D003104 ORTHO05D003448 4.5e-06 55.1 71 40.8
A09p50830 Brassica napus HOM05D003104 ORTHO05D003448 4.5e-06 55.1 49 53.1
BraA09t40529Z Brassica rapa HOM05D003104 ORTHO05D003448 4.5e-06 55.1 49 53.1
Ciclev10013474m.g Citrus clementina HOM05D003104 ORTHO05D003448 4.5e-06 55.1 102 37.3
Hma1.2p1_0676F.1_g201970 Hydrangea macrophylla HOM05D003104 ORTHO05D003448 4.5e-06 55.1 70 40.0
Phvul.005G042100 Phaseolus vulgaris HOM05D003104 ORTHO05D003448 4.5e-06 55.1 117 34.2
QL04p001561 Quercus lobata HOM05D003104 ORTHO05D003448 4.5e-06 55.1 55 47.3
Thecc.05G171100 Theobroma cacao HOM05D003104 ORTHO05D003448 4.5e-06 55.1 94 42.6
TPR.G16156 Trifolium pratense HOM05D003104 ORTHO05D003448 4.5e-06 55.1 49 51.0
vmacro07909 Vaccinium macrocarpon HOM05D003104 ORTHO05D003448 4.5e-06 55.1 71 45.1
A04p02800 Brassica napus HOM05D003104 ORTHO05D003448 5.9e-06 54.7 49 53.1
BolC8t50952H Brassica oleracea HOM05D003104 ORTHO05D003448 5.9e-06 54.7 84 36.9
CARHR139500 Cardamine hirsuta HOM05D003104 ORTHO05D003448 5.9e-06 54.7 89 36.0
Duzib128G0074 Durio zibethinus HOM05D003104 ORTHO05D003448 5.9e-06 54.7 51 51.0
MBI04_g33964_MAGBIO Magnolia biondii HOM05D003104 ORTHO05D003448 5.9e-06 54.7 48 50.0
A04p33260 Brassica napus HOM05D003104 ORTHO05D003448 7.7e-06 54.3 53 45.3
BraA04t18787Z Brassica rapa HOM05D003104 ORTHO05D003448 7.7e-06 54.3 53 45.3
Dinv14298 Davidia involucrata HOM05D003104 ORTHO05D003448 7.7e-06 54.3 103 35.0
Migut.N01656 Erythranthe guttata HOM05D003104 ORTHO05D003448 7.7e-06 54.3 78 38.5
Thhalv10017963m.g Eutrema salsugineum HOM05D003104 ORTHO05D003448 7.7e-06 54.3 50 52.0
RcHm_v2.0_Chr3g0479721 Rosa chinensis HOM05D003104 ORTHO05D003448 7.7e-06 54.3 112 35.7
PGSC0003DMG400023709 Solanum tuberosum HOM05D003104 ORTHO05D003448 7.7e-06 54.3 40 57.5


User provided reference genes

Program Settings