Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015449 Daucus carota HOM05D004233 ORTHO05D003507 9.6e-60 233.4 128 100.0
DCAR_018722 Daucus carota HOM05D004233 ORTHO05D003507 6.3e-27 124.4 137 62.0
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 5.5e-15 84.7 127 50.4
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 7.2e-15 84.3 127 50.4
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 7.2e-15 84.3 127 50.4
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 1.6e-14 83.2 128 49.2
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 3.6e-14 82.0 128 47.7
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 1.0e-13 80.5 128 47.7
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 1.0e-13 80.5 128 46.9
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 1.4e-13 80.1 130 48.5
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.0e-13 79.0 76 61.8
Oeu030524.1 Olea europaea HOM05D004233 ORTHO05D003507 3.0e-13 79.0 129 45.7
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.0e-13 78.6 76 61.8
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.0e-13 78.6 76 61.8
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 6.8e-13 77.8 137 48.2
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 8.8e-13 77.4 76 60.5
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 8.8e-13 77.4 130 46.9
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 2.0e-12 76.3 131 48.1
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 2.0e-12 76.3 131 47.3
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 4.4e-12 75.1 130 45.4
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 1.7e-11 73.2 122 49.2
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 1.7e-11 73.2 70 62.9
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 3.7e-11 72.0 76 60.5
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 3.7e-11 72.0 129 43.4
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 4.8e-11 71.6 70 64.3
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 6.3e-11 71.2 133 45.9
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 8.3e-11 70.9 129 45.0
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 8.3e-11 70.9 130 44.6
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 1.8e-10 69.7 128 42.2
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 2.4e-10 69.3 137 44.5
DCAR_028820 Daucus carota HOM05D004233 ORTHO05D003507 2.4e-10 69.3 132 42.4
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 4.1e-10 68.6 131 45.0
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 5.4e-10 68.2 129 43.4
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 5.4e-10 68.2 130 45.4
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 7.0e-10 67.8 128 41.4
RcHm_v2.0_Chr3g0463681 Rosa chinensis HOM05D004233 ORTHO05D003507 7.0e-10 67.8 128 41.4
Gohir.D04G129214 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.2e-09 67.0 77 55.8
Gorai.012G112300 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.2e-09 67.0 77 55.8
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 2.7e-09 65.9 74 54.1
Sed0017480 Sechium edule HOM05D004233 ORTHO05D003507 2.7e-09 65.9 83 49.4
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 3.5e-09 65.5 78 59.0
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 4.5e-09 65.1 74 54.1
Gohir.A04G088850 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.5e-09 65.1 77 54.5
FAN05G3657 Fragaria x ananassa HOM05D004233 ORTHO05D003507 5.9e-09 64.7 130 40.0
FAN09G0897 Fragaria x ananassa HOM05D004233 ORTHO05D003507 5.9e-09 64.7 130 40.8
Sopen09g007170 Solanum pennellii HOM05D004233 ORTHO05D003507 5.9e-09 64.7 138 39.9
FvH4_6g11920 Fragaria vesca HOM05D004233 ORTHO05D003507 7.7e-09 64.3 130 40.8
FAN02G0664 Fragaria x ananassa HOM05D004233 ORTHO05D003507 7.7e-09 64.3 135 39.3
FAN14G3430 Fragaria x ananassa HOM05D004233 ORTHO05D003507 7.7e-09 64.3 130 40.8
FAN14G4547 Fragaria x ananassa HOM05D004233 ORTHO05D003507 7.7e-09 64.3 130 40.8
Oeu024626.1 Olea europaea HOM05D004233 ORTHO05D003507 7.7e-09 64.3 86 51.2
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 1.0e-08 63.9 133 42.1
CARHR211560 Cardamine hirsuta HOM05D004233 ORTHO05D003507 1.3e-08 63.5 136 39.7
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.3e-08 63.5 74 52.7
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 1.7e-08 63.2 74 54.1
SalBow4G0303 Salvia bowleyana HOM05D004233 ORTHO05D003507 2.9e-08 62.4 72 58.3
Oeu055173.1 Olea europaea HOM05D004233 ORTHO05D003507 3.8e-08 62.0 74 52.7
THA.LOC104823286 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 3.8e-08 62.0 136 42.6
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 3.8e-08 62.0 130 40.8
SalBow4G1886 Salvia bowleyana HOM05D004233 ORTHO05D003507 6.5e-08 61.2 70 58.6
DCAR_024028 Daucus carota HOM05D004233 ORTHO05D003507 1.1e-07 60.5 62 67.7
PGR004G1616 Punica granatum HOM05D004233 ORTHO05D003507 1.1e-07 60.5 131 38.9
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 1.5e-07 60.1 120 40.8
MD12G1161500 Malus domestica HOM05D004233 ORTHO05D003507 2.5e-07 59.3 72 52.8
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 2.5e-07 59.3 96 42.7
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 3.2e-07 58.9 120 40.8
CANSAT35G0502 Cannabis sativa HOM05D004233 ORTHO05D003507 4.2e-07 58.5 78 51.3
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 4.2e-07 58.5 120 41.7
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 5.5e-07 58.2 128 40.6
Lalb_Chr03g0043081 Lupinus albus HOM05D004233 ORTHO05D003507 5.5e-07 58.2 62 61.3
Medtr2g013470 Medicago truncatula HOM05D004233 ORTHO05D003507 5.5e-07 58.2 126 40.5
CARHR083380 Cardamine hirsuta HOM05D004233 ORTHO05D003507 7.2e-07 57.8 140 38.6
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 9.4e-07 57.4 120 36.7
Glyma.15G073400 Glycine max HOM05D004233 ORTHO05D003507 2.1e-06 56.2 122 43.4
Medtr7g067365 Medicago truncatula HOM05D004233 ORTHO05D003507 2.1e-06 56.2 63 60.3
Psat3g130680 Pisum sativum HOM05D004233 ORTHO05D003507 2.1e-06 56.2 63 58.7
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 2.1e-06 56.2 131 38.9
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 2.7e-06 55.8 69 49.3
THA.LOC104816214 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 2.7e-06 55.8 140 38.6
AL3G20070 Arabidopsis lyrata HOM05D004233 ORTHO05D003507 3.6e-06 55.5 140 37.9
Thhalv10014915m.g Eutrema salsugineum HOM05D004233 ORTHO05D003507 4.7e-06 55.1 152 38.2
Lsat_1_v5_gn_9_35941 Lactuca sativa HOM05D004233 ORTHO05D003507 4.7e-06 55.1 131 38.2
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 4.7e-06 55.1 74 50.0
TPR.G1552 Trifolium pratense HOM05D004233 ORTHO05D003507 4.7e-06 55.1 63 57.1
CsaV3_3G034080 Cucumis sativus L. HOM05D004233 ORTHO05D003507 6.1e-06 54.7 128 37.5
Migut.N00891 Erythranthe guttata HOM05D004233 ORTHO05D003507 6.1e-06 54.7 114 40.4
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 8.0e-06 54.3 73 49.3
Oeu045519.1 Olea europaea HOM05D004233 ORTHO05D003507 8.0e-06 54.3 111 36.9
PSO339G4028 Papaver somniferum HOM05D004233 ORTHO05D003507 8.0e-06 54.3 155 34.8
Phvul.006G186000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 8.0e-06 54.3 130 41.5


User provided reference genes

Program Settings