Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 9.5e-80 300.1 145 100.0
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 4.1e-59 231.5 134 82.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.3e-57 226.5 134 76.9
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.7e-57 226.1 136 77.2
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 2.5e-56 222.2 134 75.4
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.3e-56 221.9 134 76.9
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 7.3e-56 220.7 134 76.1
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 7.3e-56 220.7 134 76.1
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 7.3e-56 220.7 134 76.1
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.2e-55 219.9 134 76.9
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 2.1e-55 219.2 137 73.7
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 2.8e-55 218.8 136 75.0
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 2.8e-55 218.8 136 75.7
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 3.6e-55 218.4 134 75.4
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 3.6e-55 218.4 134 74.6
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 4.7e-55 218.0 134 74.6
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 6.2e-55 217.6 136 74.3
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 6.2e-55 217.6 135 74.1
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 8.1e-55 217.2 134 76.1
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 1.1e-54 216.9 134 73.9
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 1.1e-54 216.9 136 75.0
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 1.4e-54 216.5 134 73.9
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.8e-54 216.1 136 73.5
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 2.4e-54 215.7 134 74.6
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.0e-54 214.9 136 74.3
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 5.2e-54 214.5 137 73.7
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.8e-54 214.2 136 74.3
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 8.9e-54 213.8 136 72.8
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.2e-53 213.4 137 73.7
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 2.0e-53 212.6 136 72.1
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.0e-53 212.6 135 77.0
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 2.6e-53 212.2 134 74.6
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 2.6e-53 212.2 136 72.8
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.6e-53 212.2 134 74.6
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 4.4e-53 211.5 136 75.0
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 5.8e-53 211.1 134 74.6
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.3e-52 209.9 137 73.0
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.3e-52 209.9 137 72.3
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 1.7e-52 209.5 137 73.0
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.7e-52 209.5 135 73.3
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.7e-52 209.5 134 72.4
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.2e-52 209.1 134 75.4
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.9e-52 208.8 134 74.6
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 2.9e-52 208.8 134 70.1
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 3.8e-52 208.4 136 72.8
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 8.4e-52 207.2 136 72.1
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 8.4e-52 207.2 136 72.1
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 8.4e-52 207.2 141 69.5
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 8.4e-52 207.2 134 73.9
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.1e-51 206.8 136 72.8
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.1e-51 206.8 136 74.3
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 1.9e-51 206.1 136 72.8
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 2.4e-51 205.7 136 73.5
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 2.4e-51 205.7 139 72.7
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 4.1e-51 204.9 140 72.1
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 4.1e-51 204.9 136 72.1
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 5.4e-51 204.5 153 64.7
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.2e-50 203.4 137 70.8
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.6e-50 203.0 134 70.9
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.1e-50 202.6 136 72.1
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 3.5e-50 201.8 134 69.4
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 4.6e-50 201.4 138 70.3
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 4.6e-50 201.4 136 70.6
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 6.0e-50 201.1 136 72.8
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 7.8e-50 200.7 138 68.8
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 1.0e-49 200.3 136 71.3
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 1.0e-49 200.3 136 72.8
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 1.3e-49 199.9 116 75.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 1.7e-49 199.5 138 66.7
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.7e-49 199.5 138 69.6
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 2.3e-49 199.1 137 70.8
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 2.3e-49 199.1 136 72.1
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 5.1e-49 198.0 144 68.8
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 6.6e-49 197.6 136 70.6
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 8.7e-49 197.2 136 71.3
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.1e-48 196.8 148 67.6
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 9.6e-48 193.7 136 67.6
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.1e-46 190.3 135 66.7
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.2e-45 186.8 136 67.6
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 9.9e-45 183.7 137 65.0
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 2.9e-44 182.2 134 67.2
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 3.2e-43 178.7 137 62.0
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 4.2e-43 178.3 136 65.4
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.6e-42 176.4 136 64.0
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 2.7e-42 175.6 136 63.2
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.0e-41 173.7 140 58.6
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.9e-40 169.5 141 60.3
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 5.6e-40 167.9 132 63.6
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.8e-39 165.6 94 79.8
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 2.0e-37 159.5 144 53.5
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 5.8e-37 157.9 144 53.5
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 9.9e-37 157.1 106 67.9
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 2.2e-36 156.0 136 58.1
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 5.4e-35 151.4 190 42.6
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 7.1e-35 151.0 136 55.9
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 9.6e-32 140.6 85 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 8.1e-31 137.5 96 64.6
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 1.2e-29 133.7 134 53.0
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.5e-29 133.3 87 74.7
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 7.6e-29 131.0 93 68.8
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 9.6e-24 114.0 192 41.1
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.1e-22 110.5 85 60.0


User provided reference genes

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