Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015416 Daucus carota HOM05D002889 ORTHO05D045050 1.0e-215 753.1 371 100.0
DCAR_012606 Daucus carota HOM05D002889 ORTHO05D045050 2.4e-172 609.0 531 63.3
DCAR_012623 Daucus carota HOM05D002889 ORTHO05D003366 1.2e-33 148.3 123 68.3
Glyma.19G171200 Glycine max HOM05D002889 ORTHO05D003366 5.5e-31 139.4 123 63.4
TPR.G7556 Trifolium pratense HOM05D002889 ORTHO05D003366 5.5e-31 139.4 123 62.6
VMungo1383G1051 Vigna mungo HOM05D002889 ORTHO05D003366 5.5e-31 139.4 123 63.4
Glyma.03G170000 Glycine max HOM05D002889 ORTHO05D003366 7.2e-31 139.0 123 63.4
Phvul.001G168400 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 7.2e-31 139.0 123 62.6
Ca_08769_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 1.6e-30 137.9 123 62.6
DCAR_018539 Daucus carota HOM05D002889 ORTHO05D003366 1.6e-30 137.9 123 63.4
arahy.Tifrunner.gnm1.ann1.EIAU9G Arachis hypogaea HOM05D002889 ORTHO05D003366 2.1e-30 137.5 123 61.8
arahy.Tifrunner.gnm1.ann1.PFSA3S Arachis hypogaea HOM05D002889 ORTHO05D003366 2.1e-30 137.5 123 61.8
Lalb_Chr25g0289711 Lupinus albus HOM05D002889 ORTHO05D003366 2.1e-30 137.5 123 62.6
Oeu017344.1 Olea europaea HOM05D002889 ORTHO05D003366 2.1e-30 137.5 123 62.6
Lj1g0020070 Lotus japonicus HOM05D002889 ORTHO05D003366 3.6e-30 136.7 123 61.8
MD05G1182800 Malus domestica HOM05D002889 ORTHO05D003366 4.6e-30 136.3 123 62.6
Prupe.8G209400 Prunus persica HOM05D002889 ORTHO05D003366 4.6e-30 136.3 123 62.6
Lj1A81G48 Lonicera japonica HOM05D002889 ORTHO05D003366 6.1e-30 136.0 123 62.6
Lj2C1137G6 Lonicera japonica HOM05D002889 ORTHO05D003366 6.1e-30 136.0 123 61.8
Rhsim13G0041900 Rhododendron simsii HOM05D002889 ORTHO05D003366 6.1e-30 136.0 123 63.4
Dinv19241 Davidia involucrata HOM05D002889 ORTHO05D003366 7.9e-30 135.6 123 61.8
Medtr7g099480 Medicago truncatula HOM05D002889 ORTHO05D003366 7.9e-30 135.6 123 61.8
GSVIVG01028491001 Vitis vinifera HOM05D002889 ORTHO05D003366 7.9e-30 135.6 123 61.0
vmacro02730 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 1.0e-29 135.2 123 62.6
TAR636G2078 Trochodendron aralioides HOM05D002889 ORTHO05D003366 1.3e-29 134.8 123 61.8
Atru.chr5.1927 Acer truncatum HOM05D002889 ORTHO05D003366 2.3e-29 134.0 123 61.0
MD10G1170900 Malus domestica HOM05D002889 ORTHO05D003366 2.3e-29 134.0 123 61.0
Potri.002G253200 Populus trichocarpa HOM05D002889 ORTHO05D003366 2.3e-29 134.0 123 61.0
Nn1g03087 Nelumbo nucifera HOM05D002889 ORTHO05D003366 3.0e-29 133.7 123 61.0
Hund05497 Selenicereus undatus HOM05D002889 ORTHO05D003366 3.0e-29 133.7 123 61.0
TAR365G1138 Trochodendron aralioides HOM05D002889 ORTHO05D003366 3.0e-29 133.7 123 61.0
Migut.N02247 Erythranthe guttata HOM05D002889 ORTHO05D003366 3.9e-29 133.3 123 60.2
Nitab4.5_0002727g0040 Nicotiana tabacum HOM05D002889 ORTHO05D003366 3.9e-29 133.3 123 61.0
Psat3g050160 Pisum sativum HOM05D002889 ORTHO05D003366 3.9e-29 133.3 123 60.2
vmacro14774 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 3.9e-29 133.3 123 61.0
Actinidia37570 Actinidia chinensis HOM05D002889 ORTHO05D003366 5.1e-29 132.9 123 61.0
MSTRG.17535 Avicennia marina HOM05D002889 ORTHO05D003366 5.1e-29 132.9 123 60.2
Peaxi162Scf00052g02011 Petunia axillaris HOM05D002889 ORTHO05D003366 5.1e-29 132.9 123 61.0
Psat6g064880 Pisum sativum HOM05D002889 ORTHO05D003366 5.1e-29 132.9 123 60.2
TAR362G1318 Trochodendron aralioides HOM05D002889 ORTHO05D003366 5.1e-29 132.9 123 61.0
AUR62008857 Chenopodium quinoa HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 59.3
Ca_09624_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 60.2
Ciclev10018498m.g Citrus clementina HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 60.2
Cc01_g17450 Coffea canephora HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 61.0
Medtr1g069165 Medicago truncatula HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 60.2
Nn3g19858 Nelumbo nucifera HOM05D002889 ORTHO05D003366 6.7e-29 132.5 124 59.7
Nitab4.5_0000813g0100 Nicotiana tabacum HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 61.0
Solyc09g063030.4 Solanum lycopersicum HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 60.2
Sopen09g025200 Solanum pennellii HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 60.2
SGA_v2.0_scaffold3G01589 Striga asiatica HOM05D002889 ORTHO05D003366 6.7e-29 132.5 123 61.0
EL10Ac7g17762 Beta vulgaris HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 59.3
FvH4_2g19850 Fragaria vesca HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 61.0
FAN15G1177 Fragaria x ananassa HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 61.0
FAN24G0698 Fragaria x ananassa HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 61.0
FAN27G1075 Fragaria x ananassa HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 61.0
Nitab4.5_0003180g0050 Nicotiana tabacum HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 60.2
Sabra02G0192400 Salix brachista HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 60.2
TWI14G1217 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 8.7e-29 132.1 123 60.2
PGR044G2403 Punica granatum HOM05D002889 ORTHO05D003366 1.1e-28 131.7 123 60.2
CAN.G503.27 Capsicum annuum HOM05D002889 ORTHO05D003366 1.5e-28 131.3 123 60.2
AUR62025387 Chenopodium quinoa HOM05D002889 ORTHO05D003366 1.5e-28 131.3 123 58.5
Lsat_1_v5_gn_9_11241 Lactuca sativa HOM05D002889 ORTHO05D003366 1.5e-28 131.3 123 60.2
TPR.G35800 Trifolium pratense HOM05D002889 ORTHO05D003366 1.5e-28 131.3 123 59.3
Ah.08g213900 Amaranthus hybridus HOM05D002889 ORTHO05D003366 1.9e-28 131.0 123 59.3
CSS0022688 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D003366 1.9e-28 131.0 123 60.2
Lj5g0008167 Lotus japonicus HOM05D002889 ORTHO05D003366 1.9e-28 131.0 123 59.3
MSTRG.12505 Avicennia marina HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 59.3
Haze_24745 Corylus avellana HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 59.3
Duzib133G1137 Durio zibethinus HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 60.2
Duzib138G1300 Durio zibethinus HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 60.2
Eucgr.K03590 Eucalyptus grandis HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 59.3
Gohir.A07G202300 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 60.2
Gorai.001G235400 Gossypium raimondii HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 60.2
RcHm_v2.0_Chr6g0285551 Rosa chinensis HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 59.3
Thecc.01G236600 Theobroma cacao HOM05D002889 ORTHO05D003366 2.5e-28 130.6 123 60.2
Aqoxy5G00053 Aquilegia oxysepala HOM05D002889 ORTHO05D003366 3.3e-28 130.2 123 57.7
TWI23G0798 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 4.3e-28 129.8 123 59.3
Cfa002518 Carpinus fangiana HOM05D002889 ORTHO05D003366 5.7e-28 129.4 123 58.5
CiPaw.03G153400 Carya illinoinensis HOM05D002889 ORTHO05D003366 5.7e-28 129.4 123 57.7
Dinv43034 Davidia involucrata HOM05D002889 ORTHO05D003366 5.7e-28 129.4 123 59.3
Peaxi162Scf00499g00610 Petunia axillaris HOM05D002889 ORTHO05D003366 5.7e-28 129.4 123 60.2
BcaC04g22811 Brassica carinata HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
A07p00540 Brassica napus HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
A09p12740 Brassica napus HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
C07p00990 Brassica napus HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
C09p15080 Brassica napus HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
BolC7t40536H Brassica oleracea HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
BolC9t54414H Brassica oleracea HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
BraA07t27848Z Brassica rapa HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
Gohir.D07G208500 Gossypium hirsutum HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
THA.LOC104820061 Tarenaya hassleriana HOM05D002889 ORTHO05D003366 7.4e-28 129.0 123 59.3
Actinidia09497 Actinidia chinensis HOM05D002889 ORTHO05D003366 9.7e-28 128.6 118 60.2
Aa31LG8G17120 Aethionema arabicum HOM05D002889 ORTHO05D003366 9.7e-28 128.6 123 59.3
ECA236G1707 Erigeron canadensis HOM05D002889 ORTHO05D003366 9.7e-28 128.6 123 59.3
Gohir.A08G192800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 9.7e-28 128.6 123 58.5
MBI10_g16806_MAGBIO Magnolia biondii HOM05D002889 ORTHO05D003366 9.7e-28 128.6 124 58.9
Oeu015449.1 Olea europaea HOM05D002889 ORTHO05D003366 9.7e-28 128.6 123 59.3
SalBow6G0687 Salvia bowleyana HOM05D002889 ORTHO05D003366 9.7e-28 128.6 123 60.2
Glyma.13G130000 Glycine max HOM05D002889 ORTHO05D003366 1.3e-27 128.3 123 57.7
Manes.12G044400 Manihot esculenta HOM05D002889 ORTHO05D003366 1.3e-27 128.3 123 58.5
Sed0016475 Sechium edule HOM05D002889 ORTHO05D003366 1.3e-27 128.3 123 58.5
AT2G20190 Arabidopsis thaliana HOM05D002889 ORTHO05D003366 1.6e-27 127.9 123 58.5
BcaB03g16811 Brassica carinata HOM05D002889 ORTHO05D003366 1.6e-27 127.9 123 58.5
BcaNung04093 Brassica carinata HOM05D002889 ORTHO05D003366 1.6e-27 127.9 123 58.5
BraA09t36918Z Brassica rapa HOM05D002889 ORTHO05D003366 1.6e-27 127.9 123 58.5
Gohir.D08G210800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 1.6e-27 127.9 123 58.5
Glyma.19G060900 Glycine max HOM05D002889 ORTHO05D003366 2.2e-27 127.5 123 57.7
Gohir.A07G154000 Gossypium hirsutum HOM05D002889 ORTHO05D003366 2.2e-27 127.5 123 58.5
Gorai.004G223500 Gossypium raimondii HOM05D002889 ORTHO05D003366 2.2e-27 127.5 123 58.5
Carub.0003s3449 Capsella rubella HOM05D002889 ORTHO05D003366 2.8e-27 127.1 123 58.5
CARHR110690 Cardamine hirsuta HOM05D002889 ORTHO05D003366 2.8e-27 127.1 123 58.5
Thhalv10001879m.g Eutrema salsugineum HOM05D002889 ORTHO05D003366 2.8e-27 127.1 123 58.5
Sp3g33430 Schrenkiella parvula HOM05D002889 ORTHO05D003366 2.8e-27 127.1 123 58.5
Sed0001453 Sechium edule HOM05D002889 ORTHO05D003366 2.8e-27 127.1 123 57.7
HanXRQChr10g0287251 Helianthus annuus HOM05D002889 ORTHO05D003366 3.7e-27 126.7 123 57.7
Lsat_1_v5_gn_8_90261 Lactuca sativa HOM05D002889 ORTHO05D003366 3.7e-27 126.7 123 57.7
Rhsim01G0258400 Rhododendron simsii HOM05D002889 ORTHO05D003366 3.7e-27 126.7 123 58.5
ClCG09G009410 Citrullus lanatus HOM05D002889 ORTHO05D003366 4.8e-27 126.3 123 57.7
Oeu039639.1 Olea europaea HOM05D002889 ORTHO05D003366 4.8e-27 126.3 111 64.9
AL3G47890 Arabidopsis lyrata HOM05D002889 ORTHO05D003366 6.3e-27 125.9 123 58.5
Solyc06g008040.3 Solanum lycopersicum HOM05D002889 ORTHO05D003366 6.3e-27 125.9 123 57.7
Sopen06g002880 Solanum pennellii HOM05D002889 ORTHO05D003366 6.3e-27 125.9 123 57.7
Glyma.10G042600 Glycine max HOM05D002889 ORTHO05D003366 8.2e-27 125.6 123 56.9
HanXRQChr13g0409041 Helianthus annuus HOM05D002889 ORTHO05D003366 8.2e-27 125.6 123 56.9
QL09p043970 Quercus lobata HOM05D002889 ORTHO05D003366 8.2e-27 125.6 124 58.1
VMungo0720G0228 Vigna mungo HOM05D002889 ORTHO05D003366 8.2e-27 125.6 123 56.1
CiPaw.04G108600 Carya illinoinensis HOM05D002889 ORTHO05D003366 1.1e-26 125.2 123 56.1
MELO3C024150.2 Cucumis melo HOM05D002889 ORTHO05D003366 1.1e-26 125.2 123 56.9
CsaV3_7G025450 Cucumis sativus L. HOM05D002889 ORTHO05D003366 1.1e-26 125.2 123 56.9
Manes.13G042800 Manihot esculenta HOM05D002889 ORTHO05D003366 1.1e-26 125.2 123 57.7
CDE09G0867 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 1.4e-26 124.8 123 56.9
Gohir.D07G160200 Gossypium hirsutum HOM05D002889 ORTHO05D003366 1.4e-26 124.8 123 57.7
Hund18347 Selenicereus undatus HOM05D002889 ORTHO05D003366 1.4e-26 124.8 124 58.1
SGA_v2.0_scaffold42G16158 Striga asiatica HOM05D002889 ORTHO05D003366 1.4e-26 124.8 123 57.7
Gorai.001G183300 Gossypium raimondii HOM05D002889 ORTHO05D003366 1.8e-26 124.4 123 57.7
Phvul.007G156100 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 3.1e-26 123.6 123 55.3
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 3.1e-26 123.6 111 64.0
unitig_899.g15235 Utricularia gibba HOM05D002889 ORTHO05D003366 3.1e-26 123.6 111 63.1
Eucgr.H00823 Eucalyptus grandis HOM05D002889 ORTHO05D003366 4.1e-26 123.2 123 57.7
FAN09G3985 Fragaria x ananassa HOM05D002889 ORTHO05D003366 4.1e-26 123.2 114 61.4
FAN21G2147 Fragaria x ananassa HOM05D002889 ORTHO05D003366 4.1e-26 123.2 114 61.4
Cpa.g.sc8.204 Carica papaya HOM05D002889 ORTHO05D003366 6.9e-26 122.5 123 57.7
PSO170G4103 Papaver somniferum HOM05D002889 ORTHO05D003366 6.9e-26 122.5 123 55.3
CAN.G941.45 Capsicum annuum HOM05D002889 ORTHO05D003366 9.1e-26 122.1 123 55.3
Lalb_Chr02g0152941 Lupinus albus HOM05D002889 ORTHO05D003366 9.1e-26 122.1 123 56.9
SEGI_29841 Sequoiadendron giganteum HOM05D002889 ORTHO05D003366 1.5e-25 121.3 123 54.5
arahy.Tifrunner.gnm1.ann1.73DRY2 Arachis hypogaea HOM05D002889 ORTHO05D003366 2.0e-25 120.9 130 54.6
arahy.Tifrunner.gnm1.ann1.CB4TML Arachis hypogaea HOM05D002889 ORTHO05D003366 2.0e-25 120.9 130 54.6
PSO764G0331 Papaver somniferum HOM05D002889 ORTHO05D003366 2.0e-25 120.9 123 54.5
PGR083G0457 Punica granatum HOM05D002889 ORTHO05D003366 1.7e-24 117.9 123 54.5
ATR0787G124 Amborella trichopoda HOM05D002889 ORTHO05D003366 2.9e-24 117.1 123 53.7
HPP92_027293 Vanilla planifolia HOM05D002889 ORTHO05D003366 1.4e-23 114.8 117 53.8
AagrBONN_evm.TU.Sc2ySwM_228.3600 Anthoceros agrestis HOM05D002889 ORTHO05D003366 3.2e-23 113.6 123 53.7
Os02g0617300 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 7.2e-23 112.5 124 51.6
Mapoly0066s0036 Marchantia polymorpha HOM05D002889 ORTHO05D003366 9.4e-23 112.1 123 51.2
Zm00001eb077900 Zea mays HOM05D002889 ORTHO05D003366 1.2e-22 111.7 124 50.0
Zm00001eb426220 Zea mays HOM05D002889 ORTHO05D003366 1.2e-22 111.7 124 50.0
Os04g0507500 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 6.1e-22 109.4 125 48.8
Pp3c8_18290 Physcomitrium patens HOM05D002889 ORTHO05D003366 7.9e-22 109.0 123 50.4
SHI47266 Sapria himalayana HOM05D002889 ORTHO05D003366 1.4e-21 108.2 123 49.6
CDE02G3724 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 3.0e-21 107.1 123 49.6
Pp3c24_11460 Physcomitrium patens HOM05D002889 ORTHO05D003366 3.0e-21 107.1 123 49.6
Pp3c3_31820 Physcomitrium patens HOM05D002889 ORTHO05D003366 3.9e-21 106.7 123 48.8
SMO358G0024 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 4.4e-20 103.2 123 49.6
BcaC06g36696 Brassica carinata HOM05D002889 ORTHO05D003366 7.4e-20 102.4 98 60.2
Hma1.2p1_1018F.1_g248420 Hydrangea macrophylla HOM05D002889 ORTHO05D003366 2.6e-17 94.0 96 56.2
unitig_746.g26747 Utricularia gibba HOM05D002889 ORTHO05D003366 3.4e-17 93.6 79 68.4
Lalb_Chr20g0113361 Lupinus albus HOM05D002889 ORTHO05D003366 4.5e-17 93.2 123 48.8
Duzib212G0822 Durio zibethinus HOM05D002889 ORTHO05D003366 1.0e-16 92.0 124 46.8
COL.COLO4_05728 Corchorus olitorius HOM05D002889 ORTHO05D003366 1.3e-16 91.7 124 46.0
Gorai.006G054600 Gossypium raimondii HOM05D002889 ORTHO05D003366 8.5e-16 89.0 126 46.0
SMO235G0068 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 4.8e-11 73.2 111 37.8
CDE08G0296 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 5.3e-10 69.7 107 43.0
AagrBONN_evm.TU.Sc2ySwM_344.3270 Anthoceros agrestis HOM05D002889 ORTHO05D003366 4.5e-09 66.6 98 41.8
AUR62018835 Chenopodium quinoa HOM05D000007 ORTHO05D000017 2.2e-08 64.3 122 33.6
Zm00001eb116890 Zea mays HOM05D002889 ORTHO05D003366 2.9e-08 63.9 77 44.2
SMO308G0007 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 1.6e-06 58.2 62 54.8


User provided reference genes

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