Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015307 Daucus carota HOM05D000336 ORTHO05D002705 6.6e-48 193.7 100 100.0
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 7.1e-26 120.6 96 63.5
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 1.3e-24 116.3 90 66.7
Haze_16925 Corylus avellana HOM05D000336 ORTHO05D002705 1.9e-23 112.5 93 59.1
Glyma.17G182700 Glycine max HOM05D000336 ORTHO05D002705 4.3e-23 111.3 90 58.9
CSS0015604 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 1.3e-22 109.8 96 59.4
Eucgr.J01109 Eucalyptus grandis HOM05D000336 ORTHO05D002705 1.6e-22 109.4 97 58.8
Sopen09g009860 Solanum pennellii HOM05D000336 ORTHO05D002705 4.8e-22 107.8 90 63.3
MD01G1111300 Malus domestica HOM05D000336 ORTHO05D002705 1.1e-21 106.7 93 57.0
Dinv29831 Davidia involucrata HOM05D002401 ORTHO05D006143 1.4e-21 106.3 97 57.7
Solyc09g015660.4 Solanum lycopersicum HOM05D000336 ORTHO05D002705 1.4e-21 106.3 90 61.1
Lj6C625G7 Lonicera japonica HOM05D000336 ORTHO05D002705 6.9e-21 104.0 95 57.9
CSS0016673 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 9.0e-21 103.6 94 57.4
Lj2g0014987 Lotus japonicus HOM05D000336 ORTHO05D002705 9.0e-21 103.6 91 56.0
Phvul.004G074600 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 1.2e-20 103.2 91 54.9
CiPaw.02G175600 Carya illinoinensis HOM05D000336 ORTHO05D002705 2.6e-20 102.1 89 60.7
Lj1A919T51 Lonicera japonica HOM05D000336 ORTHO05D002705 2.6e-20 102.1 95 60.0
Lj6C626G9 Lonicera japonica HOM05D000336 ORTHO05D002705 2.6e-20 102.1 95 57.9
TAR633G1495 Trochodendron aralioides HOM05D000336 ORTHO05D002705 4.5e-20 101.3 98 57.1
CANSAT54G2317 Cannabis sativa HOM05D000336 ORTHO05D002705 5.8e-20 100.9 93 52.7
FvH4_7g19980 Fragaria vesca HOM05D000336 ORTHO05D002705 1.7e-19 99.4 93 55.9
FAN03G1721 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.7e-19 99.4 93 55.9
FAN06G4785 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.7e-19 99.4 93 55.9
Cpa.g.sc53.42 Carica papaya HOM05D000336 ORTHO05D002705 2.2e-19 99.0 90 55.6
Gohir.D10G215500 Gossypium hirsutum HOM05D000336 ORTHO05D002705 2.2e-19 99.0 93 52.7
Gorai.011G241100 Gossypium raimondii HOM05D000336 ORTHO05D002705 2.2e-19 99.0 93 52.7
Potri.008G043000 Populus trichocarpa HOM05D000336 ORTHO05D002705 2.2e-19 99.0 93 59.1
vmacro00765 Vaccinium macrocarpon HOM05D000336 ORTHO05D002705 4.9e-19 97.8 97 54.6
CsaV3_5G025830 Cucumis sativus L. HOM05D000336 ORTHO05D002705 6.4e-19 97.4 90 53.3
GSVIVG01034328001 Vitis vinifera HOM05D000336 ORTHO05D002705 6.4e-19 97.4 95 56.8
CANSAT54G1049 Cannabis sativa HOM05D000336 ORTHO05D002705 8.4e-19 97.1 93 50.5
Sed0006647 Sechium edule HOM05D000336 ORTHO05D002705 8.4e-19 97.1 92 51.1
TWI60G1326 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 1.4e-18 96.3 98 54.1
Sabra10G0169200 Salix brachista HOM05D000336 ORTHO05D002705 3.2e-18 95.1 98 53.1
TPR.G36639 Trifolium pratense HOM05D000336 ORTHO05D002705 3.2e-18 95.1 85 55.3
CiPaw.01G275200 Carya illinoinensis HOM05D000336 ORTHO05D002705 4.2e-18 94.7 89 57.3
Sc05g0003330 Simmondsia chinensis HOM05D000336 ORTHO05D002705 4.2e-18 94.7 90 55.6
Lalb_Chr19g0129591 Lupinus albus HOM05D000336 ORTHO05D002705 1.2e-17 93.2 89 51.7
Sabra08G0029600 Salix brachista HOM05D000336 ORTHO05D002705 1.2e-17 93.2 89 57.3
Actinidia35805 Actinidia chinensis HOM05D000336 ORTHO05D002705 1.6e-17 92.8 95 53.7
Ciclev10031383m.g Citrus clementina HOM05D000336 ORTHO05D002705 1.6e-17 92.8 94 48.9
SalBow3G0905 Salvia bowleyana HOM05D000336 ORTHO05D002705 1.6e-17 92.8 96 53.1
HanXRQChr15g0496731 Helianthus annuus HOM05D000336 ORTHO05D002705 2.1e-17 92.4 84 56.0
Hma1.2p1_0385F.1_g141203 Hydrangea macrophylla HOM05D000336 ORTHO05D002705 2.7e-17 92.0 95 51.6
Cc03_g05840 Coffea canephora HOM05D000336 ORTHO05D002705 3.5e-17 91.7 92 54.3
Nitab4.5_0005460g0050 Nicotiana tabacum HOM05D000336 ORTHO05D002705 3.5e-17 91.7 88 55.7
Prupe.2G216800 Prunus persica HOM05D000336 ORTHO05D002705 3.5e-17 91.7 95 54.7
Rhsim04G0175400 Rhododendron simsii HOM05D000336 ORTHO05D002705 3.5e-17 91.7 89 55.1
Actinidia03034 Actinidia chinensis HOM05D000336 ORTHO05D002705 6.0e-17 90.9 95 51.6
Ca_04675_v3 Cicer arietinum L. HOM05D000336 ORTHO05D002705 6.0e-17 90.9 92 47.8
FAN10G2878 Fragaria x ananassa HOM05D000336 ORTHO05D002705 7.9e-17 90.5 93 53.8
Lalb_Chr03g0036001 Lupinus albus HOM05D000336 ORTHO05D002705 7.9e-17 90.5 89 49.4
ECA232G3970 Erigeron canadensis HOM05D000336 ORTHO05D002705 1.0e-16 90.1 98 50.0
Oeu043923.1 Olea europaea HOM05D000336 ORTHO05D002705 1.8e-16 89.4 96 54.2
Peaxi162Scf00108g00148 Petunia axillaris HOM05D000336 ORTHO05D002705 2.3e-16 89.0 75 62.7
Psat2g031560 Pisum sativum HOM05D000336 ORTHO05D002705 2.3e-16 89.0 85 52.9
arahy.Tifrunner.gnm1.ann1.90FR5C Arachis hypogaea HOM05D000336 ORTHO05D002705 5.1e-16 87.8 108 42.6
TWI34G1554 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 6.7e-16 87.4 98 49.0
CAN.G220.42 Capsicum annuum HOM05D000336 ORTHO05D002705 8.7e-16 87.0 93 50.5
MD10G1224000 Malus domestica HOM05D000336 ORTHO05D002705 1.5e-15 86.3 89 55.1
Hund02936 Selenicereus undatus HOM05D000336 ORTHO05D002705 1.5e-15 86.3 93 49.5
Sopen09g033280 Solanum pennellii HOM05D000336 ORTHO05D002705 1.9e-15 85.9 93 51.6
Actinidia35803 Actinidia chinensis HOM05D000336 ORTHO05D002705 2.5e-15 85.5 79 58.2
HanXRQChr01g0023221 Helianthus annuus HOM05D000336 ORTHO05D002705 2.5e-15 85.5 83 55.4
Gohir.A10G207501 Gossypium hirsutum HOM05D000336 ORTHO05D002705 3.3e-15 85.1 93 48.4
Sed0009569 Sechium edule HOM05D000336 ORTHO05D002705 4.3e-15 84.7 90 53.3
Gohir.A12G051100 Gossypium hirsutum HOM05D000336 ORTHO05D002705 1.3e-14 83.2 82 52.4
Gohir.D12G049300 Gossypium hirsutum HOM05D000336 ORTHO05D002705 1.3e-14 83.2 82 52.4
Gorai.008G052200 Gossypium raimondii HOM05D000336 ORTHO05D002705 1.3e-14 83.2 82 52.4
MELO3C002885.2 Cucumis melo HOM05D000336 ORTHO05D002705 1.6e-14 82.8 90 46.7
Duzib106G1105 Durio zibethinus HOM05D000336 ORTHO05D002705 1.6e-14 82.8 93 50.5
QL11p010714 Quercus lobata HOM05D000336 ORTHO05D002705 1.6e-14 82.8 93 47.3
PGSC0003DMG400017209 Solanum tuberosum HOM05D000336 ORTHO05D002705 1.6e-14 82.8 82 54.9
Thecc.02G000600 Theobroma cacao HOM05D000336 ORTHO05D002705 1.6e-14 82.8 84 51.2
Manes.07G103100 Manihot esculenta HOM05D000336 ORTHO05D002705 2.1e-14 82.4 96 49.0
RcHm_v2.0_Chr1g0363941 Rosa chinensis HOM05D000336 ORTHO05D002705 2.1e-14 82.4 72 61.1
Nn2g13023 Nelumbo nucifera HOM05D000336 ORTHO05D002705 3.7e-14 81.6 95 49.5
unitig_0.g2140 Utricularia gibba HOM05D000336 ORTHO05D002705 4.8e-14 81.3 87 56.3
arahy.Tifrunner.gnm1.ann1.AFBY4F Arachis hypogaea HOM05D000336 ORTHO05D002705 8.1e-14 80.5 119 38.7
COL.COLO4_25018 Corchorus olitorius HOM05D000336 ORTHO05D002705 1.1e-13 80.1 84 52.4
Nitab4.5_0000044g0600 Nicotiana tabacum HOM05D000336 ORTHO05D002705 1.1e-13 80.1 93 49.5
COL.COLO4_23722 Corchorus olitorius HOM05D000336 ORTHO05D002705 1.4e-13 79.7 93 47.3
Migut.O00843 Erythranthe guttata HOM05D000336 ORTHO05D002705 1.8e-13 79.3 90 43.3
Prupe.4G121200 Prunus persica HOM05D000336 ORTHO05D002705 1.8e-13 79.3 90 52.2
Peaxi162Scf00602g00315 Petunia axillaris HOM05D000336 ORTHO05D002705 2.4e-13 79.0 93 47.3
ClCG09G020540 Citrullus lanatus HOM05D000336 ORTHO05D002705 3.1e-13 78.6 96 44.8
Lsat_1_v5_gn_1_75080 Lactuca sativa HOM05D000336 ORTHO05D002705 3.1e-13 78.6 89 48.3
Medtr6g033375 Medicago truncatula HOM05D000336 ORTHO05D002705 3.1e-13 78.6 73 53.4
Duzib248G0328 Durio zibethinus HOM05D000336 ORTHO05D002705 4.0e-13 78.2 82 52.4
Medtr6g045290 Medicago truncatula HOM05D000336 ORTHO05D002705 4.0e-13 78.2 75 52.0
Thecc.10G069700 Theobroma cacao HOM05D000336 ORTHO05D002705 4.0e-13 78.2 93 47.3
Sc20g0007200 Simmondsia chinensis HOM05D000336 ORTHO05D002705 5.3e-13 77.8 85 48.2
TAR636G0998 Trochodendron aralioides HOM05D000336 ORTHO05D002705 5.3e-13 77.8 98 45.9
VMungo0464G0405 Vigna mungo HOM05D000336 ORTHO05D002705 5.3e-13 77.8 73 53.4
Atru.chr12.707 Acer truncatum HOM05D000336 ORTHO05D002705 6.9e-13 77.4 94 46.8
Atru.chr12.718 Acer truncatum HOM05D000336 ORTHO05D002705 6.9e-13 77.4 94 46.8
Manes.03G072850 Manihot esculenta HOM05D000336 ORTHO05D002705 9.0e-13 77.0 93 45.2
RcHm_v2.0_Chr5g0022091 Rosa chinensis HOM05D000336 ORTHO05D002705 1.2e-12 76.6 90 44.4
Cpa.g.sc30.64 Carica papaya HOM05D000336 ORTHO05D002705 1.5e-12 76.3 94 46.8
Hund09622 Selenicereus undatus HOM05D000336 ORTHO05D002705 3.4e-12 75.1 93 45.2
Nitab4.5_0000233g0240 Nicotiana tabacum HOM05D000336 ORTHO05D002705 4.5e-12 74.7 88 48.9
SalBow3G1252 Salvia bowleyana HOM05D000336 ORTHO05D002705 4.5e-12 74.7 83 48.2
AL5G32870 Arabidopsis lyrata HOM05D000336 ORTHO05D002705 5.8e-12 74.3 85 47.1
AT3G52280 Arabidopsis thaliana HOM05D000336 ORTHO05D002705 5.8e-12 74.3 96 42.7
MSTRG.4151 Avicennia marina HOM05D000336 ORTHO05D002705 1.0e-11 73.6 93 43.0
Hma1.2p1_2080F.1_g313465 Hydrangea macrophylla HOM05D000336 ORTHO05D002705 1.0e-11 73.6 95 44.2
PSO063G6258 Papaver somniferum HOM05D000336 ORTHO05D002705 1.0e-11 73.6 85 45.9
SGA_v2.0_scaffold341G49354 Striga asiatica HOM05D000336 ORTHO05D002705 1.0e-11 73.6 92 46.7
PSO339G5221 Papaver somniferum HOM05D000336 ORTHO05D002705 1.3e-11 73.2 85 45.9
Lalb_Chr05g0229061 Lupinus albus HOM05D000336 ORTHO05D002705 1.7e-11 72.8 95 42.1
Solyc09g090370.3 Solanum lycopersicum HOM05D000336 ORTHO05D002705 1.7e-11 72.8 82 50.0
Ca_22535_v3 Cicer arietinum L. HOM05D000336 ORTHO05D002705 2.9e-11 72.0 90 43.3
Glyma.08G264100 Glycine max HOM05D000336 ORTHO05D002705 2.9e-11 72.0 100 42.0
Gohir.D04G084800 Gossypium hirsutum HOM05D000336 ORTHO05D002705 2.9e-11 72.0 93 46.2
Gorai.012G094500 Gossypium raimondii HOM05D000336 ORTHO05D002705 2.9e-11 72.0 93 46.2
Medtr8g070660 Medicago truncatula HOM05D000336 ORTHO05D002705 3.8e-11 71.6 93 41.9
ATR0568G145 Amborella trichopoda HOM05D000336 ORTHO05D002705 4.9e-11 71.2 85 47.1
CARHR162040 Cardamine hirsuta HOM05D000336 ORTHO05D002705 6.5e-11 70.9 91 44.0
CDE02G1362 Ceratophyllum demersum HOM05D000336 ORTHO05D002705 6.5e-11 70.9 95 44.2
Carub.0005s1864 Capsella rubella HOM05D000336 ORTHO05D002705 8.4e-11 70.5 91 44.0
Aa31LG10G7430 Aethionema arabicum HOM05D000336 ORTHO05D002705 1.1e-10 70.1 91 44.0
Cc02_g11410 Coffea canephora HOM05D000336 ORTHO05D002705 1.4e-10 69.7 64 57.8
THA.LOC104802753 Tarenaya hassleriana HOM05D000336 ORTHO05D002705 1.4e-10 69.7 87 46.0
FAN11G2885 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.9e-10 69.3 92 42.4
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 1.9e-10 69.3 82 47.6
AUR62029741 Chenopodium quinoa HOM05D000336 ORTHO05D002705 2.5e-10 68.9 91 41.8
PGR044G0317 Punica granatum HOM05D000336 ORTHO05D002705 2.5e-10 68.9 93 39.8
Cfa001168 Carpinus fangiana HOM05D000336 ORTHO05D002705 5.5e-10 67.8 84 47.6
Eucgr.F03534 Eucalyptus grandis HOM05D000336 ORTHO05D002705 5.5e-10 67.8 90 42.2
Lsat_1_v5_gn_9_66981 Lactuca sativa HOM05D000336 ORTHO05D002705 5.5e-10 67.8 95 43.2
Phvul.003G274300 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 7.1e-10 67.4 82 48.8
PGR142G1279 Punica granatum HOM05D000336 ORTHO05D002705 9.3e-10 67.0 94 42.6
FAN25G0380 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.2e-09 66.6 90 40.0
EL10As5g23511 Beta vulgaris HOM05D000336 ORTHO05D002705 1.6e-09 66.2 113 38.9
C07p46900 Brassica napus HOM05D000336 ORTHO05D002705 1.6e-09 66.2 91 39.6
Eucgr.G02811 Eucalyptus grandis HOM05D000336 ORTHO05D002705 1.6e-09 66.2 90 43.3
TPR.G19835 Trifolium pratense HOM05D000336 ORTHO05D002705 1.6e-09 66.2 91 44.0
Migut.F01763 Erythranthe guttata HOM05D000336 ORTHO05D002705 2.1e-09 65.9 43 74.4
BraA03t13981Z Brassica rapa HOM05D000336 ORTHO05D002705 2.7e-09 65.5 91 40.7
Haze_05184 Corylus avellana HOM05D000336 ORTHO05D002705 2.7e-09 65.5 74 52.7
Lj4g0015179 Lotus japonicus HOM05D000336 ORTHO05D002705 2.7e-09 65.5 89 43.8
arahy.Tifrunner.gnm1.ann1.D9KKI5 Arachis hypogaea HOM05D000336 ORTHO05D002705 4.6e-09 64.7 96 42.7
SGA_v2.0_scaffold67G22727 Striga asiatica HOM05D000336 ORTHO05D002705 4.6e-09 64.7 90 36.7
AUR62010103 Chenopodium quinoa HOM05D000336 ORTHO05D002705 7.9e-09 63.9 91 41.8
A03p48810 Brassica napus HOM05D000336 ORTHO05D002705 1.0e-08 63.5 91 39.6
FAN01G0523 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.0e-08 63.5 93 43.0
FAN01G2774 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.0e-08 63.5 93 43.0
Aqoxy4G03225 Aquilegia oxysepala HOM05D000336 ORTHO05D002705 1.8e-08 62.8 95 41.1
arahy.Tifrunner.gnm1.ann1.5H1KXB Arachis hypogaea HOM05D000336 ORTHO05D002705 1.8e-08 62.8 96 41.7
DCAR_027331 Daucus carota HOM05D000336 ORTHO05D002705 1.8e-08 62.8 44 70.5
MSTRG.372 Avicennia marina HOM05D000336 ORTHO05D002705 3.0e-08 62.0 96 41.7
Thhalv10010479m.g Eutrema salsugineum HOM05D000336 ORTHO05D002705 6.7e-08 60.8 85 40.0
Nn2g10696 Nelumbo nucifera HOM05D000336 ORTHO05D002705 6.7e-08 60.8 97 39.2
Sp5g09980 Schrenkiella parvula HOM05D000336 ORTHO05D002705 8.7e-08 60.5 91 37.4
MBI02_g34318_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D002705 1.1e-07 60.1 91 40.7
Sabra01G0052100 Salix brachista HOM05D000336 ORTHO05D002705 1.1e-07 60.1 91 40.7
unitig_748.g8306 Utricularia gibba HOM05D000336 ORTHO05D002705 1.1e-07 60.1 83 43.4
AUR62006397 Chenopodium quinoa HOM05D000336 ORTHO05D002705 1.5e-07 59.7 74 45.9
Mapoly0010s0030 Marchantia polymorpha HOM05D000336 ORTHO05D002705 1.5e-07 59.7 85 42.4
CANSAT35G1657 Cannabis sativa HOM05D000336 ORTHO05D002705 1.9e-07 59.3 92 43.5
SHI09137 Sapria himalayana HOM05D000336 ORTHO05D002705 1.9e-07 59.3 90 40.0
Nitab4.5_0013605g0010 Nicotiana tabacum HOM05D000336 ORTHO05D002705 2.5e-07 58.9 41 73.2
unitig_32.g10850 Utricularia gibba HOM05D000336 ORTHO05D002705 4.3e-07 58.2 74 43.2
Atru.chr10.202 Acer truncatum HOM05D000336 ORTHO05D002705 5.7e-07 57.8 95 41.1
AUR62013097 Chenopodium quinoa HOM05D000336 ORTHO05D002705 5.7e-07 57.8 74 47.3
Eucgr.F03145 Eucalyptus grandis HOM05D000336 ORTHO05D002705 5.7e-07 57.8 91 37.4
ECA248G3137 Erigeron canadensis HOM05D000336 ORTHO05D002705 7.4e-07 57.4 45 66.7
Psat4g111960 Pisum sativum HOM05D000336 ORTHO05D002705 7.4e-07 57.4 74 47.3
RcHm_v2.0_Chr6g0253301 Rosa chinensis HOM05D066344 ORTHO05D050710 9.6e-07 57.0 66 51.5
BolC7t45206H Brassica oleracea HOM05D000336 ORTHO05D002705 1.3e-06 56.6 72 41.7
AUR62029799 Chenopodium quinoa HOM05D000336 ORTHO05D002705 1.3e-06 56.6 85 35.3
SEGI_39566 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 1.6e-06 56.2 95 40.0
arahy.Tifrunner.gnm1.ann1.DZ8KVC Arachis hypogaea HOM05D000336 ORTHO05D002705 2.8e-06 55.5 91 40.7
Phvul.009G245800 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 2.8e-06 55.5 85 41.2
AUR62006446 Chenopodium quinoa HOM05D000336 ORTHO05D002705 4.8e-06 54.7 97 33.0
Rhsim02G0042000 Rhododendron simsii HOM05D000336 ORTHO05D002705 4.8e-06 54.7 89 38.2
PSO384G0900 Papaver somniferum HOM05D000336 ORTHO05D002705 8.2e-06 53.9 91 40.7


User provided reference genes

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