Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.2e-35 152.5 72 100.0
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 2.6e-30 134.8 69 89.9
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 3.4e-30 134.4 70 88.6
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 3.4e-30 134.4 70 88.6
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 4.5e-30 134.0 70 87.1
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.0e-29 132.9 69 88.4
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 6.5e-29 130.2 69 85.5
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.4e-29 129.8 69 84.1
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 1.1e-28 129.4 70 85.7
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.9e-28 128.6 69 85.5
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 2.5e-28 128.3 66 89.4
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 2.5e-28 128.3 66 89.4
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 2.5e-28 128.3 66 89.4
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 3.2e-28 127.9 69 82.6
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.2e-28 127.9 70 80.0
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.2e-28 127.9 69 78.3
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 4.2e-28 127.5 70 81.4
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 4.2e-28 127.5 70 78.6
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 4.2e-28 127.5 70 78.6
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 5.5e-28 127.1 70 85.7
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.1e-28 126.7 70 78.6
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 7.1e-28 126.7 70 78.6
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 7.1e-28 126.7 70 80.0
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 9.3e-28 126.3 70 78.6
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 9.3e-28 126.3 69 82.6
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.2e-27 125.9 70 82.9
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.2e-27 125.9 70 82.9
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.2e-27 125.9 70 82.9
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.2e-27 125.9 70 82.9
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.6e-27 125.6 70 81.4
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.6e-27 125.6 70 81.4
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.1e-27 125.2 70 82.9
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.1e-27 125.2 70 82.9
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-27 125.2 70 82.9
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-27 125.2 70 82.9
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-27 125.2 70 82.9
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.1e-27 125.2 70 82.9
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 2.7e-27 124.8 70 81.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.7e-27 124.8 69 85.5
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 3.5e-27 124.4 70 80.0
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.5e-27 124.4 70 80.0
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 4.6e-27 124.0 70 75.7
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 6.0e-27 123.6 70 77.1
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 7.9e-27 123.2 70 82.9
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 7.9e-27 123.2 70 77.1
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 1.0e-26 122.9 70 78.6
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.3e-26 122.5 69 81.2
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.3e-26 122.5 69 79.7
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.3e-26 122.5 69 79.7
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.8e-26 122.1 70 78.6
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.3e-26 121.7 69 82.6
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.3e-26 121.7 70 75.7
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 2.3e-26 121.7 70 74.3
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 2.3e-26 121.7 70 74.3
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 2.3e-26 121.7 70 74.3
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.0e-26 121.3 70 81.4
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 3.0e-26 121.3 69 81.2
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.0e-26 121.3 70 75.7
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 3.0e-26 121.3 70 75.7
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 3.0e-26 121.3 70 77.1
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 5.1e-26 120.6 70 75.7
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 5.1e-26 120.6 66 84.8
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.1e-26 120.6 70 77.1
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 6.7e-26 120.2 72 73.6
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 6.7e-26 120.2 70 74.3
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 6.7e-26 120.2 70 77.1
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 6.7e-26 120.2 70 77.1
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 8.7e-26 119.8 70 75.7
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 8.7e-26 119.8 70 75.7
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 8.7e-26 119.8 70 74.3
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.1e-25 119.4 70 74.3
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.1e-25 119.4 70 74.3
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.1e-25 119.4 70 74.3
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.1e-25 119.4 70 77.1
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.1e-25 119.4 70 75.7
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 78.3
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 1.5e-25 119.0 70 77.1
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.5e-25 119.0 68 79.4
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.9e-25 118.6 70 75.7
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 2.5e-25 118.2 70 72.9
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 2.5e-25 118.2 69 75.4
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 2.5e-25 118.2 70 75.7
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.5e-25 118.2 70 75.7
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 4.3e-25 117.5 72 70.8
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 5.7e-25 117.1 70 80.0
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 7.4e-25 116.7 67 77.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.4e-25 116.7 62 83.9
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 1.3e-24 115.9 70 72.9
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-24 115.9 70 71.4
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.6e-24 115.5 70 70.0
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 3.7e-24 114.4 58 86.2
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 69.6
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 6.2e-24 113.6 63 74.6
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 6.2e-24 113.6 63 74.6
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 6.2e-24 113.6 70 71.4
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.4e-23 112.5 71 70.4
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.4e-23 111.7 70 68.6
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.4e-23 111.7 70 68.6
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.4e-23 111.7 69 71.0
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 5.3e-23 110.5 61 77.0
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 3.4e-22 107.8 62 75.8
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.4e-22 107.8 69 72.5
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.5e-22 107.5 69 68.1
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.5e-22 107.5 70 68.6
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-21 105.9 70 62.9
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 66.7
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 66.7
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 66.7
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-21 105.1 70 65.7
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-21 105.1 70 65.7
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.9e-21 104.8 70 64.3
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.0e-21 104.0 70 65.7
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 69 63.8
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.3e-20 99.8 69 59.4
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.3e-20 99.8 69 59.4
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 2.1e-19 98.6 62 72.6
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 7.9e-19 96.7 58 74.1
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 8.7e-18 93.2 67 55.2
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.7e-16 87.8 47 80.9
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.0e-15 83.2 58 65.5
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-14 82.8 46 78.3
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.2e-08 62.0 72 43.1
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 9.1e-07 56.6 70 37.1
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.6e-06 55.1 70 40.0


User provided reference genes

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