Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015233 Daucus carota HOM05D002492 ORTHO05D002621 4.9e-151 537.7 264 100.0
DCAR_022394 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-37 160.2 259 34.0
DCAR_028297 Daucus carota HOM05D002492 ORTHO05D002621 7.6e-35 151.8 299 33.4
DCAR_024727 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-32 143.7 252 32.1
DCAR_010167 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-32 143.3 256 30.9
DCAR_010813 Daucus carota HOM05D002492 ORTHO05D002621 7.9e-32 141.7 252 31.3
DCAR_014850 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-31 141.4 256 32.4
DCAR_030141 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-31 140.2 252 31.3
DCAR_024921 Daucus carota HOM05D002492 ORTHO05D002621 5.1e-31 139.0 255 32.5
DCAR_018168 Daucus carota HOM05D002492 ORTHO05D002621 6.6e-31 138.7 252 31.0
DCAR_024134 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-30 137.9 253 29.2
DCAR_031281 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-30 136.3 255 32.2
DCAR_005840 Daucus carota HOM05D002492 ORTHO05D002621 5.6e-30 135.6 252 33.7
DCAR_028727 Daucus carota HOM05D002492 ORTHO05D002621 5.6e-30 135.6 252 33.7
DCAR_028586 Daucus carota HOM05D002492 ORTHO05D002621 9.6e-30 134.8 245 32.2
DCAR_016052 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-29 133.3 255 32.2
DCAR_024736 Daucus carota HOM05D002492 ORTHO05D002621 6.2e-29 132.1 255 31.0
DCAR_000918 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-28 131.3 245 32.2
DCAR_020954 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-28 131.0 255 31.0
DCAR_010336 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-28 129.8 255 32.9
DCAR_029961 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-27 127.9 223 32.3
DCAR_024381 Daucus carota HOM05D002492 ORTHO05D002621 8.4e-26 121.7 252 29.0
DCAR_025344 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-24 117.1 252 29.0
DCAR_028351 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-23 114.0 262 29.8
DCAR_005243 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-22 111.3 252 29.0
DCAR_031239 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-20 103.2 189 31.2
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-19 99.4 252 23.4
DCAR_031670 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-18 96.7 149 30.2
DCAR_001182 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-18 95.5 148 33.1
DCAR_028309 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-17 92.8 209 32.5
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 7.1e-17 92.0 257 24.5
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-17 91.7 257 24.5
DCAR_016811 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-16 90.9 259 24.7
DCAR_022646 Daucus carota HOM05D002492 ORTHO05D002621 3.5e-16 89.7 297 24.6
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 7.9e-16 88.6 247 25.5
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-15 87.8 252 24.2
DCAR_016062 Daucus carota HOM05D002492 ORTHO05D002621 3.0e-15 86.7 250 24.0
DCAR_031648 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-15 86.3 257 28.0
DCAR_001527 Daucus carota HOM05D002492 ORTHO05D002621 5.1e-15 85.9 143 37.1
DCAR_010411 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-14 83.6 266 22.9
DCAR_010788 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-14 83.6 244 23.0
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 2.5e-14 83.6 258 24.8
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 4.3e-14 82.8 258 24.0
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 5.7e-14 82.4 238 26.5
DCAR_029962 Daucus carota HOM05D002492 ORTHO05D002621 9.6e-14 81.6 185 25.9
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-13 81.3 247 24.7
DCAR_009543 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-13 80.1 134 28.4
DCAR_031646 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-13 80.1 255 25.1
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-13 79.0 246 25.6
DCAR_030130 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-13 79.0 246 25.6
DCAR_028352 Daucus carota HOM05D000003 ORTHO05D000004 1.1e-12 78.2 186 26.3
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-12 78.2 247 23.5
DCAR_031404 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-12 77.8 249 25.7
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.4e-12 77.8 257 25.3
DCAR_028491 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-12 77.4 246 23.6
DCAR_030199 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-12 77.4 248 24.2
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-12 77.0 242 21.5
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.4e-12 77.0 252 25.0
DCAR_005616 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-12 76.6 254 22.4
DCAR_028507 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-12 76.6 249 26.5
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 3.1e-12 76.6 144 28.5
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 4.1e-12 76.3 246 22.8
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 4.1e-12 76.3 128 31.2
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 5.3e-12 75.9 231 26.0
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 1.5e-11 74.3 243 24.3
DCAR_001185 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-11 74.3 125 33.6
DCAR_017314 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-11 73.9 126 31.0
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 3.4e-11 73.2 142 29.6
DCAR_028299 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-11 72.8 194 24.7
DCAR_016061 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-11 72.4 76 39.5
DCAR_031459 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-11 72.4 227 23.8
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.9e-11 72.4 254 24.0
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 7.6e-11 72.0 258 24.0
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 7.6e-11 72.0 258 23.3
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 1.7e-10 70.9 135 29.6
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-10 69.7 140 30.7
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.8e-10 69.7 238 24.4
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 5.0e-10 69.3 254 26.0
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 6.5e-10 68.9 237 23.6
DCAR_017737 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-10 68.9 223 23.8
DCAR_002003 Daucus carota HOM05D000798 ORTHO05D002621 1.1e-09 68.2 186 28.0
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.1e-09 68.2 144 28.5
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 2.5e-09 67.0 246 26.0
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 2.5e-09 67.0 246 26.0
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 3.2e-09 66.6 249 22.5
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 4.2e-09 66.2 228 24.1
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.2e-09 66.2 259 22.8
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.2e-09 66.2 245 23.7
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 5.5e-09 65.9 255 25.1
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 5.5e-09 65.9 255 25.1
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.5e-09 65.9 246 22.0
DCAR_017323 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-09 65.5 79 43.0
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 7.2e-09 65.5 254 22.4
DCAR_028510 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-09 65.5 139 31.7
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 7.2e-09 65.5 245 23.3
DCAR_017539 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-08 64.7 135 32.6
DCAR_010019 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-08 63.9 227 24.7
DCAR_010867 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-08 63.9 247 21.5
DCAR_031397 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-08 63.5 135 31.9
DCAR_031399 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-08 62.4 247 24.7
DCAR_025599 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-07 61.6 241 20.7
DCAR_001183 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-07 61.2 149 31.5
DCAR_031431 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-07 60.5 230 20.9
DCAR_010631 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-07 59.7 257 20.2
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 5.1e-07 59.3 145 24.8
DCAR_017278 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-07 58.9 246 23.6
DCAR_020330 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-07 58.9 250 24.8
DCAR_024224 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-07 58.9 211 19.9
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.7e-07 58.9 122 30.3
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 6.7e-07 58.9 109 31.2
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.1e-06 58.2 123 27.6
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 1.5e-06 57.8 78 35.9
DCAR_017458 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-06 57.4 215 19.5
DCAR_017540 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-06 57.4 153 31.4
DCAR_019746 Daucus carota HOM05D020096 ORTHO05D014614 1.9e-06 57.4 134 27.6
DCAR_019762 Daucus carota HOM05D020096 ORTHO05D014614 1.9e-06 57.4 134 27.6
DCAR_019770 Daucus carota HOM05D020096 ORTHO05D014614 1.9e-06 57.4 134 27.6
DCAR_031409 Daucus carota HOM05D002492 ORTHO05D002621 1.9e-06 57.4 136 31.6
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 1.9e-06 57.4 246 24.0
RcHm_v2.0_Chr7g0184001 Rosa chinensis HOM05D006849 ORTHO05D003348 1.9e-06 57.4 117 25.6
Aqoxy1G03705 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 2.5e-06 57.0 239 20.1
DCAR_015761 Daucus carota HOM05D002492 ORTHO05D002621 7.4e-06 55.5 144 25.0
TPR.G9150 Trifolium pratense HOM05D007499 ORTHO05D000174 7.4e-06 55.5 133 28.6
Ah.02g114080 Amaranthus hybridus HOM05D000824 ORTHO05D003555 9.7e-06 55.1 247 21.9
CAN.G1160.3 Capsicum annuum HOM05D002907 ORTHO05D000065 9.7e-06 55.1 129 27.1


User provided reference genes

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