Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 0.0e+00 1198.0 598 100.0
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 3.8e-207 725.3 594 62.8
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 2.5e-203 712.6 587 61.2
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 9.6e-203 710.7 591 61.4
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 1.6e-202 709.9 585 60.2
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 3.6e-202 708.8 588 61.2
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 3.1e-201 705.7 592 59.8
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 2.0e-200 703.0 636 57.7
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.4e-199 697.6 585 60.0
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.9e-198 696.4 493 68.4
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 9.3e-198 694.1 585 60.2
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 1.2e-197 693.7 519 65.5
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 6.0e-197 691.4 589 60.3
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 7.9e-197 691.0 587 59.3
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 1.0e-196 690.6 586 59.4
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 3.9e-196 688.7 507 66.1
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 6.7e-196 688.0 586 60.6
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 8.7e-196 687.6 584 60.4
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 3.3e-195 685.6 597 57.8
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 4.3e-195 685.3 588 59.5
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 4.3e-195 685.3 587 59.5
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.6e-195 684.9 587 58.8
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 1.6e-194 683.3 597 58.6
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 8.1e-194 681.0 519 64.4
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 8.1e-194 681.0 591 58.7
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 1.2e-192 677.2 586 58.7
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 5.8e-192 674.9 590 59.0
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.3e-191 673.7 590 58.3
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.7e-191 673.3 588 58.3
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 2.2e-191 672.9 583 58.3
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 2.9e-191 672.5 584 58.7
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.4e-191 671.0 606 57.4
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 1.4e-190 670.2 506 64.6
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.4e-190 670.2 592 57.6
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.9e-190 669.8 588 57.8
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.2e-190 668.7 592 57.8
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 5.5e-190 668.3 594 56.9
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 9.3e-190 667.5 583 57.6
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 9.3e-190 667.5 492 65.9
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 1.6e-189 666.8 589 58.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 3.5e-189 665.6 587 56.6
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 4.6e-189 665.2 594 57.6
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.0e-188 664.1 609 55.0
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 1.0e-188 664.1 590 57.3
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 3.0e-188 662.5 582 57.4
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 3.3e-187 659.1 511 62.6
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.3e-187 658.7 585 55.6
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 5.7e-187 658.3 577 56.8
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 9.6e-187 657.5 582 56.9
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 9.6e-187 657.5 669 53.4
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.1e-186 656.4 596 57.4
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 2.1e-186 656.4 586 57.7
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 4.8e-186 655.2 585 59.0
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 9.0e-185 651.0 585 56.1
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 9.0e-185 651.0 585 57.1
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 9.0e-185 651.0 587 58.1
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 1.4e-182 643.7 596 57.0
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 2.5e-182 642.9 591 55.2
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 2.1e-181 639.8 583 55.2
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 3.6e-181 639.0 606 55.8
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 6.1e-181 638.3 593 53.8
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 8.7e-180 634.4 587 54.9
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 3.3e-179 632.5 583 55.9
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 5.7e-179 631.7 590 54.7
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 3.7e-178 629.0 587 55.0
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 6.3e-178 628.2 595 54.3
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.1e-177 627.5 587 53.7
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.4e-177 627.1 565 57.0
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 4.1e-177 625.5 585 53.8
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 6.9e-177 624.8 529 61.4
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 6.9e-177 624.8 589 54.5
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 9.0e-177 624.4 587 54.9
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 2.6e-176 622.9 594 53.7
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 1.0e-175 620.9 590 53.4
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 1.0e-175 620.9 582 55.0
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 8.5e-175 617.8 642 52.3
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 9.4e-174 614.4 508 58.5
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.1e-173 611.7 553 55.9
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 7.9e-173 611.3 599 53.4
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 3.0e-172 609.4 490 60.0
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.3e-171 605.9 607 52.4
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 1.8e-169 600.1 526 58.0
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 3.4e-168 595.9 588 52.2
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 2.2e-167 593.2 588 52.2
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 9.4e-166 587.8 585 54.0
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 6.1e-165 585.1 624 48.6
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 1.0e-164 584.3 586 51.0
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 3.9e-164 582.4 521 55.5
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.7e-162 577.0 587 51.6
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 4.0e-156 555.8 502 54.8
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 2.8e-154 549.7 598 49.8
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 3.2e-150 536.2 471 58.6
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 1.2e-149 534.3 417 64.3
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.6e-149 533.9 473 57.3
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 1.7e-146 523.9 380 65.5
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 3.7e-146 522.7 371 67.9
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 4.8e-146 522.3 588 47.6
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 1.0e-143 514.6 458 56.1
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 8.0e-141 505.0 545 49.5
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 2.0e-136 490.3 388 59.0
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 3.5e-136 489.6 350 66.0
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 9.5e-134 481.5 349 66.8
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 4.0e-132 476.1 350 67.1
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 4.0e-132 476.1 513 51.5
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 1.6e-128 464.2 349 65.3
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 7.5e-123 445.3 472 47.5
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 5.0e-119 432.6 505 47.7
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 4.3e-118 429.5 526 47.5
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 1.8e-116 424.1 303 68.6
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.6e-115 420.2 434 50.0
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 9.8e-115 418.3 303 68.0
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 1.3e-114 417.9 324 63.0
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.4e-113 414.5 329 63.2
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 2.7e-112 410.2 504 43.1
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.4e-105 387.9 318 60.1
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 3.5e-104 383.3 400 50.8
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.1e-102 378.3 528 41.5
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 5.4e-89 332.8 348 51.7
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 1.3e-87 328.2 245 66.5
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.3e-85 321.6 267 61.0
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.2e-83 315.1 281 54.8
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 4.3e-78 296.6 219 65.3
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 1.4e-73 281.6 505 33.1
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.1e-68 263.8 241 53.9
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.0e-55 222.2 284 44.4
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.1e-55 219.9 161 64.0
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.0e-54 218.0 144 70.1
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.5e-51 208.4 263 42.2
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.5e-49 201.1 191 52.4
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.9e-47 193.7 133 67.7
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 7.0e-36 156.4 205 44.9
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 1.0e-34 152.5 185 49.2
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.8e-34 150.6 173 46.8
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 5.0e-34 150.2 170 49.4
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 2.1e-32 144.8 173 50.3
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 1.8e-31 141.7 172 40.7
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 7.5e-30 136.3 154 48.7
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 2.4e-28 131.3 152 43.4
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 2.0e-27 128.3 98 64.3
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 4.7e-24 117.1 141 46.1
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.8e-23 115.2 203 36.0
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 2.3e-23 114.8 85 67.1
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 7.0e-12 76.6 71 52.1
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 7.5e-06 56.6 120 36.7


User provided reference genes

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