Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015187 Daucus carota HOM05D000724 ORTHO05D012138 2.4e-182 642.1 336 100.0
DCAR_019168 Daucus carota HOM05D000724 ORTHO05D012138 1.8e-33 147.5 262 40.1
MD11G1136800 Malus domestica HOM05D000724 ORTHO05D000755 1.2e-08 65.1 185 31.9
SGA_v2.0_scaffold2G00886 Striga asiatica HOM05D000724 ORTHO05D000755 1.2e-08 65.1 193 29.0
Sc15g0001460 Simmondsia chinensis HOM05D000724 ORTHO05D000755 4.5e-08 63.2 170 31.8
Cpa.g.sc545.3 Carica papaya HOM05D000724 ORTHO05D000755 5.9e-08 62.8 167 30.5
PSO063G3305 Papaver somniferum HOM05D000724 ORTHO05D000755 5.9e-08 62.8 190 31.6
Cfa011311 Carpinus fangiana HOM05D000724 ORTHO05D000755 7.7e-08 62.4 168 31.5
Haze_23817 Corylus avellana HOM05D000724 ORTHO05D000755 7.7e-08 62.4 168 31.5
Manes.11G146000 Manihot esculenta HOM05D000724 ORTHO05D000755 1.0e-07 62.0 181 29.3
CiPaw.13G113800 Carya illinoinensis HOM05D000724 ORTHO05D000755 1.3e-07 61.6 168 31.5
PGR102G1474 Punica granatum HOM05D000724 ORTHO05D000755 1.3e-07 61.6 167 29.9
Zm00001eb045630 Zea mays HOM05D000724 ORTHO05D000755 1.3e-07 61.6 165 29.1
CSS0027784 Camellia sinensis var. sinensis HOM05D000724 ORTHO05D012138 1.7e-07 61.2 131 33.6
Dinv32738 Davidia involucrata HOM05D000724 ORTHO05D000755 1.7e-07 61.2 193 29.5
HanXRQChr14g0452731 Helianthus annuus HOM05D000724 ORTHO05D000755 1.7e-07 61.2 167 30.5
vmacro14434 Vaccinium macrocarpon HOM05D000724 ORTHO05D000755 1.7e-07 61.2 185 30.3
arahy.Tifrunner.gnm1.ann1.D5R23C Arachis hypogaea HOM05D000724 ORTHO05D000755 3.8e-07 60.1 193 30.1
arahy.Tifrunner.gnm1.ann1.R4BZXE Arachis hypogaea HOM05D000724 ORTHO05D000755 3.8e-07 60.1 193 30.1
CSS0044392 Camellia sinensis var. sinensis HOM05D000724 ORTHO05D000755 3.8e-07 60.1 192 28.1
HanXRQChr02g0055811 Helianthus annuus HOM05D000724 ORTHO05D000755 3.8e-07 60.1 186 27.4
HanXRQChr13g0396801 Helianthus annuus HOM05D000724 ORTHO05D000755 3.8e-07 60.1 167 29.9
Nn2g13104 Nelumbo nucifera HOM05D000724 ORTHO05D000755 3.8e-07 60.1 170 31.8
PSO339G6449 Papaver somniferum HOM05D000724 ORTHO05D000755 3.8e-07 60.1 188 30.9
Sc06g0010280 Simmondsia chinensis HOM05D000724 ORTHO05D000755 3.8e-07 60.1 197 29.4
MSTRG.17797 Avicennia marina HOM05D000724 ORTHO05D000755 5.0e-07 59.7 185 28.6
CANSAT54G1185 Cannabis sativa HOM05D000724 ORTHO05D000755 5.0e-07 59.7 185 30.3
Dinv36439 Davidia involucrata HOM05D000724 ORTHO05D000755 5.0e-07 59.7 170 31.2
ECA238G2904 Erigeron canadensis HOM05D000724 ORTHO05D000755 5.0e-07 59.7 182 29.7
Gohir.A05G103500 Gossypium hirsutum HOM05D000724 ORTHO05D000755 5.0e-07 59.7 170 30.0
TAR633G0969 Trochodendron aralioides HOM05D000724 ORTHO05D000755 5.0e-07 59.7 168 31.0
unitig_749.g13812 Utricularia gibba HOM05D000724 ORTHO05D000755 5.0e-07 59.7 118 34.7
Actinidia07139 Actinidia chinensis HOM05D000724 ORTHO05D000755 6.5e-07 59.3 130 32.3
Manes.04G020100 Manihot esculenta HOM05D000724 ORTHO05D000755 6.5e-07 59.3 180 28.3
Potri.004G211300 Populus trichocarpa HOM05D000724 ORTHO05D000755 6.5e-07 59.3 182 28.0
SalBow3G1975 Salvia bowleyana HOM05D000724 ORTHO05D000755 6.5e-07 59.3 165 30.3
VMungo1127G1235 Vigna mungo HOM05D000724 ORTHO05D000755 6.5e-07 59.3 168 31.0
GSVIVG01021625001 Vitis vinifera HOM05D000724 ORTHO05D000755 6.5e-07 59.3 118 33.9
FAN21G2811 Fragaria x ananassa HOM05D000724 ORTHO05D000755 8.5e-07 58.9 193 29.0
Gohir.A08G198400 Gossypium hirsutum HOM05D000724 ORTHO05D000755 8.5e-07 58.9 169 28.4
Lj2C1027T1 Lonicera japonica HOM05D000724 ORTHO05D000755 8.5e-07 58.9 185 30.3
Lalb_Chr03g0027391 Lupinus albus HOM05D000724 ORTHO05D000755 8.5e-07 58.9 196 29.1
Phvul.011G079800 Phaseolus vulgaris HOM05D000724 ORTHO05D000755 8.5e-07 58.9 168 31.0
Prupe.6G102300 Prunus persica HOM05D000724 ORTHO05D000755 8.5e-07 58.9 182 29.1
TWI31G0014 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 8.5e-07 58.9 187 29.9
Actinidia24105 Actinidia chinensis HOM05D000724 ORTHO05D000755 1.1e-06 58.5 181 28.2
ECA233G5471 Erigeron canadensis HOM05D000724 ORTHO05D000755 1.1e-06 58.5 167 29.9
Hma1.2p1_0307F.1_g119725 Hydrangea macrophylla HOM05D000724 ORTHO05D000755 1.1e-06 58.5 168 29.8
MD03G1118500 Malus domestica HOM05D000724 ORTHO05D000755 1.1e-06 58.5 185 30.3
Oeu030190.1 Olea europaea HOM05D000724 ORTHO05D000755 1.1e-06 58.5 168 29.8
TAR636G0450 Trochodendron aralioides HOM05D000724 ORTHO05D000755 1.1e-06 58.5 168 30.4
Aa31LG1G12650 Aethionema arabicum HOM05D000724 ORTHO05D000755 1.5e-06 58.2 192 29.2
CiPaw.14G081100 Carya illinoinensis HOM05D000724 ORTHO05D000755 1.5e-06 58.2 168 30.4
FvH4_3g32190 Fragaria vesca HOM05D000724 ORTHO05D000755 1.5e-06 58.2 192 28.1
FAN11G0228 Fragaria x ananassa HOM05D000724 ORTHO05D000755 1.5e-06 58.2 192 28.1
FAN16G3188 Fragaria x ananassa HOM05D000724 ORTHO05D000755 1.5e-06 58.2 192 28.1
FAN25G0453 Fragaria x ananassa HOM05D000724 ORTHO05D000755 1.5e-06 58.2 194 28.9
Oeu013461.1 Olea europaea HOM05D000724 ORTHO05D000755 1.5e-06 58.2 170 31.2
Potri.009G014500 Populus trichocarpa HOM05D000724 ORTHO05D000755 1.5e-06 58.2 182 28.0
SGA_v2.0_scaffold223G42862 Striga asiatica HOM05D000724 ORTHO05D000755 1.5e-06 58.2 118 33.9
unitig_26.g9775 Utricularia gibba HOM05D000724 ORTHO05D000755 1.5e-06 58.2 118 33.9
GSVIVG01025193001 Vitis vinifera HOM05D000724 ORTHO05D000755 1.5e-06 58.2 168 30.4
MSTRG.7537 Avicennia marina HOM05D000724 ORTHO05D000755 1.9e-06 57.8 131 31.3
EL10Ac9g22528 Beta vulgaris HOM05D000724 ORTHO05D000755 1.9e-06 57.8 170 31.2
BNapus_Darmor_BZH_scaffold_38p00100 Brassica napus HOM05D000724 ORTHO05D000755 1.9e-06 57.8 132 33.3
C02p11530 Brassica napus HOM05D000724 ORTHO05D000755 1.9e-06 57.8 132 33.3
BraA02t05711Z Brassica rapa HOM05D000724 ORTHO05D000755 1.9e-06 57.8 132 33.3
AUR62042187 Chenopodium quinoa HOM05D000724 ORTHO05D000755 1.9e-06 57.8 169 31.4
Eucgr.B02504 Eucalyptus grandis HOM05D000724 ORTHO05D000755 1.9e-06 57.8 182 28.6
SalBow3G1335 Salvia bowleyana HOM05D000724 ORTHO05D000755 1.9e-06 57.8 168 29.8
SalBow8G4875 Salvia bowleyana HOM05D000724 ORTHO05D000755 1.9e-06 57.8 131 31.3
unitig_899.g14919 Utricularia gibba HOM05D000724 ORTHO05D000755 1.9e-06 57.8 187 28.9
vmacro03200 Vaccinium macrocarpon HOM05D000724 ORTHO05D000755 1.9e-06 57.8 169 27.8
Actinidia38284 Actinidia chinensis HOM05D000724 ORTHO05D012138 2.5e-06 57.4 168 30.4
AL8G37280 Arabidopsis lyrata HOM05D000724 ORTHO05D000755 2.5e-06 57.4 193 28.5
Carub.0008s2137 Capsella rubella HOM05D000724 ORTHO05D000755 2.5e-06 57.4 191 28.3
CAN.G631.32 Capsicum annuum HOM05D000724 ORTHO05D000755 2.5e-06 57.4 112 34.8
Cc01_g11100 Coffea canephora HOM05D000724 ORTHO05D000755 2.5e-06 57.4 169 29.0
Cc09_g08040 Coffea canephora HOM05D000724 ORTHO05D000755 2.5e-06 57.4 118 33.1
Glyma.12G075800 Glycine max HOM05D000724 ORTHO05D000755 2.5e-06 57.4 168 30.4
Lsat_1_v5_gn_6_45641 Lactuca sativa HOM05D000724 ORTHO05D000755 2.5e-06 57.4 167 29.9
Medtr2g094520 Medicago truncatula HOM05D000724 ORTHO05D000755 2.5e-06 57.4 172 26.7
Nn2g10802 Nelumbo nucifera HOM05D000724 ORTHO05D000755 2.5e-06 57.4 168 30.4
Psat7g225360 Pisum sativum HOM05D000724 ORTHO05D000755 2.5e-06 57.4 188 29.8
QL01p022031 Quercus lobata HOM05D000724 ORTHO05D000755 2.5e-06 57.4 168 29.8
Sed0001110 Sechium edule HOM05D000724 ORTHO05D000755 2.5e-06 57.4 171 27.5
Thecc.09G341600 Theobroma cacao HOM05D000724 ORTHO05D000755 2.5e-06 57.4 186 29.6
unitig_37.g12079 Utricularia gibba HOM05D000724 ORTHO05D000755 2.5e-06 57.4 117 32.5
AL1G60240 Arabidopsis lyrata HOM05D000724 ORTHO05D000755 3.2e-06 57.0 173 29.5
MSTRG.18663 Avicennia marina HOM05D000724 ORTHO05D000755 3.2e-06 57.0 194 28.9
BcaC04g19731 Brassica carinata HOM05D000724 ORTHO05D000755 3.2e-06 57.0 193 28.5
C09p53420 Brassica napus HOM05D000724 ORTHO05D000755 3.2e-06 57.0 193 28.5
BolC9t58216H Brassica oleracea HOM05D000724 ORTHO05D000755 3.2e-06 57.0 193 28.5
Carub.0001s4109 Capsella rubella HOM05D000724 ORTHO05D000755 3.2e-06 57.0 173 29.5
Gorai.009G107500 Gossypium raimondii HOM05D000724 ORTHO05D000755 3.2e-06 57.0 117 32.5
PSO339G0678 Papaver somniferum HOM05D000724 ORTHO05D000755 3.2e-06 57.0 112 33.0
PSO384G4188 Papaver somniferum HOM05D000724 ORTHO05D000755 3.2e-06 57.0 112 33.0
Peaxi162Scf00270g00419 Petunia axillaris HOM05D000724 ORTHO05D000755 3.2e-06 57.0 132 31.1
RcHm_v2.0_Chr5g0058801 Rosa chinensis HOM05D000724 ORTHO05D000755 3.2e-06 57.0 198 29.3
Sp6g22260 Schrenkiella parvula HOM05D000724 ORTHO05D000755 3.2e-06 57.0 191 28.8
ATR0165G014 Amborella trichopoda HOM05D000724 ORTHO05D000755 4.2e-06 56.6 112 33.9
AT1G52150 Arabidopsis thaliana HOM05D000724 ORTHO05D000755 4.2e-06 56.6 173 29.5
AT5G60690 Arabidopsis thaliana HOM05D000724 ORTHO05D000755 4.2e-06 56.6 193 28.5
BcaB08g36371 Brassica carinata HOM05D000724 ORTHO05D000755 4.2e-06 56.6 192 28.1
A10p17930 Brassica napus HOM05D000724 ORTHO05D000755 4.2e-06 56.6 193 28.5
BraA10t43868Z Brassica rapa HOM05D000724 ORTHO05D000755 4.2e-06 56.6 193 28.5
CARHR042280 Cardamine hirsuta HOM05D000724 ORTHO05D000755 4.2e-06 56.6 173 29.5
ClCG01G013660 Citrullus lanatus HOM05D000724 ORTHO05D000755 4.2e-06 56.6 169 27.8
Duzib170G0910 Durio zibethinus HOM05D000724 ORTHO05D000755 4.2e-06 56.6 191 28.3
Gohir.D08G215800 Gossypium hirsutum HOM05D000724 ORTHO05D000755 4.2e-06 56.6 169 27.8
Gorai.004G229400 Gossypium raimondii HOM05D000724 ORTHO05D000755 4.2e-06 56.6 169 27.8
Lj3g0003378 Lotus japonicus HOM05D000724 ORTHO05D000755 4.2e-06 56.6 194 28.9
Nn8g39109 Nelumbo nucifera HOM05D000724 ORTHO05D000755 4.2e-06 56.6 186 28.5
Oeu040085.1 Olea europaea HOM05D000724 ORTHO05D000755 4.2e-06 56.6 118 33.9
Sabra09G0007500 Salix brachista HOM05D000724 ORTHO05D000755 4.2e-06 56.6 182 28.0
Sed0002665 Sechium edule HOM05D000724 ORTHO05D000755 4.2e-06 56.6 195 28.7
TWI79G0356 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 4.2e-06 56.6 195 28.2
Actinidia03725 Actinidia chinensis HOM05D000724 ORTHO05D000755 5.5e-06 56.2 193 28.5
Ca_19264_v3 Cicer arietinum L. HOM05D000724 ORTHO05D000755 5.5e-06 56.2 187 29.4
MELO3C025774.2 Cucumis melo HOM05D000724 ORTHO05D000755 5.5e-06 56.2 174 29.3
Solyc11g069470.3 Solanum lycopersicum HOM05D000724 ORTHO05D000755 5.5e-06 56.2 112 33.9
Sopen11g028190 Solanum pennellii HOM05D000724 ORTHO05D000755 5.5e-06 56.2 112 33.9
PGSC0003DMG401008054 Solanum tuberosum HOM05D000724 ORTHO05D000755 5.5e-06 56.2 112 33.9
TWI09G1143 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 5.5e-06 56.2 118 33.1
TWI53G2086 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 5.5e-06 56.2 118 33.1
Aa31LG10G2740 Aethionema arabicum HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
Ah.01g002970 Amaranthus hybridus HOM05D000724 ORTHO05D000755 7.2e-06 55.8 166 29.5
BcaB04g17167 Brassica carinata HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
BcaC01g01309 Brassica carinata HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 30.1
BcaC08g43371 Brassica carinata HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
A06p02020 Brassica napus HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
C06p07390 Brassica napus HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
BolC6t35828H Brassica oleracea HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
ClCG02G021180 Citrullus lanatus HOM05D000724 ORTHO05D000755 7.2e-06 55.8 174 28.7
MELO3C004888.2 Cucumis melo HOM05D000724 ORTHO05D000755 7.2e-06 55.8 171 28.1
Glyma.11G145800 Glycine max HOM05D000724 ORTHO05D000755 7.2e-06 55.8 168 29.8
Lalb_Chr24g0394661 Lupinus albus HOM05D000724 ORTHO05D000755 7.2e-06 55.8 190 28.4
Nitab4.5_0003131g0030 Nicotiana tabacum HOM05D000724 ORTHO05D000755 7.2e-06 55.8 112 33.9
Nitab4.5_0004624g0050 Nicotiana tabacum HOM05D000724 ORTHO05D000755 7.2e-06 55.8 112 33.9
Peaxi162Scf00267g00059 Petunia axillaris HOM05D000724 ORTHO05D000755 7.2e-06 55.8 134 31.3
Sp1g38700 Schrenkiella parvula HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 29.5
SEGI_00526 Sequoiadendron giganteum HOM05D000724 ORTHO05D000755 7.2e-06 55.8 112 33.9
THA.LOC104817963 Tarenaya hassleriana HOM05D000724 ORTHO05D000755 7.2e-06 55.8 173 30.1
Ah.01g014300 Amaranthus hybridus HOM05D000724 ORTHO05D000755 9.4e-06 55.5 193 29.5
Thhalv10011238m.g Eutrema salsugineum HOM05D000724 ORTHO05D000755 9.4e-06 55.5 173 29.5
Lalb_Chr14g0374631 Lupinus albus HOM05D000724 ORTHO05D000755 9.4e-06 55.5 190 28.4
Lalb_Chr19g0137211 Lupinus albus HOM05D000724 ORTHO05D000755 9.4e-06 55.5 173 28.3
MBI02_g31763_MAGBIO Magnolia biondii HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 33.9
Manes.14G122900 Manihot esculenta HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 33.9
Nn3g20228 Nelumbo nucifera HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 33.0
Solyc02g024070.3 Solanum lycopersicum HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 32.1
Sopen02g006800 Solanum pennellii HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 32.1
THA.LOC104812688 Tarenaya hassleriana HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 34.8
TPR.G15561 Trifolium pratense HOM05D000724 ORTHO05D000755 9.4e-06 55.5 188 29.3
HPP92_013993 Vanilla planifolia HOM05D000724 ORTHO05D000755 9.4e-06 55.5 126 32.5
GSVIVG01016272001 Vitis vinifera HOM05D000724 ORTHO05D000755 9.4e-06 55.5 112 33.0


User provided reference genes

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