Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015143 Daucus carota HOM05D004946 ORTHO05D006101 1.7e-132 476.1 248 100.0
Dinv15680 Davidia involucrata HOM05D004946 ORTHO05D006101 1.5e-37 160.6 339 35.7
Actinidia18931 Actinidia chinensis HOM05D004946 ORTHO05D006101 1.1e-35 154.5 339 36.6
Hma1.2p1_0701F.1_g205890 Hydrangea macrophylla HOM05D004946 ORTHO05D006101 3.0e-33 146.4 341 37.5
Atru.chr9.855 Acer truncatum HOM05D004946 ORTHO05D006101 1.1e-32 144.4 337 36.8
Prupe.5G221700 Prunus persica HOM05D004946 ORTHO05D006101 3.3e-32 142.9 334 36.8
Hma1.2p1_2409F.1_g321510 Hydrangea macrophylla HOM05D004946 ORTHO05D006101 3.7e-31 139.4 341 37.0
Dinv28107 Davidia involucrata HOM05D004946 ORTHO05D006101 1.5e-29 134.0 337 34.1
MD14G1227000 Malus domestica HOM05D004946 ORTHO05D006101 2.0e-29 133.7 339 36.6
Actinidia35090 Actinidia chinensis HOM05D004946 ORTHO05D006101 7.6e-29 131.7 223 40.4
QL10p025417 Quercus lobata HOM05D004946 ORTHO05D006101 1.3e-28 131.0 336 34.8
Cfa019764 Carpinus fangiana HOM05D004946 ORTHO05D006101 4.9e-28 129.0 343 34.7
DCAR_023206 Daucus carota HOM05D004946 ORTHO05D006101 9.3e-27 124.8 335 35.5
Thecc.03G035700 Theobroma cacao HOM05D004946 ORTHO05D006101 9.3e-27 124.8 338 34.0
CSS0004173 Camellia sinensis var. sinensis HOM05D004946 ORTHO05D006101 1.2e-26 124.4 340 32.6
COL.COLO4_11303 Corchorus olitorius HOM05D004946 ORTHO05D006101 2.7e-26 123.2 336 35.4
Haze_18683 Corylus avellana HOM05D004946 ORTHO05D006101 6.1e-26 122.1 342 33.3
Oeu064714.1 Olea europaea HOM05D004946 ORTHO05D006101 7.9e-26 121.7 340 34.1
Nn3g17855 Nelumbo nucifera HOM05D004946 ORTHO05D006101 1.0e-25 121.3 320 34.1
PGR044G1576 Punica granatum HOM05D004946 ORTHO05D006101 3.9e-25 119.4 338 34.0
Potri.012G056200 Populus trichocarpa HOM05D004946 ORTHO05D006101 6.7e-25 118.6 338 34.3
Gohir.D08G105600 Gossypium hirsutum HOM05D004946 ORTHO05D006101 1.6e-23 114.0 326 35.0
Duzib084G0074 Durio zibethinus HOM05D004946 ORTHO05D006101 2.2e-23 113.6 339 34.8
Gorai.006G060600 Gossypium raimondii HOM05D004946 ORTHO05D006101 2.8e-23 113.2 337 33.2
Gohir.D09G049200 Gossypium hirsutum HOM05D004946 ORTHO05D006101 3.7e-23 112.8 337 32.9
FvH4_5g12080 Fragaria vesca HOM05D004946 ORTHO05D006101 2.4e-22 110.2 328 34.8
MSTRG.11071 Avicennia marina HOM05D004946 ORTHO05D006101 3.1e-22 109.8 338 33.1
FAN08G1246 Fragaria x ananassa HOM05D004946 ORTHO05D006101 3.1e-22 109.8 328 33.5
Gohir.A09G048000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 3.1e-22 109.8 337 32.6
FAN18G2620 Fragaria x ananassa HOM05D004946 ORTHO05D006101 9.0e-22 108.2 335 34.0
FAN18G3139 Fragaria x ananassa HOM05D004946 ORTHO05D006101 9.0e-22 108.2 328 34.5
Lalb_Chr05g0222491 Lupinus albus HOM05D004946 ORTHO05D006101 1.2e-21 107.8 342 32.7
Rhsim12G0143100 Rhododendron simsii HOM05D004946 ORTHO05D006101 7.7e-21 105.1 343 32.9
Sabra12G0039900 Salix brachista HOM05D004946 ORTHO05D006101 5.0e-20 102.4 374 30.2
RcHm_v2.0_Chr7g0185491 Rosa chinensis HOM05D004946 ORTHO05D006101 2.5e-19 100.1 324 33.3
Gorai.004G113500 Gossypium raimondii HOM05D004946 ORTHO05D006101 3.2e-19 99.8 337 32.6
Manes.01G011100 Manihot esculenta HOM05D004946 ORTHO05D006101 5.5e-19 99.0 335 31.3
Ciclev10020493m.g Citrus clementina HOM05D004946 ORTHO05D006101 1.2e-18 97.8 338 31.1
PGSC0003DMG401005635 Solanum tuberosum HOM05D004946 ORTHO05D006101 1.2e-18 97.8 335 31.0
Oeu056801.1 Olea europaea HOM05D004946 ORTHO05D006101 6.1e-18 95.5 327 31.5
Cc04_g07080 Coffea canephora HOM05D004946 ORTHO05D006101 7.9e-18 95.1 339 30.7
FAN04G0770 Fragaria x ananassa HOM05D004946 ORTHO05D006101 7.9e-18 95.1 328 32.9
CANSAT80G1182 Cannabis sativa HOM05D004946 ORTHO05D006101 1.0e-17 94.7 337 31.2
Gohir.A08G095000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 1.4e-17 94.4 309 32.0
AUR62038115 Chenopodium quinoa HOM05D004946 ORTHO05D006101 1.8e-17 94.0 336 31.5
AUR62021632 Chenopodium quinoa HOM05D004946 ORTHO05D006101 8.8e-17 91.7 316 30.7
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 2.5e-16 90.1 190 37.4
CiPaw.16G086800 Carya illinoinensis HOM05D004946 ORTHO05D006101 3.3e-16 89.7 342 30.1
arahy.Tifrunner.gnm1.ann1.G56NCJ Arachis hypogaea HOM05D004946 ORTHO05D006101 4.3e-16 89.4 328 29.9
MELO3C002087.2 Cucumis melo HOM05D004946 ORTHO05D006101 7.4e-16 88.6 341 30.2
Nn4g23854 Nelumbo nucifera HOM05D004946 ORTHO05D006101 7.4e-16 88.6 338 30.2
Sc12g0007670 Simmondsia chinensis HOM05D004946 ORTHO05D006101 9.7e-16 88.2 335 30.1
Peaxi162Scf00634g00318 Petunia axillaris HOM05D004946 ORTHO05D006101 1.3e-15 87.8 279 30.5
Sed0008793 Sechium edule HOM05D004946 ORTHO05D006101 1.7e-15 87.4 203 33.0
vmacro16446 Vaccinium macrocarpon HOM05D004946 ORTHO05D006101 2.2e-15 87.0 341 29.6
CsaV3_1G006630 Cucumis sativus L. HOM05D004946 ORTHO05D006101 2.8e-15 86.7 341 30.2
AUR62008463 Chenopodium quinoa HOM05D004946 ORTHO05D006101 4.8e-15 85.9 316 30.1
Migut.I00881 Erythranthe guttata HOM05D004946 ORTHO05D006101 4.8e-15 85.9 355 30.7
Lalb_Chr09g0331081 Lupinus albus HOM05D004946 ORTHO05D006101 4.8e-15 85.9 334 29.6
Lj4g0022250 Lotus japonicus HOM05D004946 ORTHO05D006101 1.4e-14 84.3 337 29.1
ECA238G2506 Erigeron canadensis HOM05D004946 ORTHO05D006101 1.8e-14 84.0 342 29.2
CAN.G1889.4 Capsicum annuum HOM05D004946 ORTHO05D006101 2.4e-14 83.6 338 28.7
Nitab4.5_0009306g0010 Nicotiana tabacum HOM05D004946 ORTHO05D006101 5.3e-14 82.4 321 29.0
Medtr8g104260 Medicago truncatula HOM05D004946 ORTHO05D006101 2.2e-12 77.0 337 29.1
arahy.Tifrunner.gnm1.ann1.X2WJJP Arachis hypogaea HOM05D004946 ORTHO05D006101 6.5e-12 75.5 324 29.6
FAN13G1851 Fragaria x ananassa HOM05D004946 ORTHO05D006101 6.5e-12 75.5 328 30.8
ClCG04G011130 Citrullus lanatus HOM05D004946 ORTHO05D006101 1.1e-11 74.7 324 29.3
PSO478G0599 Papaver somniferum HOM05D004946 ORTHO05D006101 1.4e-11 74.3 341 31.4
HanXRQChr06g0184711 Helianthus annuus HOM05D004946 ORTHO05D006101 9.4e-11 71.6 214 33.2
EL10Ac5g11063 Beta vulgaris HOM05D004946 ORTHO05D006101 1.6e-10 70.9 186 35.5
Nitab4.5_0000974g0090 Nicotiana tabacum HOM05D004946 ORTHO05D006101 3.6e-10 69.7 335 28.1
Peaxi162Scf00015g01034 Petunia axillaris HOM05D004946 ORTHO05D006101 3.6e-10 69.7 233 30.0
Glyma.08G041600 Glycine max HOM05D004946 ORTHO05D006101 6.1e-10 68.9 339 28.9
Gohir.A11G277050 Gossypium hirsutum HOM05D004946 ORTHO05D006101 2.3e-09 67.0 83 55.4
PSO017G0469 Papaver somniferum HOM05D004946 ORTHO05D006101 3.9e-09 66.2 343 28.3
Psat7g010600 Pisum sativum HOM05D004946 ORTHO05D006101 5.1e-09 65.9 234 34.2
Gohir.D05G109701 Gossypium hirsutum HOM05D004946 ORTHO05D006101 2.0e-08 63.9 155 39.4
Gohir.D08G202000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 2.0e-08 63.9 155 39.4
BcaC08g45619 Brassica carinata HOM05D004946 ORTHO05D006101 3.3e-08 63.2 340 28.5
Gohir.D11G132850 Gossypium hirsutum HOM05D004946 ORTHO05D006101 3.3e-08 63.2 155 39.4
Ah.11g048200 Amaranthus hybridus HOM05D004946 ORTHO05D006101 4.4e-08 62.8 328 27.4
Ca_25442_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 5.7e-08 62.4 243 33.7
arahy.Tifrunner.gnm1.ann1.N3S6I2 Arachis hypogaea HOM05D004946 ORTHO05D006101 9.7e-08 61.6 216 34.7
Eucgr.K02226 Eucalyptus grandis HOM05D004946 ORTHO05D006101 9.7e-08 61.6 190 36.3
arahy.Tifrunner.gnm1.ann1.94ZJ0E Arachis hypogaea HOM05D004946 ORTHO05D006101 1.7e-07 60.8 241 32.4
Glyma.10G040800 Glycine max HOM05D004946 ORTHO05D006101 1.7e-07 60.8 233 32.2
Lsat_1_v5_gn_2_12261 Lactuca sativa HOM05D004946 ORTHO05D006101 1.7e-07 60.8 186 31.7
BcaNung06927 Brassica carinata HOM05D004946 ORTHO05D006101 2.2e-07 60.5 47 72.3
BcaB03g15090 Brassica carinata HOM05D004946 ORTHO05D006101 2.8e-07 60.1 55 67.3
Thhalv10018702m.g Eutrema salsugineum HOM05D004946 ORTHO05D006101 2.8e-07 60.1 55 67.3
TWI60G1440 Tripterygium wilfordii HOM05D004266 ORTHO05D005151 2.8e-07 60.1 63 52.4
CDE06G2845 Ceratophyllum demersum HOM05D004946 ORTHO05D006101 3.7e-07 59.7 41 75.6
Glyma.05G234300 Glycine max HOM05D004946 ORTHO05D006101 4.8e-07 59.3 155 38.1
C06p33810 Brassica napus HOM05D004946 ORTHO05D006101 6.3e-07 58.9 340 27.9
Aa31LG4G4160 Aethionema arabicum HOM05D004946 ORTHO05D006101 8.2e-07 58.5 71 56.3
CDE06G1062 Ceratophyllum demersum HOM05D004946 ORTHO05D006101 1.8e-06 57.4 217 30.4
Gorai.010G131000 Gossypium raimondii HOM05D004266 ORTHO05D005151 1.8e-06 57.4 50 62.0
MBI02_g11379_MAGBIO Magnolia biondii HOM05D004946 ORTHO05D006101 2.4e-06 57.0 153 34.0
Phvul.007G154000 Phaseolus vulgaris HOM05D004946 ORTHO05D006101 2.4e-06 57.0 208 34.6
Aqoxy3G00287 Aquilegia oxysepala HOM05D004946 ORTHO05D006101 3.1e-06 56.6 282 29.1
A07p39700 Brassica napus HOM05D004946 ORTHO05D006101 3.1e-06 56.6 55 65.5
BraA07t31519Z Brassica rapa HOM05D004946 ORTHO05D006101 3.1e-06 56.6 332 28.9
Thecc.08G196800 Theobroma cacao HOM05D004266 ORTHO05D005151 3.1e-06 56.6 45 62.2
Ca_15108_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 4.1e-06 56.2 161 35.4
TWI34G1000 Tripterygium wilfordii HOM05D004266 ORTHO05D005151 4.1e-06 56.2 52 55.8
Lalb_Chr02g0141671 Lupinus albus HOM05D004266 ORTHO05D005151 5.3e-06 55.8 48 56.2
unitig_8.g3895 Utricularia gibba HOM05D004946 ORTHO05D006101 5.3e-06 55.8 278 29.1
Ciclev10000749m.g Citrus clementina HOM05D004266 ORTHO05D005151 7.0e-06 55.5 40 67.5
Duzib211G0120 Durio zibethinus HOM05D004266 ORTHO05D005151 7.0e-06 55.5 50 60.0
Duzib116G0903 Durio zibethinus HOM05D004266 ORTHO05D005151 9.1e-06 55.1 42 64.3
Manes.02G186700 Manihot esculenta HOM05D004266 ORTHO05D005151 9.1e-06 55.1 42 64.3


User provided reference genes

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