Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015090 Daucus carota HOM05D002631 ORTHO05D002861 7.0e-72 273.9 140 100.0
DCAR_021775 Daucus carota HOM05D002631 ORTHO05D002861 7.9e-23 110.9 129 49.6
Hma1.2p1_0279F.1_g112600 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 8.1e-20 100.9 154 40.3
Prupe.3G303900 Prunus persica HOM05D002631 ORTHO05D002861 4.0e-19 98.6 141 42.6
Migut.F00077 Erythranthe guttata HOM05D002631 ORTHO05D002861 2.6e-18 95.9 132 45.5
Hma1.2p1_2105F.1_g314170 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 7.6e-18 94.4 151 39.1
DCAR_011315 Daucus carota HOM05D002631 ORTHO05D002861 1.3e-17 93.6 119 50.4
Hma1.2p1_1278F.1_g272420 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.3e-17 93.6 151 38.4
Manes.17G104100 Manihot esculenta HOM05D002631 ORTHO05D002861 2.2e-17 92.8 140 45.0
Manes.15G159300 Manihot esculenta HOM05D002631 ORTHO05D002861 9.3e-16 87.4 151 37.7
Peaxi162Scf00700g00133 Petunia axillaris HOM05D002631 ORTHO05D002861 1.2e-15 87.0 142 39.4
Lj7A608T54 Lonicera japonica HOM05D002631 ORTHO05D002861 2.7e-15 85.9 157 35.0
CiPaw.04G035400 Carya illinoinensis HOM05D002631 ORTHO05D002861 3.0e-14 82.4 150 34.0
Migut.K01455 Erythranthe guttata HOM05D002631 ORTHO05D002861 3.9e-14 82.0 129 39.5
Sed0001821 Sechium edule HOM05D002631 ORTHO05D002861 5.1e-14 81.6 135 37.0
MELO3C014870.2 Cucumis melo HOM05D002631 ORTHO05D002861 6.7e-14 81.3 138 39.9
Oeu011958.2 Olea europaea HOM05D002631 ORTHO05D002861 6.7e-14 81.3 151 35.8
CSS0020364 Camellia sinensis var. sinensis HOM05D002631 ORTHO05D002861 8.7e-14 80.9 152 34.9
TAR371G1118 Trochodendron aralioides HOM05D002631 ORTHO05D002861 1.5e-13 80.1 147 35.4
CsaV3_3G027170 Cucumis sativus L. HOM05D002631 ORTHO05D002861 1.9e-13 79.7 138 39.1
Gohir.D09G035700 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.9e-13 79.7 131 40.5
Gorai.006G040600 Gossypium raimondii HOM05D002631 ORTHO05D002861 1.9e-13 79.7 131 40.5
Thecc.04G033600 Theobroma cacao HOM05D002631 ORTHO05D002861 3.3e-13 79.0 153 36.6
Cfa007243 Carpinus fangiana HOM05D002631 ORTHO05D002861 4.3e-13 78.6 154 37.0
MSTRG.3083 Avicennia marina HOM05D002631 ORTHO05D002861 5.7e-13 78.2 152 38.8
Gohir.A09G034900 Gossypium hirsutum HOM05D002631 ORTHO05D002861 5.7e-13 78.2 133 39.8
Duzib147G0551 Durio zibethinus HOM05D002631 ORTHO05D002861 9.6e-13 77.4 152 34.9
Sabra16G0213400 Salix brachista HOM05D002631 ORTHO05D002861 2.1e-12 76.3 153 37.3
Haze_14856 Corylus avellana HOM05D002631 ORTHO05D002861 2.8e-12 75.9 154 36.4
Potri.001G332500 Populus trichocarpa HOM05D002631 ORTHO05D002861 2.8e-12 75.9 153 35.9
CiPaw.03G053800 Carya illinoinensis HOM05D002631 ORTHO05D002861 3.7e-12 75.5 149 35.6
Duzib264G0548 Durio zibethinus HOM05D002631 ORTHO05D002861 3.7e-12 75.5 152 34.9
SalBow4G0924 Salvia bowleyana HOM05D002631 ORTHO05D002861 3.7e-12 75.5 145 35.2
HanXRQChr09g0256151 Helianthus annuus HOM05D002631 ORTHO05D002861 4.8e-12 75.1 141 39.7
SalBow4G2864 Salvia bowleyana HOM05D002631 ORTHO05D002861 4.8e-12 75.1 145 35.2
COL.COLO4_17171 Corchorus olitorius HOM05D002631 ORTHO05D002861 6.3e-12 74.7 157 34.4
Rhsim10G0007400 Rhododendron simsii HOM05D002631 ORTHO05D002861 1.1e-11 73.9 155 35.5
TPR.G38258 Trifolium pratense HOM05D002631 ORTHO05D002861 1.1e-11 73.9 146 37.0
Actinidia04441 Actinidia chinensis HOM05D002631 ORTHO05D002861 1.4e-11 73.6 158 32.3
QL02p071781 Quercus lobata HOM05D002631 ORTHO05D002861 1.4e-11 73.6 173 31.8
Glyma.16G058500 Glycine max HOM05D002631 ORTHO05D002861 1.8e-11 73.2 147 37.4
Glyma.19G088700 Glycine max HOM05D002631 ORTHO05D002861 1.8e-11 73.2 144 36.1
Sed0018875 Sechium edule HOM05D002631 ORTHO05D002861 3.1e-11 72.4 135 37.8
VMungo1383G3513 Vigna mungo HOM05D002631 ORTHO05D002861 3.1e-11 72.4 146 34.2
CAN.G1751.2 Capsicum annuum HOM05D002631 ORTHO05D002861 4.1e-11 72.0 139 36.7
ECA232G3368 Erigeron canadensis HOM05D000185 ORTHO05D000105 4.1e-11 72.0 112 42.9
Lj1g0010837 Lotus japonicus HOM05D002631 ORTHO05D002861 4.1e-11 72.0 148 35.8
TWI12G0788 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 4.1e-11 72.0 129 39.5
Phvul.001G095300 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 5.3e-11 71.6 147 34.7
MD09G1013200 Malus domestica HOM05D002631 ORTHO05D002861 6.9e-11 71.2 136 36.8
FAN05G0255 Fragaria x ananassa HOM05D002631 ORTHO05D002861 9.0e-11 70.9 147 34.0
TWI56G0933 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 9.0e-11 70.9 129 37.2
HanXRQChr15g0486931 Helianthus annuus HOM05D002631 ORTHO05D002861 1.2e-10 70.5 134 35.1
Medtr7g029620 Medicago truncatula HOM05D002631 ORTHO05D002861 1.2e-10 70.5 149 32.9
Actinidia30886 Actinidia chinensis HOM05D002631 ORTHO05D002861 1.5e-10 70.1 152 34.2
MBI07_g31942_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 2.0e-10 69.7 153 33.3
MD17G1013900 Malus domestica HOM05D002631 ORTHO05D002861 2.0e-10 69.7 136 36.8
Ciclev10016522m.g Citrus clementina HOM05D002631 ORTHO05D002861 2.6e-10 69.3 156 34.0
Sopen03g001040 Solanum pennellii HOM05D002631 ORTHO05D002861 2.6e-10 69.3 140 35.7
SGA_v2.0_scaffold154G37166 Striga asiatica HOM05D002631 ORTHO05D002861 2.6e-10 69.3 128 36.7
Solyc03g005030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 3.4e-10 68.9 140 35.7
ECA238G4360 Erigeron canadensis HOM05D002631 ORTHO05D002861 4.5e-10 68.6 67 53.7
Atru.chr6.2535 Acer truncatum HOM05D002631 ORTHO05D002861 5.9e-10 68.2 166 31.3
vmacro18333 Vaccinium macrocarpon HOM05D002631 ORTHO05D002861 5.9e-10 68.2 149 33.6
Aqoxy3G01502 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 7.6e-10 67.8 150 32.0
Dinv10972 Davidia involucrata HOM05D002631 ORTHO05D002861 7.6e-10 67.8 144 34.0
FvH4_6g53190 Fragaria vesca HOM05D002631 ORTHO05D002861 7.6e-10 67.8 147 34.0
FAN14G5847 Fragaria x ananassa HOM05D002631 ORTHO05D002861 7.6e-10 67.8 147 34.0
PGSC0003DMG400013426 Solanum tuberosum HOM05D002631 ORTHO05D002861 7.6e-10 67.8 140 35.0
RcHm_v2.0_Chr2g0175231 Rosa chinensis HOM05D002631 ORTHO05D002861 1.0e-09 67.4 150 36.0
Oeu035217.1 Olea europaea HOM05D002631 ORTHO05D002861 1.3e-09 67.0 145 35.2
Psat1g085600 Pisum sativum HOM05D002631 ORTHO05D002861 1.7e-09 66.6 141 34.0
FAN02G3740 Fragaria x ananassa HOM05D002631 ORTHO05D002861 2.2e-09 66.2 147 33.3
Gohir.D04G077800 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.2e-09 66.2 153 31.4
Gorai.012G087600 Gossypium raimondii HOM05D002631 ORTHO05D002861 2.2e-09 66.2 153 31.4
Actinidia36186 Actinidia chinensis HOM05D002631 ORTHO05D002861 2.9e-09 65.9 152 33.6
ClCG05G013370 Citrullus lanatus HOM05D002631 ORTHO05D002861 2.9e-09 65.9 141 38.3
Gohir.A05G339300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.9e-09 65.9 156 30.8
Ca_04425_v3 Cicer arietinum L. HOM05D002631 ORTHO05D002861 3.8e-09 65.5 141 31.9
HanXRQChr15g0474921 Helianthus annuus HOM05D002631 ORTHO05D002861 3.8e-09 65.5 107 38.3
Nitab4.5_0000559g0430 Nicotiana tabacum HOM05D002631 ORTHO05D002861 3.8e-09 65.5 147 36.7
Nn3g16504 Nelumbo nucifera HOM05D002631 ORTHO05D002861 5.0e-09 65.1 151 31.1
MSTRG.24087 Avicennia marina HOM05D002631 ORTHO05D002861 1.1e-08 63.9 149 32.2
HanXRQChr07g0198291 Helianthus annuus HOM05D002631 ORTHO05D002861 1.1e-08 63.9 80 50.0
Psat7g264080 Pisum sativum HOM05D002631 ORTHO05D002861 1.1e-08 63.9 142 34.5
Dinv33351 Davidia involucrata HOM05D000172 ORTHO05D000781 1.4e-08 63.5 107 39.3
PSO017G1183 Papaver somniferum HOM05D002631 ORTHO05D002861 1.9e-08 63.2 140 35.7
Aqoxy5G03422 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 2.5e-08 62.8 151 29.8
FAN09G0528 Fragaria x ananassa HOM05D002631 ORTHO05D002861 3.2e-08 62.4 145 35.2
Lalb_Chr21g0317531 Lupinus albus HOM05D002631 ORTHO05D002861 3.2e-08 62.4 142 35.9
Duzib187G0830 Durio zibethinus HOM05D002631 ORTHO05D002861 4.2e-08 62.0 153 34.6
GSVIVG01001809001 Vitis vinifera HOM05D002631 ORTHO05D002861 4.2e-08 62.0 69 47.8
Cc07_g00670 Coffea canephora HOM05D002631 ORTHO05D002861 5.5e-08 61.6 149 35.6
Gohir.D07G234300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 5.5e-08 61.6 161 30.4
TAR629G0052 Trochodendron aralioides HOM05D002631 ORTHO05D002861 5.5e-08 61.6 151 30.5
Cpa.g.c32694.2 Carica papaya HOM05D002631 ORTHO05D002861 9.3e-08 60.8 153 31.4
Lsat_1_v5_gn_0_30021 Lactuca sativa HOM05D002631 ORTHO05D002861 9.3e-08 60.8 118 41.5
Medtr6g023580 Medicago truncatula HOM05D002631 ORTHO05D002861 9.3e-08 60.8 141 34.8
QL03p054083 Quercus lobata HOM05D002631 ORTHO05D002861 9.3e-08 60.8 152 33.6
Gorai.001G269900 Gossypium raimondii HOM05D002631 ORTHO05D002861 1.2e-07 60.5 161 29.8
Nn4g22361 Nelumbo nucifera HOM05D002631 ORTHO05D002861 1.2e-07 60.5 151 31.1
HPP92_023191 Vanilla planifolia HOM05D002631 ORTHO05D002861 1.6e-07 60.1 147 34.7
CANSAT64G0464 Cannabis sativa HOM05D002631 ORTHO05D002861 2.1e-07 59.7 149 30.2
Gohir.A07G227200 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.1e-07 59.7 161 29.8
Glyma.19G074200 Glycine max HOM05D002631 ORTHO05D002861 2.7e-07 59.3 144 29.9
arahy.Tifrunner.gnm1.ann1.Q8Q4RG Arachis hypogaea HOM05D002631 ORTHO05D002861 3.6e-07 58.9 129 35.7
CAN.G473.87 Capsicum annuum HOM05D002631 ORTHO05D002861 3.6e-07 58.9 146 35.6
Oeu013645.3 Olea europaea HOM05D000172 ORTHO05D000781 3.6e-07 58.9 156 31.4
Nitab4.5_0005161g0010 Nicotiana tabacum HOM05D002631 ORTHO05D002861 6.1e-07 58.2 145 35.2
Phvul.004G055100 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 6.1e-07 58.2 144 32.6
TPR.G7520 Trifolium pratense HOM05D002631 ORTHO05D002861 6.1e-07 58.2 142 33.8
HanXRQChr17g0550131 Helianthus annuus HOM05D002631 ORTHO05D002861 7.9e-07 57.8 95 38.9
THA.LOC104805334 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 7.9e-07 57.8 145 31.0
Thhalv10004813m.g Eutrema salsugineum HOM05D002631 ORTHO05D002861 1.0e-06 57.4 141 31.9
THA.LOC104825613 Tarenaya hassleriana HOM05D002631 ORTHO05D002861 1.0e-06 57.4 147 31.3
BcaB06g27569 Brassica carinata HOM05D002631 ORTHO05D002861 1.3e-06 57.0 135 33.3
Lj2g0026031 Lotus japonicus HOM05D002631 ORTHO05D002861 1.3e-06 57.0 136 32.4
arahy.Tifrunner.gnm1.ann1.B4KLFS Arachis hypogaea HOM05D002631 ORTHO05D002861 1.8e-06 56.6 129 34.9
Potri.010G058700 Populus trichocarpa HOM05D002631 ORTHO05D002861 1.8e-06 56.6 151 30.5
ECA246G3938 Erigeron canadensis HOM05D002631 ORTHO05D002861 2.3e-06 56.2 132 36.4
Glyma.05G076300 Glycine max HOM05D002631 ORTHO05D002861 2.3e-06 56.2 145 31.7
VMungo0464G1570 Vigna mungo HOM05D002631 ORTHO05D002861 2.3e-06 56.2 145 31.0
PGR142G2012 Punica granatum HOM05D002631 ORTHO05D002861 3.0e-06 55.8 131 33.6
Eucgr.I01656 Eucalyptus grandis HOM05D002631 ORTHO05D002861 3.9e-06 55.5 157 31.8
HanXRQChr14g0450671 Helianthus annuus HOM05D002631 ORTHO05D002861 3.9e-06 55.5 76 46.1
Potri.008G176300 Populus trichocarpa HOM05D002631 ORTHO05D002861 3.9e-06 55.5 147 31.3
Thhalv10028135m.g Eutrema salsugineum HOM05D002631 ORTHO05D002861 5.1e-06 55.1 142 33.1
QL03p053884 Quercus lobata HOM05D002631 ORTHO05D002861 6.7e-06 54.7 144 30.6
Lsat_1_v5_gn_2_94100 Lactuca sativa HOM05D002631 ORTHO05D002861 8.7e-06 54.3 131 32.8
Lalb_Chr14g0363261 Lupinus albus HOM05D002631 ORTHO05D002861 8.7e-06 54.3 147 33.3
Sp3g00210 Schrenkiella parvula HOM05D002631 ORTHO05D002861 8.7e-06 54.3 130 30.8


User provided reference genes

Program Settings