Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004504 Daucus carota HOM05D058963 ORTHO05D002543 5.7e-86 320.9 160 100.0
DCAR_015047 Daucus carota HOM05D058963 ORTHO05D002543 5.7e-86 320.9 160 100.0
DCAR_007871 Daucus carota HOM05D002431 ORTHO05D002543 2.2e-21 106.3 89 69.7
DCAR_022760 Daucus carota HOM05D001944 ORTHO05D002405 1.1e-15 87.4 53 81.1
DCAR_003887 Daucus carota HOM05D002431 ORTHO05D002543 8.4e-13 77.8 67 65.7
Actinidia32345 Actinidia chinensis HOM05D002431 ORTHO05D002543 1.5e-09 67.0 70 58.6
Dinv32212 Davidia involucrata HOM05D002431 ORTHO05D002543 1.9e-09 66.6 74 56.8
CSS0004223 Camellia sinensis var. sinensis HOM05D002431 ORTHO05D002543 5.7e-09 65.1 79 51.9
CSS0041267 Camellia sinensis var. sinensis HOM05D002431 ORTHO05D002543 7.4e-09 64.7 82 51.2
DCAR_029202 Daucus carota HOM05D000015 ORTHO05D175433 1.6e-08 63.5 45 68.9
Lsat_1_v5_gn_7_27321 Lactuca sativa HOM05D002431 ORTHO05D002543 1.6e-08 63.5 80 50.0
Nn4g26635 Nelumbo nucifera HOM05D002431 ORTHO05D002543 1.6e-08 63.5 72 54.2
Sc17g0004790 Simmondsia chinensis HOM05D002431 ORTHO05D002543 1.6e-08 63.5 83 51.8
SalBow8G1983 Salvia bowleyana HOM05D002431 ORTHO05D002543 2.8e-08 62.8 74 52.7
Cc09_g08760 Coffea canephora HOM05D002431 ORTHO05D002543 3.7e-08 62.4 86 47.7
PGR083G0955 Punica granatum HOM05D002431 ORTHO05D002543 3.7e-08 62.4 71 56.3
Atru.chr10.1073 Acer truncatum HOM05D002431 ORTHO05D002543 4.8e-08 62.0 72 55.6
Rhsim13G0118000 Rhododendron simsii HOM05D002431 ORTHO05D002543 6.3e-08 61.6 78 48.7
GSVIVG01021550001 Vitis vinifera HOM05D002431 ORTHO05D002543 6.3e-08 61.6 62 61.3
Actinidia39591 Actinidia chinensis HOM05D002431 ORTHO05D002543 8.2e-08 61.2 70 54.3
Manes.17G074250 Manihot esculenta HOM05D002431 ORTHO05D002543 8.2e-08 61.2 65 58.5
vmacro03430 Vaccinium macrocarpon HOM05D002431 ORTHO05D002543 8.2e-08 61.2 70 52.9
Migut.M00879 Erythranthe guttata HOM05D002431 ORTHO05D002543 1.1e-07 60.8 75 53.3
HanXRQChr15g0481901 Helianthus annuus HOM05D002431 ORTHO05D002543 1.1e-07 60.8 80 48.8
Potri.001G358600 Populus trichocarpa HOM05D002431 ORTHO05D002543 1.4e-07 60.5 85 45.9
TWI09G0860 Tripterygium wilfordii HOM05D002431 ORTHO05D002543 1.4e-07 60.5 71 54.9
DCAR_027887 Daucus carota HOM05D002431 ORTHO05D002543 1.8e-07 60.1 65 56.9
SGA_v2.0_scaffold223G42825 Striga asiatica HOM05D002431 ORTHO05D002543 2.4e-07 59.7 72 52.8
MSTRG.16265 Avicennia marina HOM05D002431 ORTHO05D002543 3.1e-07 59.3 63 57.1
Oeu031315.1 Olea europaea HOM05D002431 ORTHO05D002543 3.1e-07 59.3 74 48.6
THA.LOC104812681 Tarenaya hassleriana HOM05D002431 ORTHO05D002543 3.1e-07 59.3 72 52.8
TAR629G2085 Trochodendron aralioides HOM05D002431 ORTHO05D002543 3.1e-07 59.3 75 46.7
CiPaw.09G119500 Carya illinoinensis HOM05D002431 ORTHO05D002543 4.1e-07 58.9 70 55.7
ClCG01G024900 Citrullus lanatus HOM05D002431 ORTHO05D002543 4.1e-07 58.9 72 52.8
Manes.15G125100 Manihot esculenta HOM05D002431 ORTHO05D002543 4.1e-07 58.9 64 57.8
Peaxi162Scf00045g02428 Petunia axillaris HOM05D002431 ORTHO05D002543 4.1e-07 58.9 71 52.1
BolC5t31654H Brassica oleracea HOM05D002431 ORTHO05D002543 5.3e-07 58.5 79 50.6
Ciclev10014853m.g Citrus clementina HOM05D002431 ORTHO05D002543 5.3e-07 58.5 70 55.7
ECA236G4122 Erigeron canadensis HOM05D002431 ORTHO05D002543 5.3e-07 58.5 66 56.1
TWI73G0305 Tripterygium wilfordii HOM05D002431 ORTHO05D002543 5.3e-07 58.5 63 55.6
Actinidia03347 Actinidia chinensis HOM05D002431 ORTHO05D002543 9.0e-07 57.8 80 48.8
CAN.G90.10 Capsicum annuum HOM05D002431 ORTHO05D002543 9.0e-07 57.8 74 50.0
Nn3g20327 Nelumbo nucifera HOM05D002431 ORTHO05D002543 9.0e-07 57.8 139 36.0
Peaxi162Scf00465g00066 Petunia axillaris HOM05D002431 ORTHO05D002543 1.5e-06 57.0 75 49.3
QL02p029395 Quercus lobata HOM05D002431 ORTHO05D002543 1.5e-06 57.0 68 50.0
Sed0000189 Sechium edule HOM05D002431 ORTHO05D002543 1.5e-06 57.0 71 52.1
A09p36140 Brassica napus HOM05D002431 ORTHO05D002543 2.0e-06 56.6 77 51.9
Cpa.g.sc17.51 Carica papaya HOM05D002431 ORTHO05D002543 2.0e-06 56.6 69 50.7
CsaV3_6G052050 Cucumis sativus L. HOM05D002431 ORTHO05D002543 2.0e-06 56.6 68 52.9
PSO541G1681 Papaver somniferum HOM05D002431 ORTHO05D002543 2.0e-06 56.6 78 50.0
Duzib160G0180 Durio zibethinus HOM05D002431 ORTHO05D002543 2.6e-06 56.2 70 50.0
Gohir.A05G146300 Gossypium hirsutum HOM05D002431 ORTHO05D002543 2.6e-06 56.2 70 50.0
Gohir.D05G148600 Gossypium hirsutum HOM05D002431 ORTHO05D002543 2.6e-06 56.2 70 50.0
Gorai.011G048100 Gossypium raimondii HOM05D002431 ORTHO05D002543 2.6e-06 56.2 70 47.1
QL05p055058 Quercus lobata HOM05D002431 ORTHO05D002543 2.6e-06 56.2 70 48.6
BcaC05g27063 Brassica carinata HOM05D002431 ORTHO05D002543 3.4e-06 55.8 76 51.3
C05p29220 Brassica napus HOM05D002431 ORTHO05D002543 3.4e-06 55.8 76 51.3
CANSAT35G0357 Cannabis sativa HOM05D002431 ORTHO05D002543 3.4e-06 55.8 70 51.4
HanXRQChr04g0116471 Helianthus annuus HOM05D002431 ORTHO05D002543 3.4e-06 55.8 65 55.4
arahy.Tifrunner.gnm1.ann1.X1RNA0 Arachis hypogaea HOM05D002431 ORTHO05D002543 4.5e-06 55.5 84 40.5
BraA09t39141Z Brassica rapa HOM05D002431 ORTHO05D002543 4.5e-06 55.5 72 54.2
Thhalv10007414m.g Eutrema salsugineum HOM05D002431 ORTHO05D002543 4.5e-06 55.5 75 49.3
Prupe.4G085800 Prunus persica HOM05D002431 ORTHO05D002543 4.5e-06 55.5 61 57.4
Sed0014194 Sechium edule HOM05D002431 ORTHO05D002543 4.5e-06 55.5 70 51.4
VMungo0251G2807 Vigna mungo HOM05D002431 ORTHO05D002543 4.5e-06 55.5 66 56.1
Gorai.009G152800 Gossypium raimondii HOM05D002431 ORTHO05D002543 5.9e-06 55.1 70 48.6
PSO675G2568 Papaver somniferum HOM05D002431 ORTHO05D002543 5.9e-06 55.1 78 48.7
arahy.Tifrunner.gnm1.ann1.XA2RWL Arachis hypogaea HOM05D002431 ORTHO05D002543 7.7e-06 54.7 69 46.4
FAN16G3322 Fragaria x ananassa HOM05D002431 ORTHO05D002543 7.7e-06 54.7 61 57.4
Gohir.A10G044000 Gossypium hirsutum HOM05D002431 ORTHO05D002543 7.7e-06 54.7 70 47.1
Lj2A322T64 Lonicera japonica HOM05D002431 ORTHO05D002543 7.7e-06 54.7 59 57.6
MD10G1258000 Malus domestica HOM05D002431 ORTHO05D002543 7.7e-06 54.7 61 55.7
Hund17751 Selenicereus undatus HOM05D002431 ORTHO05D002543 7.7e-06 54.7 74 47.3
CiPaw.10G088700 Carya illinoinensis HOM05D002431 ORTHO05D002543 1.0e-05 54.3 91 44.0
FvH4_3g05020 Fragaria vesca HOM05D002431 ORTHO05D002543 1.0e-05 54.3 67 53.7
Lj4g0021792 Lotus japonicus HOM05D002431 ORTHO05D002543 1.0e-05 54.3 64 56.2
Nitab4.5_0005655g0020 Nicotiana tabacum HOM05D002431 ORTHO05D002543 1.0e-05 54.3 74 45.9


User provided reference genes

Program Settings