Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015003 Daucus carota HOM05D005451 ORTHO05D006647 1.2e-64 249.6 118 100.0
Hma1.2p1_0828F.1_g225120 Hydrangea macrophylla HOM05D005451 ORTHO05D006647 4.6e-32 141.4 117 63.2
Dinv35793 Davidia involucrata HOM05D005451 ORTHO05D006647 6.6e-31 137.5 115 65.2
CAN.G900.23 Capsicum annuum HOM05D005451 ORTHO05D006647 8.6e-31 137.1 114 59.6
CSS0014192 Camellia sinensis var. sinensis HOM05D005451 ORTHO05D006647 2.5e-30 135.6 115 64.3
CSS0019333 Camellia sinensis var. sinensis HOM05D005451 ORTHO05D006647 2.5e-30 135.6 115 64.3
Cc06_g04340 Coffea canephora HOM05D005451 ORTHO05D006647 5.6e-30 134.4 115 61.7
PGSC0003DMG400003891 Solanum tuberosum HOM05D005451 ORTHO05D006647 5.6e-30 134.4 114 58.8
Nitab4.5_0008624g0010 Nicotiana tabacum HOM05D005451 ORTHO05D006647 7.3e-30 134.0 116 59.5
Actinidia28910 Actinidia chinensis HOM05D005451 ORTHO05D006647 9.6e-30 133.7 115 61.7
Migut.L01710 Erythranthe guttata HOM05D005451 ORTHO05D006647 1.2e-29 133.3 112 60.7
Rhsim03G0090700 Rhododendron simsii HOM05D005451 ORTHO05D006647 1.6e-29 132.9 115 61.7
Peaxi162Scf00722g00002 Petunia axillaris HOM05D005451 ORTHO05D006647 2.8e-29 132.1 114 59.6
Sopen09g003110 Solanum pennellii HOM05D005451 ORTHO05D006647 2.8e-29 132.1 112 60.7
THA.LOC104805223 Tarenaya hassleriana HOM05D005451 ORTHO05D006647 4.7e-29 131.3 114 58.8
Actinidia26660 Actinidia chinensis HOM05D005451 ORTHO05D006647 8.1e-29 130.6 116 62.9
Eucgr.A01667 Eucalyptus grandis HOM05D005451 ORTHO05D006647 8.1e-29 130.6 114 61.4
Gohir.A04G071800 Gossypium hirsutum HOM05D005451 ORTHO05D006647 8.1e-29 130.6 115 59.1
Gohir.D04G110300 Gossypium hirsutum HOM05D005451 ORTHO05D006647 8.1e-29 130.6 115 59.1
Gorai.009G414400 Gossypium raimondii HOM05D005451 ORTHO05D006647 8.1e-29 130.6 115 59.1
Lsat_1_v5_gn_1_51620 Lactuca sativa HOM05D005451 ORTHO05D006647 8.1e-29 130.6 115 60.9
unitig_899.g15217 Utricularia gibba HOM05D000548 ORTHO05D000987 8.1e-29 130.6 118 55.1
Hund19112 Selenicereus undatus HOM05D005451 ORTHO05D006647 1.1e-28 130.2 114 57.9
MSTRG.26689 Avicennia marina HOM05D005451 ORTHO05D006647 1.4e-28 129.8 114 59.6
Lsat_1_v5_gn_2_107281 Lactuca sativa HOM05D005451 ORTHO05D006647 1.4e-28 129.8 114 60.5
Nn6g35270 Nelumbo nucifera HOM05D005451 ORTHO05D006647 1.4e-28 129.8 113 58.4
HanXRQChr11g0350471 Helianthus annuus HOM05D005451 ORTHO05D006647 2.4e-28 129.0 116 60.3
Solyc09g008290.4 Solanum lycopersicum HOM05D005451 ORTHO05D006647 3.1e-28 128.6 112 58.9
FAN02G0799 Fragaria x ananassa HOM05D005451 ORTHO05D006647 4.0e-28 128.3 114 57.9
CANSAT80G0106 Cannabis sativa HOM05D005451 ORTHO05D006647 5.2e-28 127.9 116 59.5
Cfa017630 Carpinus fangiana HOM05D005451 ORTHO05D006647 5.2e-28 127.9 113 58.4
Haze_20523 Corylus avellana HOM05D005451 ORTHO05D006647 5.2e-28 127.9 113 58.4
Manes.08G011600 Manihot esculenta HOM05D005451 ORTHO05D006647 5.2e-28 127.9 113 58.4
SGA_v2.0_scaffold84G26539 Striga asiatica HOM05D005451 ORTHO05D006647 5.2e-28 127.9 116 57.8
FvH4_6g16520 Fragaria vesca HOM05D005451 ORTHO05D006647 6.9e-28 127.5 114 57.9
TAR369G0910 Trochodendron aralioides HOM05D005451 ORTHO05D006647 6.9e-28 127.5 116 57.8
ECA248G2056 Erigeron canadensis HOM05D005451 ORTHO05D006647 8.9e-28 127.1 114 58.8
Potri.006G123100 Populus trichocarpa HOM05D005451 ORTHO05D006647 8.9e-28 127.1 116 58.6
RcHm_v2.0_Chr3g0470431 Rosa chinensis HOM05D005451 ORTHO05D006647 8.9e-28 127.1 115 57.4
SalBow6G0361 Salvia bowleyana HOM05D005451 ORTHO05D006647 8.9e-28 127.1 111 57.7
FAN05G1419 Fragaria x ananassa HOM05D005451 ORTHO05D006647 1.2e-27 126.7 115 57.4
FAN14G0704 Fragaria x ananassa HOM05D005451 ORTHO05D006647 1.2e-27 126.7 115 57.4
EL10Ac3g07190 Beta vulgaris HOM05D005451 ORTHO05D006647 1.5e-27 126.3 119 56.3
Aa31LG10G8270 Aethionema arabicum HOM05D005451 ORTHO05D006647 2.0e-27 125.9 119 55.5
PGR004G0040 Punica granatum HOM05D005451 ORTHO05D006647 2.0e-27 125.9 115 60.0
QL07p043063 Quercus lobata HOM05D005451 ORTHO05D006647 2.0e-27 125.9 115 56.5
GSVIVG01033652001 Vitis vinifera HOM05D005451 ORTHO05D006647 2.0e-27 125.9 115 55.7
Zm00001eb074150 Zea mays HOM05D005451 ORTHO05D006647 2.0e-27 125.9 114 57.9
Dinv37322 Davidia involucrata HOM05D005451 ORTHO05D006647 2.6e-27 125.6 112 59.8
Thhalv10010819m.g Eutrema salsugineum HOM05D005451 ORTHO05D006647 2.6e-27 125.6 113 54.9
Gohir.A09G145800 Gossypium hirsutum HOM05D005451 ORTHO05D006647 2.6e-27 125.6 109 59.6
Atru.chr8.1787 Acer truncatum HOM05D005451 ORTHO05D006647 3.4e-27 125.2 116 56.9
Ciclev10017163m.g Citrus clementina HOM05D005451 ORTHO05D006647 4.4e-27 124.8 115 57.4
Duzib128G0902 Durio zibethinus HOM05D005451 ORTHO05D006647 4.4e-27 124.8 115 59.1
MD12G1109800 Malus domestica HOM05D005451 ORTHO05D006647 4.4e-27 124.8 114 57.9
Nitab4.5_0000578g0070 Nicotiana tabacum HOM05D005451 ORTHO05D006647 4.4e-27 124.8 124 54.0
TAR623G1526 Trochodendron aralioides HOM05D005451 ORTHO05D006647 4.4e-27 124.8 113 56.6
PSO063G2125 Papaver somniferum HOM05D005451 ORTHO05D006647 5.8e-27 124.4 116 56.9
Os04g0560200 Oryza sativa ssp. japonica HOM05D005451 ORTHO05D006647 7.6e-27 124.0 115 54.8
PSO339G4566 Papaver somniferum HOM05D005451 ORTHO05D006647 7.6e-27 124.0 116 56.9
MELO3C024468.2 Cucumis melo HOM05D005451 ORTHO05D006647 9.9e-27 123.6 116 56.9
FAN09G1715 Fragaria x ananassa HOM05D005451 ORTHO05D006647 9.9e-27 123.6 115 55.7
SGA_v2.0_scaffold90G27758 Striga asiatica HOM05D005451 ORTHO05D006647 9.9e-27 123.6 116 56.0
TWI53G1613 Tripterygium wilfordii HOM05D005451 ORTHO05D006647 9.9e-27 123.6 115 54.8
Prupe.7G128400 Prunus persica HOM05D005451 ORTHO05D006647 1.3e-26 123.2 114 57.0
Thhalv10017445m.g Eutrema salsugineum HOM05D005451 ORTHO05D006647 1.7e-26 122.9 113 53.1
FAN15G0973 Fragaria x ananassa HOM05D005451 ORTHO05D006647 1.7e-26 122.9 115 56.5
HPP92_021403 Vanilla planifolia HOM05D005451 ORTHO05D006647 1.7e-26 122.9 111 55.0
HPP92_027104 Vanilla planifolia HOM05D005451 ORTHO05D006647 1.7e-26 122.9 111 55.0
COL.COLO4_26945 Corchorus olitorius HOM05D005451 ORTHO05D006647 2.2e-26 122.5 115 56.5
CARHR163080 Cardamine hirsuta HOM05D005451 ORTHO05D006647 4.9e-26 121.3 115 53.9
Sabra06G0097400 Salix brachista HOM05D005451 ORTHO05D006647 4.9e-26 121.3 120 55.8
Hund24635 Selenicereus undatus HOM05D005451 ORTHO05D006647 4.9e-26 121.3 114 56.1
ClCG04G009330 Citrullus lanatus HOM05D005451 ORTHO05D006647 6.4e-26 120.9 116 56.9
CsaV3_6G039920 Cucumis sativus L. HOM05D005451 ORTHO05D006647 6.4e-26 120.9 116 56.0
Aa31LG10G8380 Aethionema arabicum HOM05D005451 ORTHO05D006647 8.4e-26 120.6 117 56.4
AT3G53220 Arabidopsis thaliana HOM05D005451 ORTHO05D006647 8.4e-26 120.6 114 52.6
Psat3g042120 Pisum sativum HOM05D005451 ORTHO05D006647 1.1e-25 120.2 111 55.9
AL5G34100 Arabidopsis lyrata HOM05D005451 ORTHO05D006647 1.4e-25 119.8 115 53.9
Ca_08909_v3 Cicer arietinum L. HOM05D005451 ORTHO05D006647 1.9e-25 119.4 111 56.8
Carub.0005s1975 Capsella rubella HOM05D005451 ORTHO05D006647 2.4e-25 119.0 115 53.0
CiPaw.09G171400 Carya illinoinensis HOM05D005451 ORTHO05D006647 2.4e-25 119.0 110 57.3
Lalb_Chr20g0112581 Lupinus albus HOM05D005451 ORTHO05D006647 2.4e-25 119.0 108 54.6
Sed0015565 Sechium edule HOM05D005451 ORTHO05D006647 3.2e-25 118.6 111 55.9
TPR.G32842 Trifolium pratense HOM05D005451 ORTHO05D006647 4.2e-25 118.2 111 55.9
AUR62030367 Chenopodium quinoa HOM05D005451 ORTHO05D006647 5.4e-25 117.9 116 54.3
AUR62040850 Chenopodium quinoa HOM05D005451 ORTHO05D006647 5.4e-25 117.9 116 54.3
BcaB02g07801 Brassica carinata HOM05D005451 ORTHO05D006647 7.1e-25 117.5 108 54.6
A07p21440 Brassica napus HOM05D005451 ORTHO05D006647 9.3e-25 117.1 108 53.7
BraA07t29831Z Brassica rapa HOM05D005451 ORTHO05D006647 9.3e-25 117.1 108 53.7
Duzib106G1340 Durio zibethinus HOM05D005451 ORTHO05D006647 9.3e-25 117.1 115 54.8
Medtr7g102130 Medicago truncatula HOM05D005451 ORTHO05D006647 9.3e-25 117.1 111 55.0
Sp5g09120 Schrenkiella parvula HOM05D005451 ORTHO05D006647 9.3e-25 117.1 110 55.5
MD04G1091800 Malus domestica HOM05D005451 ORTHO05D006647 1.2e-24 116.7 110 56.4
Phvul.001G179600 Phaseolus vulgaris HOM05D005451 ORTHO05D006647 1.2e-24 116.7 113 51.3
Sc02g0001580 Simmondsia chinensis HOM05D005451 ORTHO05D006647 1.2e-24 116.7 114 56.1
Thecc.05G068800 Theobroma cacao HOM05D005451 ORTHO05D006647 1.6e-24 116.3 115 54.8
C06p21050 Brassica napus HOM05D005451 ORTHO05D006647 3.5e-24 115.2 108 52.8
BolC6t37290H Brassica oleracea HOM05D005451 ORTHO05D006647 3.5e-24 115.2 108 52.8
Lj1g0026290 Lotus japonicus HOM05D005451 ORTHO05D006647 4.6e-24 114.8 108 52.8
VMungo1383G1956 Vigna mungo HOM05D005451 ORTHO05D006647 6.0e-24 114.4 112 54.5
BcaC02g09178 Brassica carinata HOM05D005451 ORTHO05D006647 5.1e-23 111.3 108 53.7
BcaC02g09179 Brassica carinata HOM05D005451 ORTHO05D006647 5.1e-23 111.3 108 53.7
BolC4t25546H Brassica oleracea HOM05D005451 ORTHO05D006647 5.1e-23 111.3 108 53.7
arahy.Tifrunner.gnm1.ann1.N3Z787 Arachis hypogaea HOM05D005451 ORTHO05D006647 8.7e-23 110.5 108 51.9
arahy.Tifrunner.gnm1.ann1.WMHD1H Arachis hypogaea HOM05D005451 ORTHO05D006647 8.7e-23 110.5 108 51.9
arahy.Tifrunner.gnm1.ann1.XN7WR1 Arachis hypogaea HOM05D005451 ORTHO05D006647 8.7e-23 110.5 108 51.9
CDE09G0643 Ceratophyllum demersum HOM05D005451 ORTHO05D006647 1.1e-22 110.2 114 48.2
arahy.Tifrunner.gnm1.ann1.4RQ7RI Arachis hypogaea HOM05D005451 ORTHO05D006647 1.5e-22 109.8 104 52.9
arahy.Tifrunner.gnm1.ann1.EAT06N Arachis hypogaea HOM05D005451 ORTHO05D006647 1.5e-22 109.8 108 51.9
BcaB02g08532 Brassica carinata HOM05D005451 ORTHO05D006647 1.9e-22 109.4 110 53.6
BraA04t16327Z Brassica rapa HOM05D005451 ORTHO05D006647 4.3e-22 108.2 108 52.8
FAN05G2954 Fragaria x ananassa HOM05D005451 ORTHO05D006647 2.8e-21 105.5 46 100.0
ATR0776G022 Amborella trichopoda HOM05D005451 ORTHO05D006647 4.8e-21 104.8 110 48.2
C04p39740 Brassica napus HOM05D005451 ORTHO05D006647 2.0e-19 99.4 108 48.1
Gorai.006G162600 Gossypium raimondii HOM05D005451 ORTHO05D006647 3.4e-19 98.6 46 93.5
Pp3c9_9220 Physcomitrium patens HOM05D005451 ORTHO05D006647 1.7e-18 96.3 112 42.0
Aqoxy1G01137 Aquilegia oxysepala HOM05D005451 ORTHO05D006647 2.2e-18 95.9 46 89.1
AagrBONN_evm.TU.Sc2ySwM_368.2032 Anthoceros agrestis HOM05D005451 ORTHO05D006647 3.8e-18 95.1 113 42.5
A04p06230 Brassica napus HOM05D005451 ORTHO05D006647 6.4e-18 94.4 110 48.2
arahy.Tifrunner.gnm1.ann1.D9EGN0 Arachis hypogaea HOM05D032153 ORTHO05D006647 1.1e-17 93.6 46 87.0
Glyma.19G184600 Glycine max HOM05D005451 ORTHO05D006647 1.1e-17 93.6 47 89.4
Mapoly0103s0022 Marchantia polymorpha HOM05D005451 ORTHO05D006647 2.4e-17 92.4 113 40.7
TPR.G10764 Trifolium pratense HOM05D005451 ORTHO05D006647 5.4e-17 91.3 46 84.8
Glyma.03G184100 Glycine max HOM05D005451 ORTHO05D006647 1.6e-16 89.7 47 87.2
SMO203G0200 Selaginella moellendorffii HOM05D005451 ORTHO05D006647 2.3e-15 85.9 113 36.3
CBR_g19638 Chara braunii HOM05D005451 ORTHO05D006647 4.8e-13 78.2 113 35.4
PRCOL_00001867 Prasinoderma coloniale HOM05D005451 ORTHO05D006647 3.4e-11 72.0 109 33.0
arahy.Tifrunner.gnm1.ann1.W9B6QC Arachis hypogaea HOM05D005451 ORTHO05D006647 3.0e-07 58.9 79 41.8
MCO09G819 Micromonas commoda HOM05D005451 ORTHO05D006647 5.6e-06 54.7 48 43.8


User provided reference genes

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