Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 3.8e-66 254.6 121 100.0
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 8.0e-56 220.3 120 85.8
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.0e-55 218.4 121 86.0
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 6.7e-55 217.2 120 85.8
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 8.8e-55 216.9 121 85.1
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 8.8e-55 216.9 120 85.8
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 8.8e-55 216.9 120 85.8
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 2.0e-54 215.7 120 85.0
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 4.4e-54 214.5 121 83.5
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 5.7e-54 214.2 120 85.0
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 7.5e-54 213.8 120 84.2
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 9.7e-54 213.4 121 84.3
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.3e-53 213.0 121 85.1
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.7e-53 212.6 120 83.3
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.7e-53 212.6 121 83.5
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 2.2e-53 212.2 121 84.3
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 8.2e-53 210.3 121 81.8
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 8.2e-53 210.3 121 81.8
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 8.2e-53 210.3 121 82.6
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.1e-52 209.9 121 82.6
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 1.1e-52 209.9 121 83.5
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.4e-52 209.5 121 81.8
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 1.4e-52 209.5 121 81.8
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 2.4e-52 208.8 119 82.4
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 3.1e-52 208.4 121 81.8
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 3.1e-52 208.4 121 82.6
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 5.3e-52 207.6 121 83.5
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 9.1e-52 206.8 121 81.0
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 81.8
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 81.8
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 2.0e-51 205.7 121 80.2
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.7e-51 205.3 121 82.6
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 4.5e-51 204.5 122 81.1
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.0e-50 203.4 121 79.3
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 1.3e-50 203.0 121 81.0
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 1.7e-50 202.6 122 80.3
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.9e-50 201.8 121 81.0
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.1e-49 199.9 121 79.3
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.9e-49 199.1 128 77.3
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.2e-49 198.4 123 79.7
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 3.2e-49 198.4 123 79.7
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 79.5
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 79.5
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 79.5
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 4.2e-49 198.0 121 76.9
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 5.5e-49 197.6 121 79.3
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 7.2e-49 197.2 122 79.5
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 9.4e-49 196.8 121 78.5
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 1.2e-48 196.4 121 80.2
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.6e-48 196.1 121 78.5
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.1e-48 195.7 122 78.7
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.1e-48 195.7 119 79.0
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.7e-48 195.3 119 79.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 8.0e-48 193.7 117 76.1
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.4e-47 193.0 117 76.9
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.8e-47 192.6 116 77.6
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 2.3e-47 192.2 119 75.6
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.3e-47 192.2 121 75.2
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 3.0e-47 191.8 119 77.3
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 4.0e-47 191.4 120 78.3
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 5.2e-47 191.0 117 76.1
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 5.2e-47 191.0 117 76.1
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 5.2e-47 191.0 117 76.1
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 5.2e-47 191.0 117 76.1
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 8.8e-47 190.3 121 76.0
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-46 189.9 117 75.2
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-46 189.9 117 75.2
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.5e-46 189.5 121 74.4
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 2.0e-46 189.1 117 75.2
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 2.0e-46 189.1 117 75.2
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 2.0e-46 189.1 117 75.2
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 2.6e-46 188.7 117 75.2
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 2.6e-46 188.7 117 75.2
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.4e-46 188.3 134 71.6
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 4.4e-46 188.0 117 74.4
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 4.4e-46 188.0 117 75.2
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.3e-45 186.4 117 75.2
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 1.3e-45 186.4 117 75.2
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 1.3e-45 186.4 121 75.2
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 1.3e-45 186.4 125 72.8
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 2.2e-45 185.7 126 72.2
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 3.7e-45 184.9 120 76.7
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.9e-41 172.6 92 87.0
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.6e-40 169.5 101 79.2
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 8.0e-40 167.2 89 86.5
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 8.0e-40 167.2 101 79.2
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.8e-39 166.0 92 83.7
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 2.3e-39 165.6 120 69.2
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 8.8e-39 163.7 119 67.2
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 8.8e-39 163.7 92 82.6
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.2e-38 163.3 89 83.1
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 3.4e-38 161.8 116 65.5
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 5.7e-38 161.0 131 66.4
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 9.8e-38 160.2 116 63.8
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.2e-37 159.1 88 81.8
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 8.3e-37 157.1 90 81.1
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.1e-36 156.8 87 83.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 2.4e-36 155.6 89 80.9
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 9.2e-36 153.7 87 83.9
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 5.9e-35 151.0 74 89.2
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 7.8e-35 150.6 89 78.7
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 2.9e-34 148.7 92 75.0
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 2.9e-34 148.7 92 75.0
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 6.6e-34 147.5 117 65.8
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 6.6e-34 147.5 117 65.8
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 4.3e-33 144.8 74 89.2
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 7.3e-33 144.1 89 71.9
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.2e-32 143.3 90 72.2
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.6e-32 142.9 85 80.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.6e-32 142.9 99 72.7
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.8e-31 139.4 102 69.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 3.0e-31 138.7 87 73.6
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 5.7e-30 134.4 101 68.3
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 3.5e-27 125.2 98 65.3
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.7e-26 122.9 88 61.4
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.1e-20 103.6 66 72.7
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 1.7e-18 96.3 98 51.0
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.1e-17 93.6 121 47.9
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.2e-16 90.1 109 43.1
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 2.0e-14 82.8 128 35.9
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 1.3e-13 80.1 116 38.8
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.4e-12 76.6 150 34.0
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 2.5e-09 65.9 33 90.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 5.6e-09 64.7 30 86.7
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.6e-08 63.2 31 90.3
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 8.9e-07 57.4 25 100.0


User provided reference genes

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