Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 1.4e-142 509.6 263 100.0
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 1.0e-60 237.7 296 53.0
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 2.3e-55 219.9 301 48.2
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 7.3e-54 214.9 299 50.2
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 1.6e-53 213.8 310 47.4
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 1.6e-53 213.8 300 48.0
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 2.8e-53 213.0 297 47.1
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 2.3e-52 209.9 306 47.1
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 8.9e-52 208.0 293 46.8
CANSAT80G2505 Cannabis sativa HOM05D004499 ORTHO05D004928 9.8e-51 204.5 331 42.9
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 1.3e-50 204.1 298 47.7
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 2.9e-50 203.0 313 46.0
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 3.7e-50 202.6 305 46.2
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 1.1e-49 201.1 319 45.5
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 1.9e-49 200.3 287 47.7
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 2.4e-49 199.9 284 47.2
Prupe.6G240400 Prunus persica HOM05D004499 ORTHO05D004928 1.6e-48 197.2 308 44.5
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 2.7e-48 196.4 318 41.2
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 1.0e-47 194.5 301 45.5
Gohir.A09G151400 Gossypium hirsutum HOM05D004499 ORTHO05D004928 1.3e-47 194.1 283 45.6
Gorai.006G168200 Gossypium raimondii HOM05D004499 ORTHO05D004928 1.7e-47 193.7 283 45.6
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 3.9e-47 192.6 300 46.7
Gohir.D09G147000 Gossypium hirsutum HOM05D004499 ORTHO05D004928 8.6e-47 191.4 283 45.2
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 9.5e-46 188.0 310 44.2
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 1.6e-45 187.2 303 42.9
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 2.8e-45 186.4 314 43.3
Cpa.g.sc174.12 Carica papaya HOM05D004499 ORTHO05D004928 4.7e-45 185.7 275 46.2
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 4.7e-45 185.7 304 41.4
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 8.1e-45 184.9 300 45.7
Thecc.05G055800 Theobroma cacao HOM05D004499 ORTHO05D004928 1.4e-44 184.1 312 42.9
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 1.8e-44 183.7 289 46.4
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 2.3e-44 183.3 302 46.0
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 2.3e-44 183.3 289 45.3
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 3.1e-44 183.0 331 42.0
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 6.8e-44 181.8 318 42.8
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 6.8e-44 181.8 311 41.8
Rhsim04G0149000 Rhododendron simsii HOM05D004499 ORTHO05D004928 3.4e-43 179.5 329 40.4
RcHm_v2.0_Chr3g0469011 Rosa chinensis HOM05D004499 ORTHO05D004928 7.5e-43 178.3 319 40.8
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 1.3e-42 177.6 306 44.8
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 2.2e-42 176.8 211 51.2
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 2.2e-42 176.8 211 51.2
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 3.7e-42 176.0 318 41.5
PGSC0003DMG400001742 Solanum tuberosum HOM05D004499 ORTHO05D004928 3.7e-42 176.0 291 43.3
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 4.9e-42 175.6 221 49.8
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 4.9e-42 175.6 284 43.7
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 1.4e-41 174.1 261 43.7
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 1.4e-41 174.1 211 51.2
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 1.4e-41 174.1 211 51.2
Manes.08G004109 Manihot esculenta HOM05D004499 ORTHO05D004928 1.9e-41 173.7 211 50.2
Manes.08G004117 Manihot esculenta HOM05D004499 ORTHO05D004928 1.9e-41 173.7 211 50.2
THA.LOC104806496 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 2.4e-41 173.3 308 40.6
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 3.2e-41 172.9 211 50.2
VMungo1383G2757 Vigna mungo HOM05D004499 ORTHO05D004928 4.1e-41 172.6 283 44.2
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 5.4e-41 172.2 190 55.8
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 1.2e-40 171.0 312 42.9
Sopen00g013370 Solanum pennellii HOM05D004499 ORTHO05D004928 1.2e-40 171.0 275 43.3
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 1.2e-40 171.0 324 39.5
Glyma.03G178700 Glycine max HOM05D004499 ORTHO05D004928 2.1e-40 170.2 274 41.6
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 3.5e-40 169.5 301 44.2
unitig_26.g9218 Utricularia gibba HOM05D004499 ORTHO05D004928 3.5e-40 169.5 268 45.9
FAN14G2800 Fragaria x ananassa HOM05D004499 ORTHO05D004928 7.8e-40 168.3 334 40.4
Solyc09g007470.2 Solanum lycopersicum HOM05D004499 ORTHO05D004928 7.8e-40 168.3 283 43.5
FvH4_6g15510 Fragaria vesca HOM05D004499 ORTHO05D004928 1.7e-39 167.2 334 40.4
FAN02G0924 Fragaria x ananassa HOM05D004499 ORTHO05D004928 2.3e-39 166.8 316 38.9
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 3.0e-39 166.4 323 38.7
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 3.0e-39 166.4 325 37.2
FAN09G3365 Fragaria x ananassa HOM05D004499 ORTHO05D004928 6.6e-39 165.2 324 39.8
MSTRG.26719 Avicennia marina HOM05D004499 ORTHO05D004928 2.5e-38 163.3 281 45.6
Phvul.001G175400 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 5.6e-38 162.2 286 42.3
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 2.8e-37 159.8 321 38.9
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 3.6e-37 159.5 287 43.2
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 8.1e-37 158.3 306 41.5
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 5.2e-36 155.6 294 42.5
Lalb_Chr01g0018981 Lupinus albus HOM05D004499 ORTHO05D004928 6.8e-36 155.2 322 39.4
Oeu038974.1 Olea europaea HOM05D004499 ORTHO05D004928 6.8e-36 155.2 346 38.2
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 2.6e-35 153.3 275 39.6
Ca_08832_v3 Cicer arietinum L. HOM05D004499 ORTHO05D004928 3.4e-35 152.9 286 41.6
Medtr1g066750 Medicago truncatula HOM05D004499 ORTHO05D004928 3.4e-35 152.9 297 39.4
MSTRG.10304 Avicennia marina HOM05D004499 ORTHO05D004928 4.4e-35 152.5 288 40.3
Medtr7g100830 Medicago truncatula HOM05D004499 ORTHO05D004928 7.6e-35 151.8 284 41.9
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 2.9e-34 149.8 293 39.6
ECA233G0353 Erigeron canadensis HOM05D004499 ORTHO05D004928 6.4e-34 148.7 263 41.8
Lj5g0026303 Lotus japonicus HOM05D004499 ORTHO05D004928 1.9e-33 147.1 313 39.3
Sp4g19420 Schrenkiella parvula HOM05D004499 ORTHO05D004928 3.2e-33 146.4 309 37.5
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 4.1e-33 146.0 294 40.5
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 1.2e-32 144.4 287 40.8
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 2.1e-32 143.7 322 36.3
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 4.6e-32 142.5 292 39.4
Manes.08G004906 Manihot esculenta HOM05D004499 ORTHO05D004928 6.0e-32 142.1 187 48.1
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 6.0e-32 142.1 275 40.4
Oeu060092.2 Olea europaea HOM05D000784 ORTHO05D004928 7.8e-32 141.7 269 39.4
Thhalv10016942m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 1.3e-31 141.0 323 36.8
AL4G33450 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 3.9e-31 139.4 299 38.1
ClCG04G008860 Citrullus lanatus HOM05D004499 ORTHO05D004928 5.1e-31 139.0 273 40.3
MD12G1122400 Malus domestica HOM05D004499 ORTHO05D004928 6.6e-31 138.7 296 36.8
Aa31LG5G22320 Aethionema arabicum HOM05D004499 ORTHO05D004928 8.7e-31 138.3 281 39.5
CARHR210240 Cardamine hirsuta HOM05D004499 ORTHO05D004928 8.7e-31 138.3 286 41.3
Manes.12G048251 Manihot esculenta HOM05D004499 ORTHO05D004928 8.7e-31 138.3 187 47.6
Psat3g044200 Pisum sativum HOM05D004499 ORTHO05D004928 1.1e-30 137.9 293 36.2
Manes.05G197001 Manihot esculenta HOM05D004499 ORTHO05D004928 3.3e-30 136.3 187 47.1
SGA_v2.0_scaffold126G33909 Striga asiatica HOM05D004499 ORTHO05D004928 4.3e-30 136.0 264 40.9
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 1.2e-29 134.4 287 39.0
MELO3C014257.2 Cucumis melo HOM05D004499 ORTHO05D004928 3.6e-29 132.9 277 39.0
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 4.7e-29 132.5 287 38.3
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 4.7e-29 132.5 287 38.3
Psat6g070200 Pisum sativum HOM05D004499 ORTHO05D004928 6.2e-29 132.1 265 39.2
Oeu059988.1 Olea europaea HOM05D004499 ORTHO05D004928 8.1e-29 131.7 391 33.2
BcaB02g09303 Brassica carinata HOM05D004499 ORTHO05D004928 1.8e-28 130.6 318 34.9
Lalb_Chr20g0112851 Lupinus albus HOM05D004499 ORTHO05D004928 1.8e-28 130.6 233 40.3
A05p08740 Brassica napus HOM05D004499 ORTHO05D004928 2.4e-28 130.2 303 37.0
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 3.1e-28 129.8 287 38.0
BcaC02g11837 Brassica carinata HOM05D004499 ORTHO05D004928 4.0e-28 129.4 300 36.3
C04p10830 Brassica napus HOM05D004499 ORTHO05D004928 4.0e-28 129.4 300 36.3
Manes.05G197300 Manihot esculenta HOM05D004499 ORTHO05D004928 5.2e-28 129.0 226 41.6
BolC4t22678H Brassica oleracea HOM05D004499 ORTHO05D004928 1.2e-27 127.9 300 36.3
Lsat_1_v5_gn_1_54160 Lactuca sativa HOM05D004499 ORTHO05D004928 2.6e-27 126.7 260 40.0
BraA05t19842Z Brassica rapa HOM05D004499 ORTHO05D004928 3.4e-27 126.3 303 36.6
CsaV3_6G039360 Cucumis sativus L. HOM05D004499 ORTHO05D004928 4.4e-27 125.9 286 37.1
Gohir.D04G114901 Gossypium hirsutum HOM05D004499 ORTHO05D004928 9.9e-27 124.8 165 46.1
THA.LOC104826978 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 2.9e-26 123.2 306 35.9
AL6G12390 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 3.8e-26 122.9 286 39.2
AT2G37100 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 3.8e-26 122.9 294 37.8
AUR62042302 Chenopodium quinoa HOM05D004499 ORTHO05D004928 3.8e-26 122.9 299 36.1
Carub.0004s1899 Capsella rubella HOM05D004499 ORTHO05D004928 4.9e-26 122.5 292 36.6
Duzib106G0876 Durio zibethinus HOM05D004499 ORTHO05D004928 6.4e-26 122.1 267 37.1
Carub.0006s0191 Capsella rubella HOM05D004499 ORTHO05D004928 1.1e-25 121.3 279 39.8
SHI12538 Sapria himalayana HOM05D004499 ORTHO05D004928 1.9e-25 120.6 260 36.9
AT5G03110 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 3.2e-25 119.8 282 38.3
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 5.4e-25 119.0 288 39.9
Ah.15g092180 Amaranthus hybridus HOM05D004499 ORTHO05D004928 7.1e-25 118.6 177 45.8
Thhalv10014228m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 2.1e-24 117.1 293 38.6
BcaB05g21851 Brassica carinata HOM05D004499 ORTHO05D004928 2.7e-24 116.7 304 36.5
Sed0011318 Sechium edule HOM05D004499 ORTHO05D004928 7.8e-24 115.2 190 42.6
BraA02t04744Z Brassica rapa HOM05D004499 ORTHO05D004928 8.7e-23 111.7 287 35.2
Actinidia40043 Actinidia chinensis HOM05D004499 ORTHO05D004928 2.5e-22 110.2 268 34.7
PSO339G1230 Papaver somniferum HOM05D004499 ORTHO05D004928 2.5e-22 110.2 302 36.8
Sc02g0001920 Simmondsia chinensis HOM05D004499 ORTHO05D004928 2.5e-22 110.2 271 36.9
COL.COLO4_27061 Corchorus olitorius HOM05D004499 ORTHO05D004928 7.3e-22 108.6 84 66.7
PSO384G2831 Papaver somniferum HOM05D004499 ORTHO05D004928 1.3e-21 107.8 301 37.2
PSO063G6372 Papaver somniferum HOM05D004499 ORTHO05D004928 6.2e-21 105.5 292 36.3
THA.LOC104816329 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 2.4e-20 103.6 316 35.1
SGA_v2.0_scaffold94G28675 Striga asiatica HOM05D004499 ORTHO05D004928 9.0e-20 101.7 269 34.6
HanXRQChr02g0051991 Helianthus annuus HOM05D004499 ORTHO05D004928 9.9e-19 98.2 397 29.2
TPR.G36959 Trifolium pratense HOM05D004499 ORTHO05D004928 2.9e-18 96.7 199 37.2
RhsimUnG0115800 Rhododendron simsii HOM05D004499 ORTHO05D004928 4.9e-18 95.9 263 35.7
Peaxi162Scf00005g04016 Petunia axillaris HOM05D004499 ORTHO05D004928 8.4e-18 95.1 163 42.3
PSO339G0805 Papaver somniferum HOM05D004499 ORTHO05D004928 3.2e-17 93.2 304 35.9
HPP92_001043 Vanilla planifolia HOM05D004499 ORTHO05D004928 9.6e-14 81.6 299 33.1
AUR62040029 Chenopodium quinoa HOM05D004499 ORTHO05D004928 8.1e-13 78.6 275 32.4
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 1.8e-12 77.4 94 47.9
AUR62044753 Chenopodium quinoa HOM05D004499 ORTHO05D004928 6.9e-12 75.5 255 31.8
Nn4g25115 Nelumbo nucifera HOM05D004499 ORTHO05D004928 1.2e-11 74.7 126 38.1
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 1.7e-10 70.9 277 28.5
CDE10G0599 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 4.2e-09 66.2 170 32.9
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 4.2e-09 66.2 287 27.9
HPP92_025086 Vanilla planifolia HOM05D004499 ORTHO05D004928 1.6e-08 64.3 323 27.2
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 3.5e-08 63.2 277 31.4
DCAR_009279 Daucus carota HOM05D004499 ORTHO05D004928 7.9e-08 62.0 166 33.7
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 7.9e-08 62.0 351 28.2
MBI05_g41566_MAGBIO Magnolia biondii HOM05D060308 ORTHO05D004928 1.0e-07 61.6 99 44.4
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 5.1e-07 59.3 260 30.0
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 2.5e-06 57.0 294 26.2
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 3.3e-06 56.6 328 26.8
Gohir.A08G021600 Gossypium hirsutum HOM05D004118 ORTHO05D004686 4.3e-06 56.2 269 27.5
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 4.3e-06 56.2 312 26.3
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 4.3e-06 56.2 188 34.0
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 7.4e-06 55.5 318 25.8
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 7.4e-06 55.5 329 25.8
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 7.4e-06 55.5 320 28.8


User provided reference genes

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