Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014962 Daucus carota HOM05D003265 ORTHO05D003819 0.0e+00 2667.5 1433 100.0
DCAR_017729 Daucus carota HOM05D003265 ORTHO05D003819 2.1e-118 431.8 570 52.6
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.2e-57 229.9 479 39.9
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 7.7e-49 200.7 412 40.5
Migut.L01659 Erythranthe guttata HOM05D003265 ORTHO05D003819 1.6e-46 193.0 534 35.8
Rhsim04G0151400 Rhododendron simsii HOM05D003265 ORTHO05D003819 1.8e-45 189.5 532 35.5
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 3.0e-45 188.7 497 36.0
Oeu026844.1 Olea europaea HOM05D003265 ORTHO05D003819 2.6e-44 185.7 711 31.8
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 4.1e-42 178.3 513 36.3
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 2.7e-41 175.6 562 32.0
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 3.8e-40 171.8 512 35.2
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 5.0e-40 171.4 509 34.0
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 1.9e-39 169.5 576 33.3
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 1.6e-38 166.4 523 35.4
Solyc09g007340.4 Solanum lycopersicum HOM05D000855 ORTHO05D002321 2.8e-38 165.6 562 35.2
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 3.6e-38 165.2 619 32.3
Sopen09g002240 Solanum pennellii HOM05D003265 ORTHO05D003819 1.4e-37 163.3 427 38.6
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 4.0e-37 161.8 499 34.5
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 6.8e-37 161.0 621 30.8
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 1.2e-36 160.2 596 31.7
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 2.6e-36 159.1 529 33.8
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 1.3e-35 156.8 549 33.2
SalBow4G0859 Salvia bowleyana HOM05D003265 ORTHO05D003819 8.3e-35 154.1 528 33.5
PGSC0003DMG400001737 Solanum tuberosum HOM05D003265 ORTHO05D003819 5.4e-34 151.4 604 34.3
Lsat_1_v5_gn_1_53881 Lactuca sativa HOM05D003265 ORTHO05D003819 2.0e-33 149.4 410 36.1
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 2.7e-33 149.1 573 30.9
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 5.9e-33 147.9 511 32.3
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 2.3e-32 146.0 518 33.0
SGA_v2.0_scaffold35G14161 Striga asiatica HOM05D003265 ORTHO05D003819 3.9e-32 145.2 554 31.9
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 3.3e-31 142.1 488 35.5
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 4.3e-31 141.7 547 31.6
FAN05G5023 Fragaria x ananassa HOM05D003265 ORTHO05D003819 9.5e-31 140.6 617 29.3
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.1e-30 139.4 541 33.5
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 2.8e-30 139.0 503 32.8
Hund20166 Selenicereus undatus HOM05D003265 ORTHO05D003819 2.8e-30 139.0 598 30.1
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 6.2e-30 137.9 760 29.2
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 8.0e-30 137.5 536 32.5
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.1e-29 137.1 612 28.9
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.4e-29 136.7 391 34.8
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 1.4e-29 136.7 585 30.6
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 1.8e-29 136.3 582 29.7
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 4.0e-29 135.2 459 30.7
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 5.2e-29 134.8 542 31.7
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 2.0e-28 132.9 503 31.2
Glyma.03G177900 Glycine max HOM05D003265 ORTHO05D003819 2.6e-28 132.5 510 32.4
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 3.4e-28 132.1 572 29.5
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 4.4e-28 131.7 534 30.5
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 7.5e-28 131.0 512 32.6
Actinidia13106 Actinidia chinensis HOM05D003265 ORTHO05D003819 9.8e-28 130.6 216 41.7
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 1.3e-27 130.2 617 28.8
Ciclev10011133m.g Citrus clementina HOM05D003265 ORTHO05D003819 2.2e-27 129.4 508 31.5
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 2.9e-27 129.0 483 32.1
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 2.9e-27 129.0 446 35.0
Ah.15g092100 Amaranthus hybridus HOM05D003265 ORTHO05D003819 6.4e-27 127.9 554 29.8
HanXRQChr11g0350071 Helianthus annuus HOM05D003265 ORTHO05D003819 1.1e-26 127.1 474 32.3
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 1.4e-26 126.7 545 31.7
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.9e-26 126.3 1000 25.6
Psat3g044800 Pisum sativum HOM05D003265 ORTHO05D003819 2.4e-26 125.9 519 31.4
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 7.0e-26 124.4 528 30.9
MSTRG.10296 Avicennia marina HOM05D003265 ORTHO05D003819 1.2e-25 123.6 552 31.5
Medtr7g100700 Medicago truncatula HOM05D003265 ORTHO05D003819 1.2e-25 123.6 523 29.4
VMungo1383G3553 Vigna mungo HOM05D003265 ORTHO05D003819 1.2e-25 123.6 496 31.0
ECA248G3421 Erigeron canadensis HOM05D002706 ORTHO05D003253 2.0e-25 122.9 505 32.9
vmacro20061 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 2.0e-25 122.9 217 40.1
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 3.5e-25 122.1 514 30.5
Oeu026065.2 Olea europaea HOM05D003265 ORTHO05D003819 7.8e-25 120.9 551 32.5
HanXRQChr01g0027471 Helianthus annuus HOM05D003265 ORTHO05D003819 2.3e-24 119.4 558 30.5
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 3.0e-24 119.0 522 29.1
Sc20g0004060 Simmondsia chinensis HOM05D003265 ORTHO05D003819 2.5e-23 115.9 557 28.2
CsaV3_3G035550 Cucumis sativus L. HOM05D003265 ORTHO05D003819 7.3e-23 114.4 513 30.6
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 2.8e-22 112.5 542 28.4
FAN09G0144 Fragaria x ananassa HOM05D003265 ORTHO05D003819 3.6e-22 112.1 548 28.8
MELO3C009314.2 Cucumis melo HOM05D003265 ORTHO05D003819 1.4e-21 110.2 438 31.3
Ca_11451_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 3.1e-21 109.0 523 27.9
Sabra16G0092200 Salix brachista HOM05D003265 ORTHO05D003819 3.1e-21 109.0 623 29.2
Sabra06G0103300 Salix brachista HOM05D003265 ORTHO05D003819 4.0e-21 108.6 901 27.0
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 6.8e-21 107.8 473 28.8
SGA_v2.0_scaffold94G28667 Striga asiatica HOM05D003265 ORTHO05D003819 1.2e-20 107.1 514 30.9
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 2.0e-20 106.3 454 32.8
Lj5g0012648 Lotus japonicus HOM05D003265 ORTHO05D003819 1.3e-19 103.6 516 28.3
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 3.7e-19 102.1 896 27.3
GSVIVG01025625001 Vitis vinifera HOM05D003265 ORTHO05D003819 4.9e-19 101.7 201 38.8
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 1.1e-18 100.5 512 30.3
arahy.Tifrunner.gnm1.ann1.H355B7 Arachis hypogaea HOM05D003265 ORTHO05D003819 3.2e-18 99.0 479 28.2
Sed0003387 Sechium edule HOM05D003265 ORTHO05D003819 9.2e-18 97.4 528 27.8
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 1.2e-17 97.1 539 28.2
AUR62042920 Chenopodium quinoa HOM05D003265 ORTHO05D003819 1.6e-17 96.7 537 29.1
Lalb_Chr01g0019031 Lupinus albus HOM05D003265 ORTHO05D003819 2.1e-17 96.3 516 28.7
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 3.5e-17 95.5 546 28.2
PSO339G3745 Papaver somniferum HOM05D003265 ORTHO05D003819 4.6e-17 95.1 549 27.3
ClCG10G020560 Citrullus lanatus HOM05D003265 ORTHO05D003819 5.1e-16 91.7 424 30.9
Manes.10G042100 Manihot esculenta HOM05D003265 ORTHO05D003819 5.1e-16 91.7 457 27.6
Lj1g0023124 Lotus japonicus HOM05D003265 ORTHO05D003819 1.1e-15 90.5 506 27.3
CAN.G608.11 Capsicum annuum HOM05D003265 ORTHO05D003819 2.5e-15 89.4 346 32.7
Peaxi162Scf00005g04612 Petunia axillaris HOM05D003265 ORTHO05D003819 4.3e-15 88.6 515 31.1
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 1.2e-14 87.0 458 29.9
Glyma.19G178700 Glycine max HOM05D003265 ORTHO05D003819 1.2e-14 87.0 482 27.6
PSO384G1633 Papaver somniferum HOM05D003265 ORTHO05D003819 3.6e-14 85.5 804 26.1
Os05g0121800 Oryza sativa ssp. japonica HOM05D003265 ORTHO05D003819 4.7e-14 85.1 394 27.2
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 4.7e-14 85.1 188 35.6
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 6.2e-14 84.7 442 29.2
AT3G53320 Arabidopsis thaliana HOM05D003265 ORTHO05D003819 1.4e-13 83.6 415 28.0
Thhalv10016413m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 1.4e-13 83.6 504 27.8
TPR.G30247 Trifolium pratense HOM05D003265 ORTHO05D003819 2.4e-13 82.8 486 26.5
Zm00001eb105840 Zea mays HOM05D003265 ORTHO05D003819 3.1e-13 82.4 406 29.3
Thhalv10010259m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 4.0e-13 82.0 402 28.4
Lj2A107T58 Lonicera japonica HOM05D003265 ORTHO05D003819 8.9e-13 80.9 417 29.5
Gorai.006G168800 Gossypium raimondii HOM05D003265 ORTHO05D003819 3.4e-12 79.0 502 25.3
TPR.G36939 Trifolium pratense HOM05D003265 ORTHO05D003819 4.4e-12 78.6 503 27.0
AL5G34230 Arabidopsis lyrata HOM05D003265 ORTHO05D003819 5.8e-12 78.2 404 30.0
CSS0008335 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 7.6e-12 77.8 308 31.8
unitig_746.g26760 Utricularia gibba HOM05D003265 ORTHO05D003819 7.6e-12 77.8 81 51.9
Carub.0005s1987 Capsella rubella HOM05D003265 ORTHO05D003819 9.9e-12 77.4 455 28.6
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 1.7e-11 76.6 520 25.8
Medtr1g066870 Medicago truncatula HOM05D003265 ORTHO05D003819 2.2e-11 76.3 511 28.0
Gohir.D09G147700 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.9e-11 75.9 392 26.5
Hma1.2p1_0111F.1_g053890 Hydrangea macrophylla HOM05D003265 ORTHO05D003819 2.9e-11 75.9 135 39.3
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 4.9e-11 75.1 488 28.1
Sp4g19390 Schrenkiella parvula HOM05D003265 ORTHO05D003819 8.4e-11 74.3 526 24.5
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 5.4e-10 71.6 481 26.6
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 9.2e-10 70.9 576 26.0
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.2e-09 70.5 573 26.2
Aa31LG10G8510 Aethionema arabicum HOM05D003265 ORTHO05D003819 1.6e-09 70.1 421 26.8
BcaB06g28974 Brassica carinata HOM05D003265 ORTHO05D003819 1.6e-09 70.1 466 26.6
Actinidia13105 Actinidia chinensis HOM05D003265 ORTHO05D003819 2.1e-09 69.7 108 43.5
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 2.7e-09 69.3 447 27.1
Manes.09G080700 Manihot esculenta HOM05D003265 ORTHO05D003819 3.5e-09 68.9 403 26.8
Sed0024874 Sechium edule HOM05D003265 ORTHO05D003819 3.5e-09 68.9 474 28.1
TWI38G2066 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 3.5e-09 68.9 397 29.7
Zm00001eb322540 Zea mays HOM05D003265 ORTHO05D003819 3.5e-09 68.9 402 27.4
Aa31LG5G22370 Aethionema arabicum HOM05D003265 ORTHO05D003819 1.3e-08 67.0 465 28.0
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.3e-08 66.2 510 25.3
CARHR163240 Cardamine hirsuta HOM05D003265 ORTHO05D003819 2.3e-08 66.2 431 27.8
Carub.0004s1895 Capsella rubella HOM05D003265 ORTHO05D003819 6.6e-08 64.7 484 27.7
Sabra05G0023700 Salix brachista HOM05D003265 ORTHO05D003819 6.6e-08 64.7 49 69.4
Potri.008G044500 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.1e-07 63.9 551 27.9
CARHR131570 Cardamine hirsuta HOM05D003265 ORTHO05D003819 1.9e-07 63.2 521 26.9
Haze_16937 Corylus avellana HOM05D003265 ORTHO05D003819 1.9e-07 63.2 506 26.3
Sabra19G0043100 Salix brachista HOM05D003265 ORTHO05D010313 1.9e-07 63.2 91 47.3
Sabra19G0046300 Salix brachista HOM05D003265 ORTHO05D010313 1.9e-07 63.2 91 47.3
unitig_746.g26761 Utricularia gibba HOM05D003265 ORTHO05D003819 1.9e-07 63.2 358 27.9
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.5e-07 62.8 482 26.1
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 4.3e-07 62.0 480 26.5
BcaB01g00290 Brassica carinata HOM05D003265 ORTHO05D003819 9.6e-07 60.8 401 27.9
A09p46340 Brassica napus HOM05D003265 ORTHO05D003819 1.6e-06 60.1 398 26.6
BraA09t40099Z Brassica rapa HOM05D003265 ORTHO05D003819 1.6e-06 60.1 399 26.6
Lj3P979T38 Lonicera japonica HOM05D003265 ORTHO05D003819 1.6e-06 60.1 109 42.2
Sp5g09010 Schrenkiella parvula HOM05D003265 ORTHO05D003819 2.8e-06 59.3 406 26.6
THA.LOC104806495 Tarenaya hassleriana HOM05D003265 ORTHO05D003819 3.6e-06 58.9 624 24.5
MELO3C025500.2 Cucumis melo HOM05D003265 ORTHO05D003819 8.1e-06 57.8 410 27.1


User provided reference genes

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