Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 9.9e-141 503.4 254 100.0
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 2.5e-91 339.3 162 99.4
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 7.9e-90 334.3 197 80.2
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 5.1e-89 331.6 224 71.4
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 1.5e-88 330.1 210 74.3
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 3.3e-88 328.9 237 67.9
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 4.4e-88 328.6 225 71.1
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 3.7e-87 325.5 220 70.0
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 4.8e-87 325.1 218 69.3
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 8.2e-87 324.3 254 65.4
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 1.1e-86 323.9 208 75.5
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 1.8e-86 323.2 234 67.5
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 2.4e-86 322.8 259 62.5
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 3.1e-86 322.4 252 65.1
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 4.1e-86 322.0 227 69.6
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 4.1e-86 322.0 227 69.6
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 7.0e-86 321.2 255 65.1
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 7.0e-86 321.2 256 63.7
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 1.6e-85 320.1 240 65.4
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 3.5e-85 318.9 247 66.4
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 3.5e-85 318.9 229 65.9
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 4.5e-85 318.5 228 69.3
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 7.7e-85 317.8 220 69.5
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 7.7e-85 317.8 266 63.2
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 1.0e-84 317.4 205 73.7
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.3e-84 317.0 234 66.7
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 2.2e-84 316.2 200 74.5
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 2.2e-84 316.2 220 67.7
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 2.9e-84 315.8 258 62.0
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 3.8e-84 315.5 249 65.1
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.8e-84 315.5 252 64.3
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 3.8e-84 315.5 235 67.7
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 6.5e-84 314.7 259 60.6
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 8.5e-84 314.3 197 75.6
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 1.1e-83 313.9 229 66.8
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.9e-83 313.2 259 60.6
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 1.9e-83 313.2 243 64.2
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.9e-83 313.2 197 75.6
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.9e-83 313.2 225 69.3
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 2.5e-83 312.8 228 68.9
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.5e-83 312.8 197 75.1
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.2e-83 312.4 204 71.1
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 3.2e-83 312.4 249 63.9
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 4.2e-83 312.0 252 63.9
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.2e-83 312.0 252 63.9
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.5e-83 311.6 220 69.1
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 5.5e-83 311.6 237 63.3
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 5.5e-83 311.6 221 69.7
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 5.5e-83 311.6 258 60.5
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 7.2e-83 311.2 240 65.4
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 9.4e-83 310.8 250 64.8
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 1.2e-82 310.5 250 64.4
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 2.1e-82 309.7 245 65.3
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 4.7e-82 308.5 221 68.8
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 4.7e-82 308.5 215 68.8
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 8.0e-82 307.8 192 75.0
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 1.8e-81 306.6 228 65.8
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 2.3e-81 306.2 266 60.5
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 5.2e-81 305.1 270 57.4
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 8.8e-81 304.3 257 61.1
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 2.0e-80 303.1 215 67.4
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 3.3e-80 302.4 194 72.7
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 4.4e-80 302.0 204 71.1
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 5.7e-80 301.6 211 69.7
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 7.5e-80 301.2 218 67.0
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 7.5e-80 301.2 256 60.2
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 1.3e-79 300.4 217 65.0
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 1.7e-79 300.1 254 60.2
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 3.7e-79 298.9 191 72.8
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 4.8e-79 298.5 263 60.1
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 4.8e-79 298.5 211 67.8
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 6.3e-79 298.1 255 62.0
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 1.1e-78 297.4 225 65.3
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 1.8e-78 296.6 259 61.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 2.4e-78 296.2 235 62.6
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 4.1e-78 295.4 253 59.3
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 2.0e-77 293.1 204 67.2
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.7e-77 292.7 190 71.6
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 2.7e-77 292.7 212 67.5
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 4.5e-77 292.0 224 64.3
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 5.9e-77 291.6 160 81.2
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 7.7e-77 291.2 190 70.0
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 1.0e-76 290.8 233 61.4
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 2.2e-76 289.7 240 58.3
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 2.2e-76 289.7 240 58.3
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 2.9e-76 289.3 235 59.1
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 5.0e-76 288.5 190 69.5
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 6.5e-76 288.1 240 59.6
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 1.1e-75 287.3 236 59.7
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 1.1e-75 287.3 240 59.2
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.1e-75 287.3 190 70.5
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 1.1e-75 287.3 238 61.8
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 1.1e-75 287.3 259 57.1
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 1.5e-75 287.0 250 57.6
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 7.2e-75 284.6 240 58.8
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 9.4e-75 284.3 200 66.5
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.6e-74 283.5 160 77.5
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 2.7e-74 282.7 155 81.9
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 3.6e-74 282.3 245 58.0
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.0e-74 281.2 229 64.6
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 8.0e-74 281.2 183 69.9
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 2.6e-72 276.2 227 61.2
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 9.8e-72 274.2 211 63.0
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 2.4e-70 269.6 251 59.0
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 7.0e-70 268.1 233 58.8
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 9.1e-70 267.7 195 66.2
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 1.6e-69 266.9 211 62.6
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 4.5e-69 265.4 204 60.8
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.5e-69 265.4 252 57.5
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 4.5e-69 265.4 184 67.9
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 5.9e-69 265.0 222 61.3
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 2.2e-68 263.1 206 63.1
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 3.8e-68 262.3 197 65.5
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 7.2e-67 258.1 267 52.8
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 2.7e-66 256.1 254 53.9
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 3.0e-65 252.7 163 74.2
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 2.8e-63 246.1 265 52.8
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 3.1e-62 242.7 208 57.2
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 3.0e-57 226.1 149 72.5
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 6.4e-55 218.4 228 46.9
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 7.8e-53 211.5 228 52.6
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 6.8e-49 198.4 131 66.4
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 4.4e-48 195.7 147 65.3
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 9.2e-46 188.0 216 44.0
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.5e-45 186.0 103 79.6
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 3.9e-44 182.6 101 79.2
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-43 181.0 170 58.2
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 4.6e-37 159.1 108 64.8
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 5.1e-28 129.0 103 64.1
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.6e-28 128.6 101 60.4
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.9e-27 127.1 100 65.0
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.8e-26 123.2 190 38.9
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.6e-26 122.9 155 49.7
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 6.9e-25 118.6 159 40.3
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 4.2e-22 109.4 69 76.8
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 2.1e-21 107.1 176 42.0
Peaxi162Scf01517g00138 Petunia axillaris HOM05D007024 ORTHO05D008865 1.3e-18 97.8 193 32.6
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 4.8e-18 95.9 53 83.0
Aqoxy4G03151 Aquilegia oxysepala HOM05D007024 ORTHO05D008865 8.1e-18 95.1 259 28.6
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 2.0e-16 90.5 133 38.3
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 1.2e-13 81.3 54 72.2
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 1.0e-12 78.2 121 35.5
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 1.9e-11 73.9 132 31.8
Cre06.g278096 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 4.3e-11 72.8 125 30.4
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 1.5e-08 64.3 263 23.6
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 8.4e-07 58.5 44 59.1
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 2.4e-06 57.0 158 29.1
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 3.2e-06 56.6 37 67.6
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 3.2e-06 56.6 158 27.8
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 5.5e-06 55.8 60 48.3


User provided reference genes

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