Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014927 Daucus carota HOM05D002291 ORTHO05D002496 4.3e-158 561.2 274 100.0
DCAR_014928 Daucus carota HOM05D002291 ORTHO05D002496 1.8e-111 406.4 274 78.1
DCAR_014929 Daucus carota HOM05D002291 ORTHO05D002496 2.0e-102 376.3 274 73.4
DCAR_014926 Daucus carota HOM05D002291 ORTHO05D002496 9.3e-44 181.4 87 100.0
DCAR_014925 Daucus carota HOM05D002291 ORTHO05D002496 1.3e-34 151.0 82 86.6
Peaxi162Scf00347g00003 Petunia axillaris HOM05D002291 ORTHO05D002496 3.4e-30 136.3 243 35.8
FAN28G2256 Fragaria x ananassa HOM05D002291 ORTHO05D002496 3.2e-28 129.8 248 35.5
FAN23G1656 Fragaria x ananassa HOM05D002291 ORTHO05D000222 5.1e-26 122.5 259 35.1
FAN19G2591 Fragaria x ananassa HOM05D002291 ORTHO05D002496 2.5e-25 120.2 243 33.7
FAN26G0066 Fragaria x ananassa HOM05D002291 ORTHO05D002496 1.6e-24 117.5 289 33.2
Nitab4.5_0001151g0160 Nicotiana tabacum HOM05D002291 ORTHO05D002496 4.1e-23 112.8 250 32.0
Peaxi162Scf00347g00021 Petunia axillaris HOM05D002291 ORTHO05D002496 2.0e-22 110.5 239 31.8
FAN19G2875 Fragaria x ananassa HOM05D002291 ORTHO05D002496 2.2e-21 107.1 256 29.7
Nitab4.5_0005384g0020 Nicotiana tabacum HOM05D002291 ORTHO05D002496 5.5e-20 102.4 237 31.2
Haze_19315 Corylus avellana HOM05D002291 ORTHO05D002496 2.8e-16 90.1 81 53.1
Manes.14G139050 Manihot esculenta HOM05D002291 ORTHO05D002496 4.8e-16 89.4 79 54.4
Cfa020886 Carpinus fangiana HOM05D002291 ORTHO05D002496 6.3e-16 89.0 106 49.1
Eucgr.C00433 Eucalyptus grandis HOM05D002291 ORTHO05D002496 2.4e-15 87.0 77 53.2
Thecc.09G142200 Theobroma cacao HOM05D002291 ORTHO05D002496 2.4e-15 87.0 76 52.6
Haze_18941 Corylus avellana HOM05D002291 ORTHO05D002496 6.9e-15 85.5 76 52.6
Cpa.g.sc46.89 Carica papaya HOM05D002291 ORTHO05D002496 1.2e-14 84.7 83 48.2
Hma1.2p1_0182F.1_g080530 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.5e-14 84.3 84 50.0
Solyc07g007080.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 1.5e-14 84.3 79 53.2
PGSC0003DMG400030749 Solanum tuberosum HOM05D002291 ORTHO05D002496 2.0e-14 84.0 79 53.2
Hma1.2p1_1784F.1_g302180 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 4.5e-14 82.8 79 50.6
Hma1.2p1_2402F.1_g321405 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 4.5e-14 82.8 79 50.6
Nitab4.5_0001021g0030 Nicotiana tabacum HOM05D002291 ORTHO05D002496 4.5e-14 82.8 79 51.9
Peaxi162Scf00347g00011 Petunia axillaris HOM05D002291 ORTHO05D002496 4.5e-14 82.8 79 46.8
PGSC0003DMG400030739 Solanum tuberosum HOM05D002291 ORTHO05D002496 7.7e-14 82.0 79 49.4
Eucgr.C00431 Eucalyptus grandis HOM05D002291 ORTHO05D002496 1.0e-13 81.6 83 47.0
COL.COLO4_24095 Corchorus olitorius HOM05D002291 ORTHO05D002496 1.3e-13 81.3 88 47.7
Potri.018G113901 Populus trichocarpa HOM05D002291 ORTHO05D002496 2.2e-13 80.5 75 50.7
Eucgr.C00432 Eucalyptus grandis HOM05D002291 ORTHO05D002496 2.9e-13 80.1 85 45.9
Gohir.D06G048932 Gossypium hirsutum HOM05D002291 ORTHO05D002496 2.9e-13 80.1 79 51.9
Gorai.010G055400 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.9e-13 80.1 79 51.9
Gohir.D06G049025 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.8e-13 79.7 83 49.4
Gorai.010G055600 Gossypium raimondii HOM05D002291 ORTHO05D002496 3.8e-13 79.7 83 49.4
Oeu040786.1 Olea europaea HOM05D002291 ORTHO05D002496 3.8e-13 79.7 82 52.4
Phvul.003G175000 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 3.8e-13 79.7 83 49.4
Gohir.A06G049366 Gossypium hirsutum HOM05D002291 ORTHO05D002496 5.0e-13 79.3 79 51.9
Migut.K00370 Erythranthe guttata HOM05D002291 ORTHO05D002496 6.5e-13 79.0 84 47.6
COL.COLO4_24090 Corchorus olitorius HOM05D002291 ORTHO05D002496 1.1e-12 78.2 79 50.6
Actinidia04248 Actinidia chinensis HOM05D002291 ORTHO05D002496 1.4e-12 77.8 83 45.8
RcHm_v2.0_Chr2g0086601 Rosa chinensis HOM05D002291 ORTHO05D002496 1.4e-12 77.8 73 54.8
Eucgr.C00430 Eucalyptus grandis HOM05D002291 ORTHO05D002496 1.9e-12 77.4 73 49.3
Gohir.A06G049449 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.2e-12 76.6 79 50.6
Glyma.17G104700 Glycine max HOM05D002291 ORTHO05D002496 4.2e-12 76.3 92 46.7
Migut.K00373 Erythranthe guttata HOM05D002291 ORTHO05D002496 5.5e-12 75.9 84 44.0
Gohir.D06G049075 Gossypium hirsutum HOM05D002291 ORTHO05D002496 5.5e-12 75.9 83 45.8
Gorai.010G055800 Gossypium raimondii HOM05D002291 ORTHO05D002496 5.5e-12 75.9 83 45.8
MD15G1159300 Malus domestica HOM05D002291 ORTHO05D002496 7.2e-12 75.5 92 48.9
Migut.K00372 Erythranthe guttata HOM05D002291 ORTHO05D002496 9.4e-12 75.1 78 47.4
Gohir.D06G049050 Gossypium hirsutum HOM05D002291 ORTHO05D002496 9.4e-12 75.1 80 47.5
Medtr4g116640 Medicago truncatula HOM05D002291 ORTHO05D002496 9.4e-12 75.1 85 43.5
Prupe.7G254000 Prunus persica HOM05D002291 ORTHO05D002496 9.4e-12 75.1 77 51.9
RcHm_v2.0_Chr2g0086611 Rosa chinensis HOM05D002291 ORTHO05D002496 9.4e-12 75.1 103 44.7
Glyma.13G157100 Glycine max HOM05D002291 ORTHO05D002496 2.1e-11 73.9 84 46.4
MD15G1159200 Malus domestica HOM05D002291 ORTHO05D002496 2.1e-11 73.9 80 51.2
Gohir.D06G048900 Gossypium hirsutum HOM05D002291 ORTHO05D002496 2.7e-11 73.6 78 48.7
Gorai.010G055300 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.7e-11 73.6 77 49.4
MD15G1158800 Malus domestica HOM05D002291 ORTHO05D002496 2.7e-11 73.6 82 48.8
Prupe.7G254200 Prunus persica HOM05D002291 ORTHO05D002496 2.7e-11 73.6 90 47.8
Gohir.D06G048866 Gossypium hirsutum HOM05D002291 ORTHO05D002496 4.7e-11 72.8 77 49.4
Gorai.010G055100 Gossypium raimondii HOM05D002291 ORTHO05D002496 4.7e-11 72.8 78 47.4
Medtr4g116620 Medicago truncatula HOM05D002291 ORTHO05D002496 4.7e-11 72.8 77 45.5
Prupe.7G254100 Prunus persica HOM05D002291 ORTHO05D002496 4.7e-11 72.8 79 53.2
Ciclev10010646m.g Citrus clementina HOM05D002291 ORTHO05D002496 6.1e-11 72.4 73 52.1
FAN28G1283 Fragaria x ananassa HOM05D002291 ORTHO05D002496 6.1e-11 72.4 73 50.7
Gohir.A06G049200 Gossypium hirsutum HOM05D002291 ORTHO05D002496 6.1e-11 72.4 78 47.4
Gorai.010G055700 Gossypium raimondii HOM05D002291 ORTHO05D002496 6.1e-11 72.4 80 46.2
RcHm_v2.0_Chr2g0086591 Rosa chinensis HOM05D002291 ORTHO05D002496 6.1e-11 72.4 81 49.4
Manes.14G139301 Manihot esculenta HOM05D002291 ORTHO05D002496 7.9e-11 72.0 82 50.0
FvH4_1g01650 Fragaria vesca HOM05D002291 ORTHO05D002496 1.0e-10 71.6 70 52.9
Gohir.A06G049615 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.0e-10 71.6 70 51.4
RcHm_v2.0_Chr2g0086581 Rosa chinensis HOM05D002291 ORTHO05D002496 1.0e-10 71.6 74 48.6
Solyc07g007100.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 1.0e-10 71.6 78 50.0
Prupe.1G525100 Prunus persica HOM05D002291 ORTHO05D002496 1.4e-10 71.2 88 46.6
Potri.006G189700 Populus trichocarpa HOM05D002291 ORTHO05D002496 1.8e-10 70.9 79 43.0
Prupe.7G253900 Prunus persica HOM05D002291 ORTHO05D002496 2.3e-10 70.5 78 52.6
Prupe.7G254300 Prunus persica HOM05D002291 ORTHO05D002496 2.3e-10 70.5 64 54.7
RcHm_v2.0_Chr2g0086491 Rosa chinensis HOM05D002291 ORTHO05D002496 2.3e-10 70.5 79 44.3
Aqoxy6G00792 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.0e-10 70.1 95 36.8
Gohir.D13G208600 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.0e-10 70.1 96 44.8
Migut.K00374 Erythranthe guttata HOM05D002291 ORTHO05D002496 3.9e-10 69.7 78 44.9
FvH4_1g01670 Fragaria vesca HOM05D002291 ORTHO05D002496 3.9e-10 69.7 96 43.8
Potri.018G113700 Populus trichocarpa HOM05D002291 ORTHO05D002496 3.9e-10 69.7 66 53.0
PGR102G1132 Punica granatum HOM05D002291 ORTHO05D002496 3.9e-10 69.7 77 42.9
Gohir.A13G203300 Gossypium hirsutum HOM05D002291 ORTHO05D002496 5.1e-10 69.3 96 44.8
Gorai.013G237700 Gossypium raimondii HOM05D002291 ORTHO05D002496 6.7e-10 68.9 96 43.8
Nitab4.5_0001021g0010 Nicotiana tabacum HOM05D002291 ORTHO05D002496 1.1e-09 68.2 75 46.7
FvH4_1g01630 Fragaria vesca HOM05D002291 ORTHO05D002496 1.5e-09 67.8 69 49.3
Actinidia38701 Actinidia chinensis HOM05D002291 ORTHO05D002496 2.0e-09 67.4 68 47.1
CANSAT11G1356 Cannabis sativa HOM05D002291 ORTHO05D002496 2.0e-09 67.4 61 50.8
QL02p091368 Quercus lobata HOM05D002291 ORTHO05D002496 2.0e-09 67.4 79 45.6
FvH4_1g01640 Fragaria vesca HOM05D002291 ORTHO05D002496 2.6e-09 67.0 75 42.7
MD15G1159500 Malus domestica HOM05D002291 ORTHO05D002496 2.6e-09 67.0 78 48.7
Nn2g12256 Nelumbo nucifera HOM05D002291 ORTHO05D002496 3.3e-09 66.6 69 47.8
Sabra18G0096600 Salix brachista HOM05D002291 ORTHO05D002496 4.4e-09 66.2 72 47.2
COL.COLO4_24097 Corchorus olitorius HOM05D002291 ORTHO05D002496 5.7e-09 65.9 88 42.0
Dinv41421 Davidia involucrata HOM05D002291 ORTHO05D002496 5.7e-09 65.9 45 66.7
Prupe.7G254400 Prunus persica HOM05D002291 ORTHO05D002496 5.7e-09 65.9 82 47.6
ATR0629G115 Amborella trichopoda HOM05D002291 ORTHO05D002496 7.4e-09 65.5 61 49.2
Aqoxy7G03523 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 7.4e-09 65.5 83 39.8
MD15G1158700 Malus domestica HOM05D002291 ORTHO05D002496 7.4e-09 65.5 74 50.0
Potri.006G189600 Populus trichocarpa HOM05D002291 ORTHO05D002496 7.4e-09 65.5 77 45.5
FvH4_1g01620 Fragaria vesca HOM05D002291 ORTHO05D002496 9.7e-09 65.1 91 47.3
RcHm_v2.0_Chr2g0086641 Rosa chinensis HOM05D002291 ORTHO05D002496 9.7e-09 65.1 63 49.2
ECA236G3823 Erigeron canadensis HOM05D000006 ORTHO05D010593 1.3e-08 64.7 116 36.2
TPR.G15806 Trifolium pratense HOM05D002291 ORTHO05D002496 1.7e-08 64.3 77 39.0
Migut.K00371 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.2e-08 63.9 76 47.4
FAN23G1547 Fragaria x ananassa HOM05D002291 ORTHO05D002496 2.8e-08 63.5 58 51.7
QL02p091378 Quercus lobata HOM05D002291 ORTHO05D002496 2.8e-08 63.5 97 38.1
Aqoxy6G02828 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.7e-08 63.2 71 35.2
BcaC01g05064 Brassica carinata HOM05D002291 ORTHO05D002496 3.7e-08 63.2 80 41.2
BcaC01g05065 Brassica carinata HOM05D002291 ORTHO05D002496 3.7e-08 63.2 80 41.2
C03p30620 Brassica napus HOM05D002291 ORTHO05D002496 3.7e-08 63.2 80 42.5
BolC3t15412H Brassica oleracea HOM05D002291 ORTHO05D002496 3.7e-08 63.2 80 41.2
FAN28G2220 Fragaria x ananassa HOM05D002291 ORTHO05D002496 3.7e-08 63.2 54 50.0
MD15G1158900 Malus domestica HOM05D002291 ORTHO05D002496 3.7e-08 63.2 85 42.4
MD15G1159000 Malus domestica HOM05D002291 ORTHO05D002496 3.7e-08 63.2 85 42.4
CiPaw.16G117500 Carya illinoinensis HOM05D002291 ORTHO05D002496 4.8e-08 62.8 70 42.9
FAN23G0828 Fragaria x ananassa HOM05D002291 ORTHO05D002496 4.8e-08 62.8 52 50.0
Ciclev10010215m.g Citrus clementina HOM05D002291 ORTHO05D002496 6.3e-08 62.4 72 43.1
Aqoxy7G03527 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 1.1e-07 61.6 79 32.9
Gohir.A06G049700 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.4e-07 61.2 78 43.6
Atru.chr7.210 Acer truncatum HOM05D002291 ORTHO05D002496 1.8e-07 60.8 84 42.9
Aqoxy7G03526 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 1.8e-07 60.8 76 38.2
BcaC02g12525 Brassica carinata HOM05D002291 ORTHO05D002496 1.8e-07 60.8 84 40.5
A05p01310 Brassica napus HOM05D002291 ORTHO05D002496 1.8e-07 60.8 84 40.5
C04p01440 Brassica napus HOM05D002291 ORTHO05D002496 1.8e-07 60.8 84 40.5
BolC4t21798H Brassica oleracea HOM05D002291 ORTHO05D002496 1.8e-07 60.8 84 40.5
BraA05t19129Z Brassica rapa HOM05D002291 ORTHO05D002496 1.8e-07 60.8 84 40.5
Dinv43189 Davidia involucrata HOM05D002291 ORTHO05D002496 1.8e-07 60.8 78 42.3
ECA240G4705 Erigeron canadensis HOM05D002291 ORTHO05D002496 1.8e-07 60.8 85 37.6
Hma1.2p1_0182F.1_g080520 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.8e-07 60.8 45 62.2
Migut.J01277 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.4e-07 60.5 76 39.5
Nn8g39724 Nelumbo nucifera HOM05D002291 ORTHO05D002496 2.4e-07 60.5 71 38.0
CiPaw.15G181200 Carya illinoinensis HOM05D002291 ORTHO05D002496 3.1e-07 60.1 78 42.3
MBI15_g31410_MAGBIO Magnolia biondii HOM05D002291 ORTHO05D002496 3.1e-07 60.1 74 48.6
Sp4g28490 Schrenkiella parvula HOM05D002291 ORTHO05D002496 4.1e-07 59.7 86 39.5
TWI34G1223 Tripterygium wilfordii HOM05D002291 ORTHO05D002496 4.1e-07 59.7 76 39.5
BcaB01g03214 Brassica carinata HOM05D002291 ORTHO05D002496 6.9e-07 58.9 80 41.2
Manes.14G139400 Manihot esculenta HOM05D002291 ORTHO05D002496 6.9e-07 58.9 82 42.7
Nn2g12255 Nelumbo nucifera HOM05D002291 ORTHO05D002496 9.1e-07 58.5 70 37.1
Oeu052182.1 Olea europaea HOM05D002291 ORTHO05D002496 9.1e-07 58.5 69 44.9
PSO832G3277 Papaver somniferum HOM05D002291 ORTHO05D002496 9.1e-07 58.5 40 57.5
Glyma.15G202600 Glycine max HOM05D002291 ORTHO05D002496 1.2e-06 58.2 81 34.6
CARHR141790 Cardamine hirsuta HOM05D002291 ORTHO05D002496 1.5e-06 57.8 74 40.5
Cfa020885 Carpinus fangiana HOM05D002291 ORTHO05D002496 1.5e-06 57.8 82 36.6
Migut.K00368 Erythranthe guttata HOM05D002291 ORTHO05D002496 1.5e-06 57.8 77 41.6
Hma1.2p1_0182F.1_g080570 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.5e-06 57.8 75 42.7
Cpa.g.sc46.90 Carica papaya HOM05D002291 ORTHO05D002496 2.0e-06 57.4 73 39.7
TAR626G1664 Trochodendron aralioides HOM05D002291 ORTHO05D002496 2.0e-06 57.4 41 58.5
Aqoxy7G03977 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 2.6e-06 57.0 71 32.4
BcaNung05602 Brassica carinata HOM05D002291 ORTHO05D002496 2.6e-06 57.0 85 38.8
Migut.K00369 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.6e-06 57.0 64 45.3
MD02G1012800 Malus domestica HOM05D002291 ORTHO05D002496 3.4e-06 56.6 115 30.4
Phvul.009G209300 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 3.4e-06 56.6 81 37.0
Prupe.7G253800 Prunus persica HOM05D002291 ORTHO05D002496 3.4e-06 56.6 71 39.4
SalBow1G0319 Salvia bowleyana HOM05D002291 ORTHO05D002496 3.4e-06 56.6 66 43.9
EL10Ac8g18812 Beta vulgaris HOM05D002291 ORTHO05D002496 4.5e-06 56.2 66 45.5
Glyma.09G094900 Glycine max HOM05D002291 ORTHO05D002496 4.5e-06 56.2 82 32.9
MD15G1158600 Malus domestica HOM05D002291 ORTHO05D002496 4.5e-06 56.2 78 38.5
Oeu038253.1 Olea europaea HOM05D002291 ORTHO05D002496 4.5e-06 56.2 84 38.1
CANSAT11G0551 Cannabis sativa HOM05D002291 ORTHO05D002496 5.9e-06 55.8 70 38.6
CsaV3_1G028530 Cucumis sativus L. HOM05D002291 ORTHO05D002496 5.9e-06 55.8 73 38.4
AL4G45830 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 40.3
AL4G45850 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 40.3
AL4G45870 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 40.3
AL4G45890 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 40.3
AT2G46490 Arabidopsis thaliana HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 40.3
A03p25670 Brassica napus HOM05D002291 ORTHO05D002496 7.7e-06 55.5 83 37.3
BraA03t11782Z Brassica rapa HOM05D002291 ORTHO05D002496 7.7e-06 55.5 83 37.3
Lj5g0000889 Lotus japonicus HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 37.7
Sed0005811 Sechium edule HOM05D002291 ORTHO05D002496 7.7e-06 55.5 77 37.7


User provided reference genes

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