Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014925 Daucus carota HOM05D002291 ORTHO05D002496 3.5e-55 218.0 106 100.0
DCAR_014926 Daucus carota HOM05D002291 ORTHO05D002496 4.0e-35 151.4 82 86.6
DCAR_014927 Daucus carota HOM05D002291 ORTHO05D002496 4.0e-35 151.4 82 86.6
DCAR_014928 Daucus carota HOM05D002291 ORTHO05D002496 4.0e-35 151.4 82 86.6
DCAR_014929 Daucus carota HOM05D002291 ORTHO05D002496 6.6e-30 134.0 82 74.4
Haze_19315 Corylus avellana HOM05D002291 ORTHO05D002496 2.4e-16 89.0 101 44.6
Manes.14G139050 Manihot esculenta HOM05D002291 ORTHO05D002496 5.4e-16 87.8 75 54.7
Cpa.g.sc46.89 Carica papaya HOM05D002291 ORTHO05D002496 1.7e-14 82.8 81 45.7
Cfa020886 Carpinus fangiana HOM05D002291 ORTHO05D002496 3.9e-14 81.6 83 54.2
Eucgr.C00432 Eucalyptus grandis HOM05D002291 ORTHO05D002496 3.9e-14 81.6 88 46.6
Peaxi162Scf00347g00011 Petunia axillaris HOM05D002291 ORTHO05D002496 3.9e-14 81.6 85 44.7
Eucgr.C00431 Eucalyptus grandis HOM05D002291 ORTHO05D002496 6.6e-14 80.9 79 48.1
Haze_18941 Corylus avellana HOM05D002291 ORTHO05D002496 1.1e-13 80.1 72 50.0
PGSC0003DMG400030739 Solanum tuberosum HOM05D002291 ORTHO05D002496 1.1e-13 80.1 109 41.3
Nitab4.5_0001151g0160 Nicotiana tabacum HOM05D002291 ORTHO05D002496 1.5e-13 79.7 90 46.7
Hma1.2p1_0182F.1_g080530 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.9e-13 79.3 86 46.5
Nitab4.5_0001021g0030 Nicotiana tabacum HOM05D002291 ORTHO05D002496 3.3e-13 78.6 86 46.5
Oeu040786.1 Olea europaea HOM05D002291 ORTHO05D002496 3.3e-13 78.6 96 47.9
Thecc.09G142200 Theobroma cacao HOM05D002291 ORTHO05D002496 3.3e-13 78.6 85 43.5
Actinidia04248 Actinidia chinensis HOM05D002291 ORTHO05D002496 7.3e-13 77.4 95 41.1
Solyc07g007080.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 7.3e-13 77.4 89 41.6
Eucgr.C00433 Eucalyptus grandis HOM05D002291 ORTHO05D002496 9.5e-13 77.0 77 48.1
PGSC0003DMG400030749 Solanum tuberosum HOM05D002291 ORTHO05D002496 9.5e-13 77.0 89 41.6
Nitab4.5_0005384g0020 Nicotiana tabacum HOM05D002291 ORTHO05D002496 4.7e-12 74.7 94 42.6
Phvul.003G175000 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 4.7e-12 74.7 80 43.8
RcHm_v2.0_Chr2g0086491 Rosa chinensis HOM05D002291 ORTHO05D002496 6.2e-12 74.3 74 48.6
Potri.018G113901 Populus trichocarpa HOM05D002291 ORTHO05D002496 8.1e-12 73.9 75 45.3
Gohir.D06G048932 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.1e-11 73.6 84 45.2
Gorai.010G055400 Gossypium raimondii HOM05D002291 ORTHO05D002496 1.1e-11 73.6 84 45.2
Ciclev10010646m.g Citrus clementina HOM05D002291 ORTHO05D002496 1.4e-11 73.2 99 43.4
COL.COLO4_24095 Corchorus olitorius HOM05D002291 ORTHO05D002496 1.4e-11 73.2 95 44.2
Hma1.2p1_1784F.1_g302180 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.4e-11 73.2 89 42.7
Hma1.2p1_2402F.1_g321405 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 1.4e-11 73.2 89 42.7
Peaxi162Scf00347g00003 Petunia axillaris HOM05D002291 ORTHO05D002496 1.4e-11 73.2 84 41.7
Gohir.A06G049366 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.8e-11 72.8 84 45.2
Gorai.010G055300 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.3e-11 72.4 78 48.7
Gohir.D06G049025 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.1e-11 72.0 87 43.7
Gohir.D06G049050 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.1e-11 72.0 83 43.4
Gorai.010G055600 Gossypium raimondii HOM05D002291 ORTHO05D002496 3.1e-11 72.0 87 43.7
RcHm_v2.0_Chr2g0086611 Rosa chinensis HOM05D002291 ORTHO05D002496 3.1e-11 72.0 87 43.7
Gohir.D06G048866 Gossypium hirsutum HOM05D002291 ORTHO05D002496 4.0e-11 71.6 78 48.7
Migut.K00373 Erythranthe guttata HOM05D002291 ORTHO05D002496 5.2e-11 71.2 82 42.7
Medtr4g116640 Medicago truncatula HOM05D002291 ORTHO05D002496 5.2e-11 71.2 73 43.8
Peaxi162Scf00347g00021 Petunia axillaris HOM05D002291 ORTHO05D002496 5.2e-11 71.2 75 42.7
COL.COLO4_24090 Corchorus olitorius HOM05D002291 ORTHO05D002496 6.8e-11 70.9 89 43.8
RcHm_v2.0_Chr2g0086591 Rosa chinensis HOM05D002291 ORTHO05D002496 6.8e-11 70.9 90 44.4
FAN19G2875 Fragaria x ananassa HOM05D002291 ORTHO05D002496 8.9e-11 70.5 77 45.5
FAN28G2256 Fragaria x ananassa HOM05D002291 ORTHO05D002496 8.9e-11 70.5 77 45.5
Glyma.13G157100 Glycine max HOM05D002291 ORTHO05D002496 8.9e-11 70.5 81 42.0
Gohir.A06G049449 Gossypium hirsutum HOM05D002291 ORTHO05D002496 8.9e-11 70.5 84 44.0
Migut.K00370 Erythranthe guttata HOM05D002291 ORTHO05D002496 1.2e-10 70.1 81 43.2
Gohir.D06G049075 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.2e-10 70.1 83 42.2
Gorai.010G055800 Gossypium raimondii HOM05D002291 ORTHO05D002496 1.2e-10 70.1 83 42.2
Medtr4g116620 Medicago truncatula HOM05D002291 ORTHO05D002496 1.2e-10 70.1 73 43.8
RcHm_v2.0_Chr2g0086581 Rosa chinensis HOM05D002291 ORTHO05D002496 1.2e-10 70.1 85 43.5
RcHm_v2.0_Chr2g0086601 Rosa chinensis HOM05D002291 ORTHO05D002496 1.2e-10 70.1 76 48.7
FAN28G1283 Fragaria x ananassa HOM05D002291 ORTHO05D002496 1.5e-10 69.7 73 49.3
Glyma.17G104700 Glycine max HOM05D002291 ORTHO05D002496 1.5e-10 69.7 79 45.6
Prupe.7G254300 Prunus persica HOM05D002291 ORTHO05D002496 1.5e-10 69.7 64 53.1
Migut.K00372 Erythranthe guttata HOM05D002291 ORTHO05D002496 2.0e-10 69.3 78 43.6
Eucgr.C00430 Eucalyptus grandis HOM05D002291 ORTHO05D002496 2.0e-10 69.3 73 43.8
Gorai.010G055700 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.0e-10 69.3 83 42.2
FvH4_1g01670 Fragaria vesca HOM05D002291 ORTHO05D002496 2.6e-10 68.9 89 41.6
FvH4_1g01640 Fragaria vesca HOM05D002291 ORTHO05D002496 3.4e-10 68.6 96 37.5
Potri.006G189700 Populus trichocarpa HOM05D002291 ORTHO05D002496 3.4e-10 68.6 82 40.2
Aqoxy6G00792 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 4.4e-10 68.2 88 39.8
FAN23G1656 Fragaria x ananassa HOM05D002291 ORTHO05D000222 4.4e-10 68.2 80 45.0
Potri.018G113700 Populus trichocarpa HOM05D002291 ORTHO05D002496 4.4e-10 68.2 86 45.3
MD15G1159300 Malus domestica HOM05D002291 ORTHO05D002496 5.8e-10 67.8 78 44.9
Prupe.7G254000 Prunus persica HOM05D002291 ORTHO05D002496 5.8e-10 67.8 86 46.5
FAN26G0066 Fragaria x ananassa HOM05D002291 ORTHO05D002496 7.6e-10 67.4 85 42.4
Gohir.A06G049615 Gossypium hirsutum HOM05D002291 ORTHO05D002496 7.6e-10 67.4 76 46.1
MD15G1158800 Malus domestica HOM05D002291 ORTHO05D002496 7.6e-10 67.4 74 47.3
Nn2g12256 Nelumbo nucifera HOM05D002291 ORTHO05D002496 7.6e-10 67.4 87 44.8
Nitab4.5_0001021g0010 Nicotiana tabacum HOM05D002291 ORTHO05D002496 7.6e-10 67.4 61 50.8
FvH4_1g01630 Fragaria vesca HOM05D002291 ORTHO05D002496 9.9e-10 67.0 69 46.4
Gohir.A06G049200 Gossypium hirsutum HOM05D002291 ORTHO05D002496 9.9e-10 67.0 87 40.2
Gohir.D06G048900 Gossypium hirsutum HOM05D002291 ORTHO05D002496 1.3e-09 66.6 87 41.4
Prupe.7G254200 Prunus persica HOM05D002291 ORTHO05D002496 1.3e-09 66.6 74 51.4
QL02p091368 Quercus lobata HOM05D002291 ORTHO05D002496 1.3e-09 66.6 77 45.5
Gorai.010G055100 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.2e-09 65.9 87 40.2
Gorai.013G237700 Gossypium raimondii HOM05D002291 ORTHO05D002496 2.9e-09 65.5 87 43.7
Aqoxy7G03527 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.8e-09 65.1 96 34.4
ECA236G3823 Erigeron canadensis HOM05D000006 ORTHO05D010593 3.8e-09 65.1 56 48.2
Migut.K00374 Erythranthe guttata HOM05D002291 ORTHO05D002496 3.8e-09 65.1 74 41.9
Prupe.7G253900 Prunus persica HOM05D002291 ORTHO05D002496 3.8e-09 65.1 92 47.8
Actinidia38701 Actinidia chinensis HOM05D002291 ORTHO05D002496 4.9e-09 64.7 68 42.6
MD15G1159200 Malus domestica HOM05D002291 ORTHO05D002496 4.9e-09 64.7 80 45.0
FvH4_1g01650 Fragaria vesca HOM05D002291 ORTHO05D002496 6.4e-09 64.3 87 44.8
FAN19G2591 Fragaria x ananassa HOM05D002291 ORTHO05D002496 6.4e-09 64.3 85 41.2
Prupe.7G254100 Prunus persica HOM05D002291 ORTHO05D002496 6.4e-09 64.3 89 44.9
Gohir.D13G208600 Gossypium hirsutum HOM05D002291 ORTHO05D002496 8.4e-09 63.9 87 42.5
Manes.14G139301 Manihot esculenta HOM05D002291 ORTHO05D002496 8.4e-09 63.9 82 45.1
Prupe.1G525100 Prunus persica HOM05D002291 ORTHO05D002496 8.4e-09 63.9 66 48.5
PGR102G1132 Punica granatum HOM05D002291 ORTHO05D002496 8.4e-09 63.9 77 37.7
FAN23G1547 Fragaria x ananassa HOM05D002291 ORTHO05D002496 1.9e-08 62.8 55 52.7
Potri.006G189600 Populus trichocarpa HOM05D002291 ORTHO05D002496 2.4e-08 62.4 100 39.0
Sabra18G0096600 Salix brachista HOM05D002291 ORTHO05D002496 2.4e-08 62.4 90 41.1
ATR0629G115 Amborella trichopoda HOM05D002291 ORTHO05D002496 3.2e-08 62.0 81 37.0
MD15G1159500 Malus domestica HOM05D002291 ORTHO05D002496 3.2e-08 62.0 90 42.2
Oeu052182.1 Olea europaea HOM05D002291 ORTHO05D002496 3.2e-08 62.0 64 46.9
CANSAT11G1356 Cannabis sativa HOM05D002291 ORTHO05D002496 4.1e-08 61.6 66 48.5
Gohir.A13G203300 Gossypium hirsutum HOM05D002291 ORTHO05D002496 4.1e-08 61.6 85 41.2
FvH4_1g01620 Fragaria vesca HOM05D002291 ORTHO05D002496 5.4e-08 61.2 85 40.0
RcHm_v2.0_Chr2g0086641 Rosa chinensis HOM05D002291 ORTHO05D002496 5.4e-08 61.2 64 43.8
Nn8g39724 Nelumbo nucifera HOM05D002291 ORTHO05D002496 9.2e-08 60.5 63 39.7
Aqoxy6G02828 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 1.2e-07 60.1 81 30.9
Dinv43189 Davidia involucrata HOM05D002291 ORTHO05D002496 1.2e-07 60.1 83 42.2
Solyc07g007100.1 Solanum lycopersicum HOM05D002291 ORTHO05D002496 1.2e-07 60.1 80 41.2
C03p30620 Brassica napus HOM05D002291 ORTHO05D002496 1.6e-07 59.7 86 37.2
Dinv41421 Davidia involucrata HOM05D002291 ORTHO05D002496 1.6e-07 59.7 40 62.5
MD15G1158700 Malus domestica HOM05D002291 ORTHO05D002496 1.6e-07 59.7 74 45.9
QL02p091378 Quercus lobata HOM05D002291 ORTHO05D002496 1.6e-07 59.7 77 40.3
Oeu038253.1 Olea europaea HOM05D002291 ORTHO05D002496 2.1e-07 59.3 84 39.3
Sabra06G0145800 Salix brachista HOM05D002291 ORTHO05D002496 2.1e-07 59.3 84 35.7
FAN23G0828 Fragaria x ananassa HOM05D002291 ORTHO05D002496 2.7e-07 58.9 61 44.3
TPR.G15806 Trifolium pratense HOM05D002291 ORTHO05D002496 2.7e-07 58.9 73 37.0
Aqoxy7G03523 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.5e-07 58.5 83 34.9
BcaC01g05064 Brassica carinata HOM05D002291 ORTHO05D002496 3.5e-07 58.5 81 37.0
BcaC01g05065 Brassica carinata HOM05D002291 ORTHO05D002496 3.5e-07 58.5 81 37.0
BolC3t15412H Brassica oleracea HOM05D002291 ORTHO05D002496 3.5e-07 58.5 81 37.0
CiPaw.16G117500 Carya illinoinensis HOM05D002291 ORTHO05D002496 3.5e-07 58.5 71 42.3
Migut.K00368 Erythranthe guttata HOM05D002291 ORTHO05D002496 3.5e-07 58.5 67 44.8
Nn2g12255 Nelumbo nucifera HOM05D002291 ORTHO05D002496 3.5e-07 58.5 68 36.8
Prupe.7G254400 Prunus persica HOM05D002291 ORTHO05D002496 3.5e-07 58.5 81 43.2
TWI34G1223 Tripterygium wilfordii HOM05D002291 ORTHO05D002496 3.5e-07 58.5 89 36.0
Migut.J01277 Erythranthe guttata HOM05D002291 ORTHO05D002496 4.6e-07 58.2 71 38.0
FvH4_1g01700 Fragaria vesca HOM05D002291 ORTHO05D002496 4.6e-07 58.2 82 48.8
Migut.K00371 Erythranthe guttata HOM05D002291 ORTHO05D002496 6.0e-07 57.8 90 38.9
HanXRQChr05g0143211 Helianthus annuus HOM05D002291 ORTHO05D002496 6.0e-07 57.8 65 40.0
Hma1.2p1_0182F.1_g080570 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 6.0e-07 57.8 75 41.3
SalBow1G0319 Salvia bowleyana HOM05D002291 ORTHO05D002496 6.0e-07 57.8 76 40.8
MD15G1158900 Malus domestica HOM05D002291 ORTHO05D002496 7.8e-07 57.4 86 41.9
MD15G1159000 Malus domestica HOM05D002291 ORTHO05D002496 7.8e-07 57.4 86 41.9
Manes.14G139400 Manihot esculenta HOM05D002291 ORTHO05D002496 7.8e-07 57.4 91 37.4
Aqoxy7G03977 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 1.0e-06 57.0 81 29.6
Ciclev10010215m.g Citrus clementina HOM05D002291 ORTHO05D002496 1.0e-06 57.0 62 45.2
COL.COLO4_24097 Corchorus olitorius HOM05D002291 ORTHO05D002496 1.0e-06 57.0 94 37.2
PSO832G3277 Papaver somniferum HOM05D002291 ORTHO05D002496 1.0e-06 57.0 40 55.0
CiPaw.15G181200 Carya illinoinensis HOM05D002291 ORTHO05D002496 1.3e-06 56.6 87 37.9
FAN28G2220 Fragaria x ananassa HOM05D002291 ORTHO05D002496 1.3e-06 56.6 57 43.9
BcaC02g12525 Brassica carinata HOM05D002291 ORTHO05D002496 1.7e-06 56.2 79 38.0
A05p01310 Brassica napus HOM05D002291 ORTHO05D002496 1.7e-06 56.2 79 38.0
C04p01440 Brassica napus HOM05D002291 ORTHO05D002496 1.7e-06 56.2 79 38.0
BolC4t21798H Brassica oleracea HOM05D002291 ORTHO05D002496 1.7e-06 56.2 79 38.0
BraA05t19129Z Brassica rapa HOM05D002291 ORTHO05D002496 1.7e-06 56.2 79 38.0
Atru.chr7.210 Acer truncatum HOM05D002291 ORTHO05D002496 2.3e-06 55.8 94 37.2
Gohir.A06G049700 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.0e-06 55.5 83 39.8
Hma1.2p1_0182F.1_g080520 Hydrangea macrophylla HOM05D002291 ORTHO05D002496 3.0e-06 55.5 40 60.0
Sp4g28490 Schrenkiella parvula HOM05D002291 ORTHO05D002496 3.0e-06 55.5 87 35.6
Sed0005811 Sechium edule HOM05D002291 ORTHO05D002496 3.0e-06 55.5 86 34.9
Aqoxy7G03526 Aquilegia oxysepala HOM05D002291 ORTHO05D002496 3.9e-06 55.1 72 34.7
BcaB01g03214 Brassica carinata HOM05D002291 ORTHO05D002496 3.9e-06 55.1 81 37.0
Migut.J01276 Erythranthe guttata HOM05D002291 ORTHO05D189699 5.1e-06 54.7 77 39.0
Migut.K00369 Erythranthe guttata HOM05D002291 ORTHO05D002496 5.1e-06 54.7 34 64.7
MBI15_g31410_MAGBIO Magnolia biondii HOM05D002291 ORTHO05D002496 5.1e-06 54.7 74 40.5
TAR626G1664 Trochodendron aralioides HOM05D002291 ORTHO05D002496 5.1e-06 54.7 37 59.5
CARHR141790 Cardamine hirsuta HOM05D002291 ORTHO05D002496 6.6e-06 54.3 97 35.1
Cfa020885 Carpinus fangiana HOM05D002291 ORTHO05D002496 6.6e-06 54.3 101 30.7
CAN.G518.9 Capsicum annuum HOM05D002291 ORTHO05D002496 8.6e-06 53.9 81 34.6
ECA240G4705 Erigeron canadensis HOM05D002291 ORTHO05D002496 8.6e-06 53.9 80 35.0
Glyma.15G202600 Glycine max HOM05D002291 ORTHO05D002496 8.6e-06 53.9 98 29.6
Lsat_1_v5_gn_7_47800 Lactuca sativa HOM05D002291 ORTHO05D002496 8.6e-06 53.9 59 50.8
PGSC0003DMG400030741 Solanum tuberosum HOM05D002291 ORTHO05D002496 8.6e-06 53.9 82 39.0
PGSC0003DMG400030742 Solanum tuberosum HOM05D002291 ORTHO05D002496 8.6e-06 53.9 82 39.0


User provided reference genes

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