Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 0.0e+00 2239.5 1148 100.0
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 0.0e+00 1135.9 1220 53.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 2.5e-308 1062.4 1173 49.6
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 1.2e-305 1053.5 1163 50.5
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 1.7e-304 1049.7 1161 49.2
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 6.6e-293 1011.1 1251 47.3
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 2.2e-280 969.5 1153 46.9
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.2e-278 963.8 1164 46.9
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 4.6e-278 961.8 1164 47.9
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 9.6e-276 954.1 1166 46.3
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 8.1e-275 951.0 1255 44.5
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 5.8e-273 944.9 1164 47.6
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 7.8e-270 934.5 1159 46.6
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 1.1e-268 930.6 1160 45.4
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.1e-268 930.6 1166 45.3
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.1e-268 930.6 1143 45.7
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 7.3e-268 927.9 1166 45.2
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 6.4e-264 914.8 1163 46.5
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 3.2e-263 912.5 1162 46.1
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 9.3e-263 911.0 1162 46.4
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 2.7e-262 909.4 1143 45.2
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 6.0e-262 908.3 1169 44.8
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 6.0e-262 908.3 1154 44.0
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 2.3e-261 906.4 1162 45.9
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 6.7e-261 904.8 1166 44.9
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.5e-260 903.7 1162 45.0
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 1.1e-258 897.5 1151 45.9
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.1e-258 897.5 1168 45.6
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 4.0e-258 895.6 1168 45.1
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 4.5e-257 892.1 1163 43.9
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 4.2e-255 885.6 1134 44.3
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 3.9e-253 879.0 1101 46.0
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 3.9e-253 879.0 1154 43.6
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 1.1e-250 870.9 1154 43.4
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 1.1e-250 870.9 1188 42.4
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 1.2e-249 867.5 1137 44.3
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 2.2e-248 863.2 1139 43.5
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 2.2e-248 863.2 1141 44.5
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 7.9e-246 854.7 1141 42.8
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 3.0e-245 852.8 985 47.8
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.5e-244 849.7 1043 45.8
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 7.4e-244 848.2 1130 43.0
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 2.4e-242 843.2 1136 42.8
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 4.1e-242 842.4 1157 43.7
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 1.0e-240 837.8 1135 42.8
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 2.2e-240 836.6 1164 42.3
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 6.5e-240 835.1 1171 43.1
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 6.3e-235 818.5 1163 43.0
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 2.6e-233 813.1 1193 40.9
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 2.2e-232 810.1 1013 44.7
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 6.5e-232 808.5 1144 43.3
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 4.2e-231 805.8 1163 41.0
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 2.2e-224 783.5 1168 40.9
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 2.7e-222 776.5 845 49.5
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 2.4e-218 763.5 1027 44.4
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 3.8e-208 729.6 857 48.2
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 8.5e-208 728.4 1186 39.2
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 2.8e-198 696.8 1158 38.9
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 3.2e-194 683.3 814 45.5
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.1e-183 648.3 870 43.7
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 2.5e-183 647.1 927 42.1
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 9.5e-175 618.6 854 42.9
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 5.2e-173 612.8 1028 37.2
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 2.4e-170 604.0 1098 37.2
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 7.8e-169 599.0 712 45.8
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 6.8e-165 585.9 682 45.9
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 5.8e-164 582.8 943 38.5
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 8.4e-163 578.9 1084 34.8
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 6.2e-158 562.8 866 40.5
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.6e-153 548.1 1210 31.8
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.1e-149 535.4 1162 35.1
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 7.6e-148 529.3 1162 34.1
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 1.9e-135 488.0 1015 32.4
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.2e-129 468.8 880 36.5
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 2.9e-107 394.4 419 53.2
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 1.5e-98 365.5 308 61.0
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.3e-88 331.6 322 57.5
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 7.3e-82 310.1 858 28.2
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.0e-72 279.6 273 56.4
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 9.8e-71 273.1 1123 24.7
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 6.6e-67 260.4 257 54.9
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 1.1e-64 253.1 203 61.1
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.9e-62 245.0 219 59.8
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 8.3e-62 243.4 333 44.1
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.2e-60 239.6 259 53.7
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 4.4e-55 221.1 452 32.1
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.7e-54 219.2 397 34.5
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.9e-51 208.0 215 55.8
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 1.1e-50 206.5 403 33.3
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.8e-48 199.1 411 31.6
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 5.1e-43 181.0 166 56.6
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 5.1e-43 181.0 166 56.6
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 2.1e-41 175.6 985 22.7
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 6.0e-36 157.5 225 42.7
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 1.8e-35 156.0 159 50.9
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 2.3e-35 155.6 162 55.6
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 5.6e-26 124.4 160 46.2
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 1.3e-25 123.2 101 66.3
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 3.7e-25 121.7 808 22.5
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 1.8e-24 119.4 85 68.2
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.3e-16 91.3 104 49.0


User provided reference genes

Program Settings